RNA–Protein interactions for RNA: ENST00000546490.1

CHPT1-202, Transcript of choline phosphotransferase 1, humanhuman

TSL 2

Gene CHPT1, Length 476 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-202ENST00000546490 NKTRP30414 1462 aaKnown RBP28.66■■■□□ 2.18
CHPT1-202ENST00000546490 PPARGC1BQ86YN6 1023 aaKnown RBP28.66■■■□□ 2.18
CHPT1-202ENST00000546490 SPHKAPQ2M3C7 1700 aa28.64■■■□□ 2.18
CHPT1-202ENST00000546490 RIMS2Q9UQ26 1411 aa28.64■■■□□ 2.18
CHPT1-202ENST00000546490 CHD2O14647 1828 aaKnown RBP28.63■■■□□ 2.17
CHPT1-202ENST00000546490 NUP155O75694 1391 aa28.62■■■□□ 2.17
CHPT1-202ENST00000546490 SLC26A8Q96RN1 970 aa28.62■■■□□ 2.17
CHPT1-202ENST00000546490 PLEKHG1Q9ULL1 1385 aa28.62■■■□□ 2.17
CHPT1-202ENST00000546490 KCNA6P17658 529 aa28.6■■■□□ 2.17
CHPT1-202ENST00000546490 BCANQ96GW7 911 aa28.59■■■□□ 2.17
CHPT1-202ENST00000546490 TMEM94Q12767 1356 aa28.59■■■□□ 2.17
CHPT1-202ENST00000546490 RRBP1Q9P2E9 1410 aaKnown RBP28.59■■■□□ 2.17
CHPT1-202ENST00000546490 PPP1R15AO75807 674 aaPredicted RBP28.58■■■□□ 2.17
CHPT1-202ENST00000546490 HDGFP51858 240 aaKnown RBP28.58■■■□□ 2.17
CHPT1-202ENST00000546490 DIP2AQ14689 1571 aa28.58■■■□□ 2.17
CHPT1-202ENST00000546490 SOCS7O14512 581 aa28.56■■■□□ 2.16
CHPT1-202ENST00000546490 CHGAP10645 457 aaKnown RBP28.55■■■□□ 2.16
CHPT1-202ENST00000546490 ROBO1Q9Y6N7 1651 aa28.52■■■□□ 2.16
CHPT1-202ENST00000546490 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.52■■■□□ 2.16
CHPT1-202ENST00000546490 PROSER2Q86WR7 435 aaPredicted RBP28.51■■■□□ 2.15
CHPT1-202ENST00000546490 SENP3Q9H4L4 574 aaPredicted RBP28.51■■■□□ 2.15
CHPT1-202ENST00000546490 FAM135BQ49AJ0 1406 aa28.48■■■□□ 2.15
CHPT1-202ENST00000546490 MSH6P52701 1360 aa28.47■■■□□ 2.15
CHPT1-202ENST00000546490 TRPM2O94759 1503 aa28.46■■■□□ 2.15
CHPT1-202ENST00000546490 ADAMTS13Q76LX8 1427 aa28.45■■■□□ 2.15
CHPT1-202ENST00000546490 NAIPQ13075 1403 aa28.44■■■□□ 2.14
CHPT1-202ENST00000546490 KIF1BO60333 1816 aa28.44■■■□□ 2.14
CHPT1-202ENST00000546490 CLTCL1P53675 1640 aa28.43■■■□□ 2.14
CHPT1-202ENST00000546490 RBM33Q96EV2 1170 aaKnown RBP28.43■■■□□ 2.14
CHPT1-202ENST00000546490 TBX22Q9Y458 520 aa28.43■■■□□ 2.14
CHPT1-202ENST00000546490 PIK3R4Q99570 1358 aa28.41■■■□□ 2.14
CHPT1-202ENST00000546490 NRXN3Q9Y4C0 1643 aa28.41■■■□□ 2.14
CHPT1-202ENST00000546490 PHF23Q9BUL5 403 aaPredicted RBP28.41■■■□□ 2.14
CHPT1-202ENST00000546490 NUTM2DQ5VT03 806 aaPredicted RBP28.4■■■□□ 2.14
CHPT1-202ENST00000546490 SETBP1Q9Y6X0 1596 aa28.39■■■□□ 2.14
CHPT1-202ENST00000546490 NCOA3Q9Y6Q9 1424 aa28.38■■■□□ 2.13
CHPT1-202ENST00000546490 PHLPP1O60346 1717 aa28.38■■■□□ 2.13
CHPT1-202ENST00000546490 HFM1A2PYH4 1435 aa28.37■■■□□ 2.13
CHPT1-202ENST00000546490 XRN1Q8IZH2 1706 aaKnown RBP28.36■■■□□ 2.13
CHPT1-202ENST00000546490 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.36■■■□□ 2.13
CHPT1-202ENST00000546490 NEXMIFQ5QGS0 1516 aa28.33■■■□□ 2.13
CHPT1-202ENST00000546490 ZNF326Q5BKZ1 582 aaKnown RBP28.3■■■□□ 2.12
CHPT1-202ENST00000546490 C14orf37Q86TY3 774 aa28.29■■■□□ 2.12
CHPT1-202ENST00000546490 SLAIN2Q9P270 581 aa28.28■■■□□ 2.12
CHPT1-202ENST00000546490 PTPRUQ92729 1446 aa28.27■■■□□ 2.12
CHPT1-202ENST00000546490 COL16A1Q07092 1604 aaPredicted RBP28.26■■■□□ 2.11
CHPT1-202ENST00000546490 TRIM52Q96A61 297 aa28.24■■■□□ 2.11
CHPT1-202ENST00000546490 AMOTL2Q9Y2J4 779 aa28.23■■■□□ 2.11
CHPT1-202ENST00000546490 DCCP43146 1447 aa28.21■■■□□ 2.11
CHPT1-202ENST00000546490 CADPS2Q86UW7 1296 aa28.21■■■□□ 2.11
CHPT1-202ENST00000546490 PPLO60437 1756 aa28.21■■■□□ 2.11
CHPT1-202ENST00000546490 AHDC1Q5TGY3 1603 aaPredicted RBP28.21■■■□□ 2.11
CHPT1-202ENST00000546490 SETD1AO15047 1707 aaKnown RBP28.21■■■□□ 2.11
CHPT1-202ENST00000546490 C19orf44Q9H6X5 657 aa28.2■■■□□ 2.1
CHPT1-202ENST00000546490 ATF3P18847 181 aa28.19■■■□□ 2.1
CHPT1-202ENST00000546490 NALCNQ8IZF0 1738 aa28.18■■■□□ 2.1
CHPT1-202ENST00000546490 SLC4A1APQ9BWU0 796 aaKnown RBP28.17■■■□□ 2.1
CHPT1-202ENST00000546490 METP08581 1390 aa28.16■■■□□ 2.1
CHPT1-202ENST00000546490 JCADQ9P266 1359 aa28.16■■■□□ 2.1
CHPT1-202ENST00000546490 SHPRHQ149N8 1683 aa28.16■■■□□ 2.1
CHPT1-202ENST00000546490 NHSL1Q5SYE7 1610 aa28.1■■■□□ 2.09
CHPT1-202ENST00000546490 ADGRL3Q9HAR2 1447 aa28.1■■■□□ 2.09
CHPT1-202ENST00000546490 ASXL1Q8IXJ9 1541 aa28.1■■■□□ 2.09
CHPT1-202ENST00000546490 RGS17Q9UGC6 210 aaPredicted RBP28.1■■■□□ 2.09
CHPT1-202ENST00000546490 IFT172Q9UG01 1749 aa28.08■■■□□ 2.09
CHPT1-202ENST00000546490 PTCH1Q13635 1447 aa28.08■■■□□ 2.09
CHPT1-202ENST00000546490 VGFO15240 615 aaPredicted RBP28.07■■■□□ 2.08
CHPT1-202ENST00000546490 RPGRIP1LQ68CZ1 1315 aa28.07■■■□□ 2.08
CHPT1-202ENST00000546490 MST1RQ04912 1400 aa28.07■■■□□ 2.08
CHPT1-202ENST00000546490 CCDC144AA2RUR9 1427 aa28.04■■■□□ 2.08
CHPT1-202ENST00000546490 PRAG1Q86YV5 1406 aa28.03■■■□□ 2.08
CHPT1-202ENST00000546490 BRINP3Q76B58 766 aa28.03■■■□□ 2.08
CHPT1-202ENST00000546490 SPATA31A6Q5VVP1 1343 aa28.02■■■□□ 2.08
CHPT1-202ENST00000546490 LRP6O75581 1613 aa28.01■■■□□ 2.07
CHPT1-202ENST00000546490 FOXD1Q16676 465 aa27.99■■■□□ 2.07
CHPT1-202ENST00000546490 POTEAQ6S8J7 498 aa27.96■■■□□ 2.07
CHPT1-202ENST00000546490 ROBO2Q9HCK4 1378 aa27.95■■■□□ 2.06
CHPT1-202ENST00000546490 SPATA31E1Q6ZUB1 1445 aa27.94■■■□□ 2.06
CHPT1-202ENST00000546490 SETD5Q9C0A6 1442 aa27.94■■■□□ 2.06
CHPT1-202ENST00000546490 MPHOSPH9Q99550 1183 aa27.94■■■□□ 2.06
CHPT1-202ENST00000546490 ACIN1Q9UKV3 1341 aaKnown RBP27.93■■■□□ 2.06
CHPT1-202ENST00000546490 LAMC1P11047 1609 aa27.93■■■□□ 2.06
CHPT1-202ENST00000546490 KNDC1Q76NI1 1749 aa27.93■■■□□ 2.06
CHPT1-202ENST00000546490 MEX3CQ5U5Q3 659 aaKnown RBP27.92■■■□□ 2.06
CHPT1-202ENST00000546490 CDC42BPGQ6DT37 1551 aa27.9■■■□□ 2.06
CHPT1-202ENST00000546490 C1orf167Q5SNV9 1468 aa27.9■■■□□ 2.06
CHPT1-202ENST00000546490 ANKRD30BQ9BXX2 1392 aa27.9■■■□□ 2.06
CHPT1-202ENST00000546490 RGL3Q3MIN7 710 aa27.85■■■□□ 2.05
CHPT1-202ENST00000546490 ADGRF5Q8IZF2 1346 aa27.85■■■□□ 2.05
CHPT1-202ENST00000546490 PIK3C2GO75747 1445 aa27.84■■■□□ 2.05
CHPT1-202ENST00000546490 TECPR2O15040 1411 aa27.84■■■□□ 2.05
CHPT1-202ENST00000546490 LRRC59Q96AG4 307 aaKnown RBP27.83■■■□□ 2.05
CHPT1-202ENST00000546490 ZNF772Q68DY9 489 aaPredicted RBP27.82■■■□□ 2.04
CHPT1-202ENST00000546490 PNPLA6Q8IY17 1366 aa27.81■■■□□ 2.04
CHPT1-202ENST00000546490 NUTM2BA6NNL0 878 aaPredicted RBP27.8■■■□□ 2.04
CHPT1-202ENST00000546490 NUTM2EB1AL46 878 aaPredicted RBP27.8■■■□□ 2.04
CHPT1-202ENST00000546490 NUTM2AQ8IVF1 878 aaPredicted RBP27.8■■■□□ 2.04
CHPT1-202ENST00000546490 RAB3GAP2Q9H2M9 1393 aa27.79■■■□□ 2.04
CHPT1-202ENST00000546490 DDX17Q92841 729 aaKnown RBP27.79■■■□□ 2.04
CHPT1-202ENST00000546490 LRPPRCP42704 1394 aaKnown RBP27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms