RNA–Protein interactions for RNA: ENST00000546619.5

CALCOCO1-204, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 4

Gene CALCOCO1, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-204ENST00000546619 NKTRP30414 1462 aaKnown RBP23.49■■□□□ 1.35
CALCOCO1-204ENST00000546619 NWD1Q149M9 1564 aa23.47■■□□□ 1.35
CALCOCO1-204ENST00000546619 PPP1R15AO75807 674 aaPredicted RBP23.46■■□□□ 1.35
CALCOCO1-204ENST00000546619 ZFYVE9O95405 1425 aa23.46■■□□□ 1.35
CALCOCO1-204ENST00000546619 RIMS2Q9UQ26 1411 aa23.45■■□□□ 1.34
CALCOCO1-204ENST00000546619 PLEKHG1Q9ULL1 1385 aa23.45■■□□□ 1.34
CALCOCO1-204ENST00000546619 UNC13BO14795 1591 aa23.44■■□□□ 1.34
CALCOCO1-204ENST00000546619 GCC2Q8IWJ2 1684 aa23.44■■□□□ 1.34
CALCOCO1-204ENST00000546619 HDGFP51858 240 aaKnown RBP23.43■■□□□ 1.34
CALCOCO1-204ENST00000546619 MSH6P52701 1360 aa23.42■■□□□ 1.34
CALCOCO1-204ENST00000546619 ROBO1Q9Y6N7 1651 aa23.42■■□□□ 1.34
CALCOCO1-204ENST00000546619 TMEM131LA2VDJ0 1609 aa23.42■■□□□ 1.34
CALCOCO1-204ENST00000546619 MYO5BQ9ULV0 1848 aa23.41■■□□□ 1.34
CALCOCO1-204ENST00000546619 CHGAP10645 457 aaKnown RBP23.41■■□□□ 1.34
CALCOCO1-204ENST00000546619 ROCK1Q13464 1354 aa23.4■■□□□ 1.34
CALCOCO1-204ENST00000546619 RGS17Q9UGC6 210 aaPredicted RBP23.39■■□□□ 1.33
CALCOCO1-204ENST00000546619 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.38■■□□□ 1.33
CALCOCO1-204ENST00000546619 E9PCH4 1651 aa23.37■■□□□ 1.33
CALCOCO1-204ENST00000546619 SLAIN2Q9P270 581 aa23.36■■□□□ 1.33
CALCOCO1-204ENST00000546619 IQGAP3Q86VI3 1631 aa23.35■■□□□ 1.33
CALCOCO1-204ENST00000546619 TBX22Q9Y458 520 aa23.35■■□□□ 1.33
CALCOCO1-204ENST00000546619 CHD2O14647 1828 aaKnown RBP23.34■■□□□ 1.33
CALCOCO1-204ENST00000546619 ITGAEP38570 1179 aa23.34■■□□□ 1.33
CALCOCO1-204ENST00000546619 NUTM2DQ5VT03 806 aaPredicted RBP23.34■■□□□ 1.33
CALCOCO1-204ENST00000546619 NUP155O75694 1391 aa23.33■■□□□ 1.33
CALCOCO1-204ENST00000546619 C14orf37Q86TY3 774 aa23.31■■□□□ 1.32
CALCOCO1-204ENST00000546619 ADAMTS13Q76LX8 1427 aa23.31■■□□□ 1.32
CALCOCO1-204ENST00000546619 DIP2AQ14689 1571 aa23.29■■□□□ 1.32
CALCOCO1-204ENST00000546619 NCOA3Q9Y6Q9 1424 aa23.29■■□□□ 1.32
CALCOCO1-204ENST00000546619 PHLPP1O60346 1717 aa23.28■■□□□ 1.32
CALCOCO1-204ENST00000546619 POTEAQ6S8J7 498 aa23.27■■□□□ 1.32
CALCOCO1-204ENST00000546619 PIK3R4Q99570 1358 aa23.27■■□□□ 1.31
CALCOCO1-204ENST00000546619 PPARGC1BQ86YN6 1023 aaKnown RBP23.26■■□□□ 1.31
CALCOCO1-204ENST00000546619 JCADQ9P266 1359 aa23.26■■□□□ 1.31
CALCOCO1-204ENST00000546619 TRPM2O94759 1503 aa23.23■■□□□ 1.31
CALCOCO1-204ENST00000546619 CADPS2Q86UW7 1296 aa23.23■■□□□ 1.31
CALCOCO1-204ENST00000546619 ATF3P18847 181 aa23.22■■□□□ 1.31
CALCOCO1-204ENST00000546619 C19orf44Q9H6X5 657 aa23.22■■□□□ 1.31
CALCOCO1-204ENST00000546619 AMOTL2Q9Y2J4 779 aa23.21■■□□□ 1.31
CALCOCO1-204ENST00000546619 COL16A1Q07092 1604 aaPredicted RBP23.21■■□□□ 1.31
CALCOCO1-204ENST00000546619 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.19■■□□□ 1.3
CALCOCO1-204ENST00000546619 PTPRUQ92729 1446 aa23.18■■□□□ 1.3
CALCOCO1-204ENST00000546619 ZNF326Q5BKZ1 582 aaKnown RBP23.17■■□□□ 1.3
CALCOCO1-204ENST00000546619 SPHKAPQ2M3C7 1700 aa23.16■■□□□ 1.3
CALCOCO1-204ENST00000546619 AHDC1Q5TGY3 1603 aaPredicted RBP23.15■■□□□ 1.3
CALCOCO1-204ENST00000546619 SPATA31A6Q5VVP1 1343 aa23.14■■□□□ 1.3
CALCOCO1-204ENST00000546619 NRXN3Q9Y4C0 1643 aa23.14■■□□□ 1.29
CALCOCO1-204ENST00000546619 SETBP1Q9Y6X0 1596 aa23.14■■□□□ 1.29
CALCOCO1-204ENST00000546619 LRP6O75581 1613 aa23.12■■□□□ 1.29
CALCOCO1-204ENST00000546619 MEX3CQ5U5Q3 659 aaKnown RBP23.12■■□□□ 1.29
CALCOCO1-204ENST00000546619 XRN1Q8IZH2 1706 aaKnown RBP23.11■■□□□ 1.29
CALCOCO1-204ENST00000546619 DCCP43146 1447 aa23.11■■□□□ 1.29
CALCOCO1-204ENST00000546619 BRINP3Q76B58 766 aa23.11■■□□□ 1.29
CALCOCO1-204ENST00000546619 METP08581 1390 aa23.09■■□□□ 1.29
CALCOCO1-204ENST00000546619 CLTCL1P53675 1640 aa23.08■■□□□ 1.28
CALCOCO1-204ENST00000546619 SHPRHQ149N8 1683 aa23.07■■□□□ 1.28
CALCOCO1-204ENST00000546619 NEXMIFQ5QGS0 1516 aa23.06■■□□□ 1.28
CALCOCO1-204ENST00000546619 ASXL1Q8IXJ9 1541 aa23.06■■□□□ 1.28
CALCOCO1-204ENST00000546619 RRBP1Q9P2E9 1410 aaKnown RBP23.06■■□□□ 1.28
CALCOCO1-204ENST00000546619 SETD1AO15047 1707 aaKnown RBP23.05■■□□□ 1.28
CALCOCO1-204ENST00000546619 MST1RQ04912 1400 aa23.05■■□□□ 1.28
CALCOCO1-204ENST00000546619 NAIPQ13075 1403 aa23.05■■□□□ 1.28
CALCOCO1-204ENST00000546619 ZNF772Q68DY9 489 aaPredicted RBP23.04■■□□□ 1.28
CALCOCO1-204ENST00000546619 ADGRL3Q9HAR2 1447 aa23.02■■□□□ 1.28
CALCOCO1-204ENST00000546619 NUTM2BA6NNL0 878 aaPredicted RBP23.02■■□□□ 1.28
CALCOCO1-204ENST00000546619 NUTM2EB1AL46 878 aaPredicted RBP23.02■■□□□ 1.28
CALCOCO1-204ENST00000546619 NUTM2AQ8IVF1 878 aaPredicted RBP23.02■■□□□ 1.28
CALCOCO1-204ENST00000546619 TRIM52Q96A61 297 aa22.99■■□□□ 1.27
CALCOCO1-204ENST00000546619 SETD5Q9C0A6 1442 aa22.99■■□□□ 1.27
CALCOCO1-204ENST00000546619 KIF1BO60333 1816 aa22.98■■□□□ 1.27
CALCOCO1-204ENST00000546619 NHSL1Q5SYE7 1610 aa22.97■■□□□ 1.27
CALCOCO1-204ENST00000546619 NALCNQ8IZF0 1738 aa22.96■■□□□ 1.27
CALCOCO1-204ENST00000546619 LRRC59Q96AG4 307 aaKnown RBP22.96■■□□□ 1.27
CALCOCO1-204ENST00000546619 HFM1A2PYH4 1435 aa22.95■■□□□ 1.26
CALCOCO1-204ENST00000546619 VGFO15240 615 aaPredicted RBP22.95■■□□□ 1.26
CALCOCO1-204ENST00000546619 DDX17Q92841 729 aaKnown RBP22.95■■□□□ 1.26
CALCOCO1-204ENST00000546619 PTCH1Q13635 1447 aa22.93■■□□□ 1.26
CALCOCO1-204ENST00000546619 RXRBP28702 533 aa22.93■■□□□ 1.26
CALCOCO1-204ENST00000546619 AFF2P51816 1311 aa22.92■■□□□ 1.26
CALCOCO1-204ENST00000546619 SLC4A1APQ9BWU0 796 aaKnown RBP22.92■■□□□ 1.26
CALCOCO1-204ENST00000546619 C1orf167Q5SNV9 1468 aa22.91■■□□□ 1.26
CALCOCO1-204ENST00000546619 PNPLA6Q8IY17 1366 aa22.9■■□□□ 1.26
CALCOCO1-204ENST00000546619 ROBO2Q9HCK4 1378 aa22.9■■□□□ 1.26
CALCOCO1-204ENST00000546619 RPGRIP1LQ68CZ1 1315 aa22.9■■□□□ 1.26
CALCOCO1-204ENST00000546619 UPF1Q92900 1129 aaKnown RBP eCLIP22.87■■□□□ 1.25
CALCOCO1-204ENST00000546619 C8orf37Q96NL8 207 aa22.87■■□□□ 1.25
CALCOCO1-204ENST00000546619 CDK12Q9NYV4 1490 aaPredicted RBP22.85■■□□□ 1.25
CALCOCO1-204ENST00000546619 PRAG1Q86YV5 1406 aa22.85■■□□□ 1.25
CALCOCO1-204ENST00000546619 ORAI2Q96SN7 254 aa22.84■■□□□ 1.25
CALCOCO1-204ENST00000546619 PPLO60437 1756 aa22.83■■□□□ 1.24
CALCOCO1-204ENST00000546619 FOXD1Q16676 465 aa22.82■■□□□ 1.24
CALCOCO1-204ENST00000546619 ADAMTS2O95450 1211 aa22.81■■□□□ 1.24
CALCOCO1-204ENST00000546619 QTRT2Q9H974 415 aaKnown RBP22.81■■□□□ 1.24
CALCOCO1-204ENST00000546619 LAMC1P11047 1609 aa22.81■■□□□ 1.24
CALCOCO1-204ENST00000546619 SOS2Q07890 1332 aaPredicted RBP22.8■■□□□ 1.24
CALCOCO1-204ENST00000546619 NGLY1Q96IV0 654 aa22.79■■□□□ 1.24
CALCOCO1-204ENST00000546619 CCDC144AA2RUR9 1427 aa22.78■■□□□ 1.24
CALCOCO1-204ENST00000546619 RBM6P78332 1123 aaKnown RBP22.78■■□□□ 1.24
CALCOCO1-204ENST00000546619 RGS12O14924 1447 aa22.77■■□□□ 1.24
CALCOCO1-204ENST00000546619 ADGRF5Q8IZF2 1346 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 146.9 ms