RNA–Protein interactions for RNA: ENST00000546842.5

NR4A1-207, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 2

Gene NR4A1, Length 1,258 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-207ENST00000546842 NWD1Q149M9 1564 aa44.39■■■■■ 4.7
NR4A1-207ENST00000546842 TMEM131LA2VDJ0 1609 aa44.37■■■■■ 4.69
NR4A1-207ENST00000546842 ROCK1Q13464 1354 aa44.37■■■■■ 4.69
NR4A1-207ENST00000546842 PROSER2Q86WR7 435 aaPredicted RBP44.37■■■■■ 4.69
NR4A1-207ENST00000546842 NKTRP30414 1462 aaKnown RBP44.36■■■■■ 4.69
NR4A1-207ENST00000546842 BCANQ96GW7 911 aa44.36■■■■■ 4.69
NR4A1-207ENST00000546842 FAM135BQ49AJ0 1406 aa44.34■■■■■ 4.69
NR4A1-207ENST00000546842 RBM33Q96EV2 1170 aaKnown RBP44.34■■■■■ 4.69
NR4A1-207ENST00000546842 RIMS2Q9UQ26 1411 aa44.33■■■■■ 4.69
NR4A1-207ENST00000546842 E9PCH4 1651 aa44.33■■■■■ 4.69
NR4A1-207ENST00000546842 PLEKHG1Q9ULL1 1385 aa44.32■■■■■ 4.69
NR4A1-207ENST00000546842 IQGAP3Q86VI3 1631 aa44.29■■■■■ 4.68
NR4A1-207ENST00000546842 PPP1R15AO75807 674 aaPredicted RBP44.27■■■■■ 4.68
NR4A1-207ENST00000546842 ROBO1Q9Y6N7 1651 aa44.24■■■■■ 4.67
NR4A1-207ENST00000546842 CHD2O14647 1828 aaKnown RBP44.24■■■■■ 4.67
NR4A1-207ENST00000546842 HDGFP51858 240 aaKnown RBP44.23■■■■■ 4.67
NR4A1-207ENST00000546842 CHGAP10645 457 aaKnown RBP44.22■■■■■ 4.67
NR4A1-207ENST00000546842 ITGAEP38570 1179 aa44.2■■■■■ 4.67
NR4A1-207ENST00000546842 NUP155O75694 1391 aa44.18■■■■■ 4.66
NR4A1-207ENST00000546842 MSH6P52701 1360 aa44.18■■■■■ 4.66
NR4A1-207ENST00000546842 PPARGC1BQ86YN6 1023 aaKnown RBP44.15■■■■■ 4.66
NR4A1-207ENST00000546842 ABCF1Q8NE71 845 aaKnown RBP eCLIP44.15■■■■■ 4.66
NR4A1-207ENST00000546842 NUTM2DQ5VT03 806 aaPredicted RBP44.13■■■■■ 4.66
NR4A1-207ENST00000546842 TBX22Q9Y458 520 aa44.13■■■■■ 4.66
NR4A1-207ENST00000546842 ADAMTS13Q76LX8 1427 aa44.1■■■■■ 4.65
NR4A1-207ENST00000546842 RGS17Q9UGC6 210 aaPredicted RBP44.08■■■■■ 4.65
NR4A1-207ENST00000546842 DIP2AQ14689 1571 aa44.06■■■■■ 4.64
NR4A1-207ENST00000546842 SLAIN2Q9P270 581 aa44.05■■■■■ 4.64
NR4A1-207ENST00000546842 NCOA3Q9Y6Q9 1424 aa43.99■■■■■ 4.63
NR4A1-207ENST00000546842 PHLPP1O60346 1717 aa43.98■■■■■ 4.63
NR4A1-207ENST00000546842 PIK3R4Q99570 1358 aa43.97■■■■■ 4.63
NR4A1-207ENST00000546842 SPHKAPQ2M3C7 1700 aa43.96■■■■■ 4.63
NR4A1-207ENST00000546842 TRPM2O94759 1503 aa43.93■■■■■ 4.62
NR4A1-207ENST00000546842 C14orf37Q86TY3 774 aa43.92■■■■■ 4.62
NR4A1-207ENST00000546842 SIPA1L2Q9P2F8 1722 aaPredicted RBP43.89■■■■■ 4.62
NR4A1-207ENST00000546842 PTPRUQ92729 1446 aa43.88■■■■■ 4.61
NR4A1-207ENST00000546842 NRXN3Q9Y4C0 1643 aa43.85■■■■■ 4.61
NR4A1-207ENST00000546842 COL16A1Q07092 1604 aaPredicted RBP43.84■■■■■ 4.61
NR4A1-207ENST00000546842 JCADQ9P266 1359 aa43.84■■■■■ 4.61
NR4A1-207ENST00000546842 AMOTL2Q9Y2J4 779 aa43.84■■■■■ 4.61
NR4A1-207ENST00000546842 RRBP1Q9P2E9 1410 aaKnown RBP43.83■■■■■ 4.61
NR4A1-207ENST00000546842 C19orf44Q9H6X5 657 aa43.83■■■■■ 4.61
NR4A1-207ENST00000546842 POTEAQ6S8J7 498 aa43.82■■■■■ 4.61
NR4A1-207ENST00000546842 SETBP1Q9Y6X0 1596 aa43.81■■■■■ 4.6
NR4A1-207ENST00000546842 CADPS2Q86UW7 1296 aa43.81■■■■■ 4.6
NR4A1-207ENST00000546842 ATF3P18847 181 aa43.78■■■■■ 4.6
NR4A1-207ENST00000546842 ZNF326Q5BKZ1 582 aaKnown RBP43.78■■■■■ 4.6
NR4A1-207ENST00000546842 XRN1Q8IZH2 1706 aaKnown RBP43.77■■■■■ 4.6
NR4A1-207ENST00000546842 CLTCL1P53675 1640 aa43.77■■■■■ 4.6
NR4A1-207ENST00000546842 NAIPQ13075 1403 aa43.74■■■■■ 4.59
NR4A1-207ENST00000546842 AHDC1Q5TGY3 1603 aaPredicted RBP43.73■■■■■ 4.59
NR4A1-207ENST00000546842 NEXMIFQ5QGS0 1516 aa43.68■■■■■ 4.58
NR4A1-207ENST00000546842 METP08581 1390 aa43.67■■■■■ 4.58
NR4A1-207ENST00000546842 DCCP43146 1447 aa43.66■■■■■ 4.58
NR4A1-207ENST00000546842 LRP6O75581 1613 aa43.63■■■■■ 4.58
NR4A1-207ENST00000546842 KIF1BO60333 1816 aa43.63■■■■■ 4.57
NR4A1-207ENST00000546842 BRINP3Q76B58 766 aa43.62■■■■■ 4.57
NR4A1-207ENST00000546842 SHPRHQ149N8 1683 aa43.6■■■■■ 4.57
NR4A1-207ENST00000546842 SPATA31A6Q5VVP1 1343 aa43.6■■■■■ 4.57
NR4A1-207ENST00000546842 HFM1A2PYH4 1435 aa43.56■■■■■ 4.56
NR4A1-207ENST00000546842 ASXL1Q8IXJ9 1541 aa43.55■■■■■ 4.56
NR4A1-207ENST00000546842 MST1RQ04912 1400 aa43.55■■■■■ 4.56
NR4A1-207ENST00000546842 TRIM52Q96A61 297 aa43.52■■■■■ 4.56
NR4A1-207ENST00000546842 ADGRL3Q9HAR2 1447 aa43.5■■■■■ 4.55
NR4A1-207ENST00000546842 MEX3CQ5U5Q3 659 aaKnown RBP43.5■■■■■ 4.55
NR4A1-207ENST00000546842 SETD1AO15047 1707 aaKnown RBP43.5■■■■■ 4.55
NR4A1-207ENST00000546842 NALCNQ8IZF0 1738 aa43.48■■■■■ 4.55
NR4A1-207ENST00000546842 NHSL1Q5SYE7 1610 aa43.45■■■■■ 4.55
NR4A1-207ENST00000546842 SLC4A1APQ9BWU0 796 aaKnown RBP43.42■■■■■ 4.54
NR4A1-207ENST00000546842 SETD5Q9C0A6 1442 aa43.4■■■■■ 4.54
NR4A1-207ENST00000546842 VGFO15240 615 aaPredicted RBP43.4■■■■■ 4.54
NR4A1-207ENST00000546842 ZNF772Q68DY9 489 aaPredicted RBP43.38■■■■■ 4.53
NR4A1-207ENST00000546842 PTCH1Q13635 1447 aa43.37■■■■■ 4.53
NR4A1-207ENST00000546842 NUTM2BA6NNL0 878 aaPredicted RBP43.36■■■■■ 4.53
NR4A1-207ENST00000546842 NUTM2EB1AL46 878 aaPredicted RBP43.36■■■■■ 4.53
NR4A1-207ENST00000546842 NUTM2AQ8IVF1 878 aaPredicted RBP43.36■■■■■ 4.53
NR4A1-207ENST00000546842 PPLO60437 1756 aa43.34■■■■■ 4.53
NR4A1-207ENST00000546842 RPGRIP1LQ68CZ1 1315 aa43.34■■■■■ 4.53
NR4A1-207ENST00000546842 ROBO2Q9HCK4 1378 aa43.33■■■■■ 4.53
NR4A1-207ENST00000546842 DDX17Q92841 729 aaKnown RBP43.32■■■■■ 4.53
NR4A1-207ENST00000546842 LRRC59Q96AG4 307 aaKnown RBP43.29■■■■■ 4.52
NR4A1-207ENST00000546842 C1orf167Q5SNV9 1468 aa43.28■■■■■ 4.52
NR4A1-207ENST00000546842 PRAG1Q86YV5 1406 aa43.28■■■■■ 4.52
NR4A1-207ENST00000546842 FOXD1Q16676 465 aa43.25■■■■■ 4.51
NR4A1-207ENST00000546842 PNPLA6Q8IY17 1366 aa43.23■■■■■ 4.51
NR4A1-207ENST00000546842 AFF2P51816 1311 aa43.2■■■■■ 4.51
NR4A1-207ENST00000546842 LAMC1P11047 1609 aa43.19■■■■■ 4.5
NR4A1-207ENST00000546842 RXRBP28702 533 aa43.16■■■■■ 4.5
NR4A1-207ENST00000546842 CCDC144AA2RUR9 1427 aa43.14■■■■■ 4.5
NR4A1-207ENST00000546842 ORAI2Q96SN7 254 aa43.14■■■■■ 4.5
NR4A1-207ENST00000546842 ADGRF5Q8IZF2 1346 aa43.11■■■■■ 4.49
NR4A1-207ENST00000546842 C8orf37Q96NL8 207 aa43.1■■■■■ 4.49
NR4A1-207ENST00000546842 SPATA31E1Q6ZUB1 1445 aa43.09■■■■■ 4.49
NR4A1-207ENST00000546842 CDK12Q9NYV4 1490 aaPredicted RBP43.08■■■■■ 4.49
NR4A1-207ENST00000546842 SOS2Q07890 1332 aaPredicted RBP43.08■■■■■ 4.49
NR4A1-207ENST00000546842 RGL3Q3MIN7 710 aa43.06■■■■■ 4.48
NR4A1-207ENST00000546842 MPHOSPH9Q99550 1183 aa43.06■■■■■ 4.48
NR4A1-207ENST00000546842 IFT172Q9UG01 1749 aa43.05■■■■■ 4.48
NR4A1-207ENST00000546842 UPF1Q92900 1129 aaKnown RBP eCLIP43.05■■■■■ 4.48
NR4A1-207ENST00000546842 CDC42BPGQ6DT37 1551 aa43.04■■■■■ 4.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms