RNA–Protein interactions for RNA: ENST00000546983.1

NKX2-1-205, Transcript of NK2 homeobox 1, humanhuman

TSL 4

Gene NKX2-1, Length 653 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-205ENST00000546983 CLTCL1P53675 1640 aa37.41■■■■□ 3.58
NKX2-1-205ENST00000546983 ZNF326Q5BKZ1 582 aaKnown RBP37.41■■■■□ 3.58
NKX2-1-205ENST00000546983 RPGRIP1LQ68CZ1 1315 aa37.39■■■■□ 3.58
NKX2-1-205ENST00000546983 FOXD1Q16676 465 aa37.39■■■■□ 3.58
NKX2-1-205ENST00000546983 PLEKHG1Q9ULL1 1385 aa37.39■■■■□ 3.58
NKX2-1-205ENST00000546983 KIF1BO60333 1816 aa37.36■■■■□ 3.57
NKX2-1-205ENST00000546983 BCANQ96GW7 911 aa37.34■■■■□ 3.57
NKX2-1-205ENST00000546983 CERKQ8TCT0 537 aa37.32■■■■□ 3.56
NKX2-1-205ENST00000546983 ZNF335Q9H4Z2 1342 aaPredicted RBP37.31■■■■□ 3.56
NKX2-1-205ENST00000546983 VGFO15240 615 aaPredicted RBP37.3■■■■□ 3.56
NKX2-1-205ENST00000546983 MYO5BQ9ULV0 1848 aa37.29■■■■□ 3.56
NKX2-1-205ENST00000546983 CPS1P31327 1500 aa37.29■■■■□ 3.56
NKX2-1-205ENST00000546983 IQSEC2Q5JU85 1478 aa37.28■■■■□ 3.56
NKX2-1-205ENST00000546983 LTBP4Q8N2S1 1624 aa37.27■■■■□ 3.56
NKX2-1-205ENST00000546983 ANKRD30BQ9BXX2 1392 aa37.26■■■■□ 3.55
NKX2-1-205ENST00000546983 TBX22Q9Y458 520 aa37.25■■■■□ 3.55
NKX2-1-205ENST00000546983 DIP2AQ14689 1571 aa37.21■■■■□ 3.55
NKX2-1-205ENST00000546983 SPATA31E1Q6ZUB1 1445 aa37.19■■■■□ 3.54
NKX2-1-205ENST00000546983 PIK3R4Q99570 1358 aa37.19■■■■□ 3.54
NKX2-1-205ENST00000546983 SLC26A8Q96RN1 970 aa37.19■■■■□ 3.54
NKX2-1-205ENST00000546983 NEXMIFQ5QGS0 1516 aa37.19■■■■□ 3.54
NKX2-1-205ENST00000546983 KCNA6P17658 529 aa37.16■■■■□ 3.54
NKX2-1-205ENST00000546983 NUTM2DQ5VT03 806 aaPredicted RBP37.15■■■■□ 3.54
NKX2-1-205ENST00000546983 STAC3Q96MF2 364 aa37.15■■■■□ 3.54
NKX2-1-205ENST00000546983 SETBP1Q9Y6X0 1596 aa37.12■■■■□ 3.53
NKX2-1-205ENST00000546983 RGL3Q3MIN7 710 aa37.12■■■■□ 3.53
NKX2-1-205ENST00000546983 FBXO41Q8TF61 875 aa37.12■■■■□ 3.53
NKX2-1-205ENST00000546983 ADAMTS13Q76LX8 1427 aa37.1■■■■□ 3.53
NKX2-1-205ENST00000546983 NKTRP30414 1462 aaKnown RBP37.05■■■■□ 3.52
NKX2-1-205ENST00000546983 PPLO60437 1756 aa37.02■■■■□ 3.52
NKX2-1-205ENST00000546983 NWD1Q149M9 1564 aa37■■■■□ 3.51
NKX2-1-205ENST00000546983 LRRC7Q96NW7 1537 aa36.98■■■■□ 3.51
NKX2-1-205ENST00000546983 MYOM2P54296 1465 aa36.95■■■■□ 3.51
NKX2-1-205ENST00000546983 PROSER2Q86WR7 435 aaPredicted RBP36.95■■■■□ 3.51
NKX2-1-205ENST00000546983 NCOA3Q9Y6Q9 1424 aa36.94■■■■□ 3.5
NKX2-1-205ENST00000546983 SENP3Q9H4L4 574 aaPredicted RBP36.94■■■■□ 3.5
NKX2-1-205ENST00000546983 DHX57Q6P158 1386 aaKnown RBP36.93■■■■□ 3.5
NKX2-1-205ENST00000546983 NRXN3Q9Y4C0 1643 aa36.93■■■■□ 3.5
NKX2-1-205ENST00000546983 TOM1O60784 492 aa36.92■■■■□ 3.5
NKX2-1-205ENST00000546983 CHD2O14647 1828 aaKnown RBP36.92■■■■□ 3.5
NKX2-1-205ENST00000546983 AMOTL2Q9Y2J4 779 aa36.91■■■■□ 3.5
NKX2-1-205ENST00000546983 IFT172Q9UG01 1749 aa36.9■■■■□ 3.5
NKX2-1-205ENST00000546983 ADGRF5Q8IZF2 1346 aa36.9■■■■□ 3.5
NKX2-1-205ENST00000546983 STRCP1A6NGW2 1772 aa36.9■■■■□ 3.5
NKX2-1-205ENST00000546983 PIK3C2GO75747 1445 aa36.88■■■■□ 3.49
NKX2-1-205ENST00000546983 ALKQ9UM73 1620 aa36.87■■■■□ 3.49
NKX2-1-205ENST00000546983 TMEM94Q12767 1356 aa36.87■■■■□ 3.49
NKX2-1-205ENST00000546983 METP08581 1390 aa36.86■■■■□ 3.49
NKX2-1-205ENST00000546983 NRXN1Q9ULB1 1477 aa36.86■■■■□ 3.49
NKX2-1-205ENST00000546983 UBAP1LF5GYI3 381 aa36.85■■■■□ 3.49
NKX2-1-205ENST00000546983 DCAF11Q8TEB1 546 aa36.85■■■■□ 3.49
NKX2-1-205ENST00000546983 PCGF6Q9BYE7 350 aa36.85■■■■□ 3.49
NKX2-1-205ENST00000546983 ILDR1Q86SU0 546 aaPredicted RBP36.81■■■■□ 3.48
NKX2-1-205ENST00000546983 C14orf93Q9H972 538 aaKnown RBP36.8■■■■□ 3.48
NKX2-1-205ENST00000546983 PRAG1Q86YV5 1406 aa36.79■■■■□ 3.48
NKX2-1-205ENST00000546983 PTPRUQ92729 1446 aa36.79■■■■□ 3.48
NKX2-1-205ENST00000546983 MSH6P52701 1360 aa36.78■■■■□ 3.48
NKX2-1-205ENST00000546983 LAMC1P11047 1609 aa36.77■■■■□ 3.48
NKX2-1-205ENST00000546983 XRN1Q8IZH2 1706 aaKnown RBP36.76■■■■□ 3.47
NKX2-1-205ENST00000546983 PTCH1Q13635 1447 aa36.75■■■■□ 3.47
NKX2-1-205ENST00000546983 C14orf37Q86TY3 774 aa36.74■■■■□ 3.47
NKX2-1-205ENST00000546983 KDM2AQ9Y2K7 1162 aa36.74■■■■□ 3.47
NKX2-1-205ENST00000546983 SETD1AO15047 1707 aaKnown RBP36.72■■■■□ 3.47
NKX2-1-205ENST00000546983 C19orf44Q9H6X5 657 aa36.72■■■■□ 3.47
NKX2-1-205ENST00000546983 LRPPRCP42704 1394 aaKnown RBP36.69■■■■□ 3.46
NKX2-1-205ENST00000546983 ABCC11Q96J66 1382 aa36.68■■■■□ 3.46
NKX2-1-205ENST00000546983 CLSPNQ9HAW4 1339 aa36.68■■■■□ 3.46
NKX2-1-205ENST00000546983 NEUROD1Q13562 356 aa36.66■■■■□ 3.46
NKX2-1-205ENST00000546983 CADPS2Q86UW7 1296 aa36.66■■■■□ 3.46
NKX2-1-205ENST00000546983 SIRT1Q96EB6 747 aa36.66■■■■□ 3.46
NKX2-1-205ENST00000546983 TECPR2O15040 1411 aa36.66■■■■□ 3.46
NKX2-1-205ENST00000546983 DCCP43146 1447 aa36.66■■■■□ 3.46
NKX2-1-205ENST00000546983 CFAP70Q5T0N1 1121 aa36.65■■■■□ 3.46
NKX2-1-205ENST00000546983 SIN3AQ96ST3 1273 aa36.65■■■■□ 3.46
NKX2-1-205ENST00000546983 ATF3P18847 181 aa36.63■■■■□ 3.45
NKX2-1-205ENST00000546983 XIRP1Q702N8 1843 aaKnown RBP36.62■■■■□ 3.45
NKX2-1-205ENST00000546983 YTHDC2Q9H6S0 1430 aaKnown RBP36.61■■■■□ 3.45
NKX2-1-205ENST00000546983 L3MBTL2Q969R5 705 aa36.6■■■■□ 3.45
NKX2-1-205ENST00000546983 RBM33Q96EV2 1170 aaKnown RBP36.59■■■■□ 3.45
NKX2-1-205ENST00000546983 SCAF1Q9H7N4 1312 aaKnown RBP36.59■■■■□ 3.45
NKX2-1-205ENST00000546983 TMEM132EQ6IEE7 984 aa36.58■■■■□ 3.45
NKX2-1-205ENST00000546983 ROBO2Q9HCK4 1378 aa36.57■■■■□ 3.45
NKX2-1-205ENST00000546983 PIP4K2BP78356 416 aa36.57■■■■□ 3.44
NKX2-1-205ENST00000546983 FAM135BQ49AJ0 1406 aa36.57■■■■□ 3.44
NKX2-1-205ENST00000546983 ADGRL3Q9HAR2 1447 aa36.57■■■■□ 3.44
NKX2-1-205ENST00000546983 TONSLQ96HA7 1378 aa36.56■■■■□ 3.44
NKX2-1-205ENST00000546983 STK26Q9P289 416 aa36.56■■■■□ 3.44
NKX2-1-205ENST00000546983 SLAIN2Q9P270 581 aa36.54■■■■□ 3.44
NKX2-1-205ENST00000546983 ASXL1Q8IXJ9 1541 aa36.54■■■■□ 3.44
NKX2-1-205ENST00000546983 KNDC1Q76NI1 1749 aa36.52■■■■□ 3.44
NKX2-1-205ENST00000546983 KIAA1210Q9ULL0 1709 aa36.5■■■■□ 3.43
NKX2-1-205ENST00000546983 DLC1Q96QB1 1528 aa36.49■■■■□ 3.43
NKX2-1-205ENST00000546983 ADGRB1O14514 1584 aa36.49■■■■□ 3.43
NKX2-1-205ENST00000546983 TIMELESSQ9UNS1 1208 aa36.47■■■■□ 3.43
NKX2-1-205ENST00000546983 SIPA1L2Q9P2F8 1722 aaPredicted RBP36.46■■■■□ 3.43
NKX2-1-205ENST00000546983 POGKQ9P215 609 aa36.42■■■■□ 3.42
NKX2-1-205ENST00000546983 WAPLQ7Z5K2 1190 aa36.39■■■■□ 3.42
NKX2-1-205ENST00000546983 CCER1Q8TC90 406 aaPredicted RBP36.37■■■■□ 3.41
NKX2-1-205ENST00000546983 PRAM1Q96QH2 718 aa36.37■■■■□ 3.41
NKX2-1-205ENST00000546983 TRAK1Q9UPV9 953 aa36.37■■■■□ 3.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms