RNA–Protein interactions for RNA: ENST00000546433.5

SSH1-203, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 5,621 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-203ENST00000546433 CEP170Q5SW79 1584 aa13.09□□□□□ -0.31
SSH1-203ENST00000546433 ZNF518AQ6AHZ1 1483 aa13.08□□□□□ -0.31
SSH1-203ENST00000546433 ANKRD50Q9ULJ7 1429 aa13.08□□□□□ -0.32
SSH1-203ENST00000546433 LMTK3Q96Q04 1460 aa13.08□□□□□ -0.32
SSH1-203ENST00000546433 RBM19Q9Y4C8 960 aaKnown RBP13.08□□□□□ -0.32
SSH1-203ENST00000546433 RPGRIP1LQ68CZ1 1315 aa13.08□□□□□ -0.32
SSH1-203ENST00000546433 CFAP74Q9C0B2 1584 aa13.08□□□□□ -0.32
SSH1-203ENST00000546433 MSNP26038 577 aaKnown RBP13.07□□□□□ -0.32
SSH1-203ENST00000546433 NLRP13Q86W25 1043 aa13.07□□□□□ -0.32
SSH1-203ENST00000546433 COG3Q96JB2 828 aa13.07□□□□□ -0.32
SSH1-203ENST00000546433 TRAK1Q9UPV9 953 aa13.07□□□□□ -0.32
SSH1-203ENST00000546433 LMOD3Q0VAK6 560 aa13.06□□□□□ -0.32
SSH1-203ENST00000546433 ITPRIPQ8IWB1 547 aa13.06□□□□□ -0.32
SSH1-203ENST00000546433 HTATSF1O43719 755 aaKnown RBP13.06□□□□□ -0.32
SSH1-203ENST00000546433 C1orf141Q5JVX7 400 aa13.05□□□□□ -0.32
SSH1-203ENST00000546433 RAPGEF6Q8TEU7 1601 aa13.05□□□□□ -0.32
SSH1-203ENST00000546433 FGD6Q6ZV73 1430 aa13.05□□□□□ -0.32
SSH1-203ENST00000546433 L3MBTL2Q969R5 705 aa13.04□□□□□ -0.32
SSH1-203ENST00000546433 SUPT6HQ7KZ85 1726 aaKnown RBP13.04□□□□□ -0.32
SSH1-203ENST00000546433 STK31Q9BXU1 1019 aa13.04□□□□□ -0.32
SSH1-203ENST00000546433 HMMRO75330 724 aa13.04□□□□□ -0.32
SSH1-203ENST00000546433 MINK1Q8N4C8 1332 aaPredicted RBP13.03□□□□□ -0.32
SSH1-203ENST00000546433 PLCH2O75038 1416 aa13.03□□□□□ -0.32
SSH1-203ENST00000546433 SYAP1Q96A49 352 aaPredicted RBP13.02□□□□□ -0.32
SSH1-203ENST00000546433 GPATCH3Q96I76 525 aa13.02□□□□□ -0.32
SSH1-203ENST00000546433 UGGT2Q9NYU1 1516 aa13.02□□□□□ -0.32
SSH1-203ENST00000546433 CADPS2Q86UW7 1296 aa13.02□□□□□ -0.32
SSH1-203ENST00000546433 PPP1R1BQ9UD71 204 aaPredicted RBP13.02□□□□□ -0.32
SSH1-203ENST00000546433 GTF2E1P29083 439 aaPredicted RBP13.02□□□□□ -0.33
SSH1-203ENST00000546433 CEBPAP49715 358 aaPredicted RBP13.02□□□□□ -0.33
SSH1-203ENST00000546433 LRRC9Q6ZRR7 1453 aa13.02□□□□□ -0.33
SSH1-203ENST00000546433 ZNF330Q9Y3S2 320 aaPredicted RBP13.01□□□□□ -0.33
SSH1-203ENST00000546433 CDK13Q14004 1512 aaKnown RBP13.01□□□□□ -0.33
SSH1-203ENST00000546433 GNL2Q13823 731 aaKnown RBP13.01□□□□□ -0.33
SSH1-203ENST00000546433 KIAA0556O60303 1618 aa13.01□□□□□ -0.33
SSH1-203ENST00000546433 SMC4Q9NTJ3 1288 aa13.01□□□□□ -0.33
SSH1-203ENST00000546433 MYBBP1AQ9BQG0 1328 aaKnown RBP13.01□□□□□ -0.33
SSH1-203ENST00000546433 ZNF644Q9H582 1327 aaPredicted RBP13.01□□□□□ -0.33
SSH1-203ENST00000546433 NGLY1Q96IV0 654 aa13□□□□□ -0.33
SSH1-203ENST00000546433 CENPJQ9HC77 1338 aaPredicted RBP13□□□□□ -0.33
SSH1-203ENST00000546433 LTV1Q96GA3 475 aaPredicted RBP13□□□□□ -0.33
SSH1-203ENST00000546433 DEKP35659 375 aaKnown RBP13□□□□□ -0.33
SSH1-203ENST00000546433 DRC7Q8IY82 874 aa13□□□□□ -0.33
SSH1-203ENST00000546433 ABCC10Q5T3U5 1492 aa13□□□□□ -0.33
SSH1-203ENST00000546433 TAOK2Q9UL54 1235 aa12.99□□□□□ -0.33
SSH1-203ENST00000546433 NEO1Q92859 1461 aa12.99□□□□□ -0.33
SSH1-203ENST00000546433 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.99□□□□□ -0.33
SSH1-203ENST00000546433 SYTL4Q96C24 671 aaPredicted RBP12.99□□□□□ -0.33
SSH1-203ENST00000546433 SMG6Q86US8 1419 aaKnown RBP12.99□□□□□ -0.33
SSH1-203ENST00000546433 RAPGEF4Q8WZA2 1011 aa12.98□□□□□ -0.33
SSH1-203ENST00000546433 ATP10AO60312 1499 aa12.98□□□□□ -0.33
SSH1-203ENST00000546433 CSPP1Q1MSJ5 1256 aa12.97□□□□□ -0.33
SSH1-203ENST00000546433 SPRYD3Q8NCJ5 442 aa12.97□□□□□ -0.33
SSH1-203ENST00000546433 TULP1O00294 542 aaPredicted RBP12.97□□□□□ -0.33
SSH1-203ENST00000546433 SLC26A8Q96RN1 970 aa12.97□□□□□ -0.33
SSH1-203ENST00000546433 APBB1O00213 710 aa12.96□□□□□ -0.33
SSH1-203ENST00000546433 CHD1O14646 1710 aa12.96□□□□□ -0.33
SSH1-203ENST00000546433 KIAA2012Q0VF49 1180 aa12.96□□□□□ -0.33
SSH1-203ENST00000546433 TTC5Q8N0Z6 440 aa12.96□□□□□ -0.33
SSH1-203ENST00000546433 KDM6BO15054 1643 aa12.95□□□□□ -0.34
SSH1-203ENST00000546433 DHX29Q7Z478 1369 aaKnown RBP12.95□□□□□ -0.34
SSH1-203ENST00000546433 HFM1A2PYH4 1435 aa12.95□□□□□ -0.34
SSH1-203ENST00000546433 CCDC34Q96HJ3 373 aa12.95□□□□□ -0.34
SSH1-203ENST00000546433 IPO9Q96P70 1041 aaKnown RBP12.95□□□□□ -0.34
SSH1-203ENST00000546433 RTN4Q9NQC3 1192 aaKnown RBP12.95□□□□□ -0.34
SSH1-203ENST00000546433 STRN4Q9NRL3 753 aa12.95□□□□□ -0.34
SSH1-203ENST00000546433 TPM4P67936 248 aa12.94□□□□□ -0.34
SSH1-203ENST00000546433 ZFYVE16Q7Z3T8 1539 aa12.94□□□□□ -0.34
SSH1-203ENST00000546433 ROCK1Q13464 1354 aa12.94□□□□□ -0.34
SSH1-203ENST00000546433 HSPA2P54652 639 aa12.94□□□□□ -0.34
SSH1-203ENST00000546433 CTTNBP2Q8WZ74 1663 aa12.94□□□□□ -0.34
SSH1-203ENST00000546433 ABCA5Q8WWZ7 1642 aa12.93□□□□□ -0.34
SSH1-203ENST00000546433 NLRP2Q9NX02 1062 aa12.93□□□□□ -0.34
SSH1-203ENST00000546433 PRDM11Q9NQV5 511 aa12.93□□□□□ -0.34
SSH1-203ENST00000546433 UHRF1BP1LA0JNW5 1464 aa12.93□□□□□ -0.34
SSH1-203ENST00000546433 ATP10BO94823 1461 aa12.93□□□□□ -0.34
SSH1-203ENST00000546433 NGEFQ8N5V2 710 aa12.93□□□□□ -0.34
SSH1-203ENST00000546433 ABTB2Q8N961 1025 aa12.93□□□□□ -0.34
SSH1-203ENST00000546433 MFAP1P55081 439 aaKnown RBP12.92□□□□□ -0.34
SSH1-203ENST00000546433 A2MP01023 1474 aa12.92□□□□□ -0.34
SSH1-203ENST00000546433 CAMSAP2Q08AD1 1489 aa12.92□□□□□ -0.34
SSH1-203ENST00000546433 GORABQ5T7V8 394 aa12.92□□□□□ -0.34
SSH1-203ENST00000546433 CENPQQ7L2Z9 268 aaPredicted RBP12.91□□□□□ -0.34
SSH1-203ENST00000546433 CGNL1Q0VF96 1302 aa12.91□□□□□ -0.34
SSH1-203ENST00000546433 ANKRD30BQ9BXX2 1392 aa12.91□□□□□ -0.34
SSH1-203ENST00000546433 CCDC146Q8IYE0 955 aa12.9□□□□□ -0.34
SSH1-203ENST00000546433 SLKQ9H2G2 1235 aaPredicted RBP12.9□□□□□ -0.34
SSH1-203ENST00000546433 GOLGA6L3A6NEY3 463 aa12.9□□□□□ -0.34
SSH1-203ENST00000546433 E9PSI1 815 aa12.9□□□□□ -0.34
SSH1-203ENST00000546433 TARBP1Q13395 1621 aaKnown RBP12.9□□□□□ -0.34
SSH1-203ENST00000546433 TRIM6-TRIM34B2RNG4 842 aa12.9□□□□□ -0.34
SSH1-203ENST00000546433 ST18O60284 1047 aa12.9□□□□□ -0.34
SSH1-203ENST00000546433 TOM1L2Q6ZVM7 507 aa12.9□□□□□ -0.34
SSH1-203ENST00000546433 KIF3AQ9Y496 699 aa12.9□□□□□ -0.34
SSH1-203ENST00000546433 NCKAP5LQ9HCH0 1330 aa12.9□□□□□ -0.34
SSH1-203ENST00000546433 NLRP6P59044 892 aa12.9□□□□□ -0.35
SSH1-203ENST00000546433 ERBINQ96RT1 1412 aa12.89□□□□□ -0.35
SSH1-203ENST00000546433 CHMP4CQ96CF2 233 aa12.89□□□□□ -0.35
SSH1-203ENST00000546433 ZBED9Q6R2W3 1325 aa12.89□□□□□ -0.35
SSH1-203ENST00000546433 TAF7LQ5H9L4 462 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms