RNA–Protein interactions for RNA: ENST00000546260.5

SOD2-216, Transcript of superoxide dismutase 2, humanhuman

TSL 5

Gene SOD2, Length 4,302 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-216ENST00000546260 ANTXR1Q9H6X2 564 aa12.75□□□□□ -0.37
SOD2-216ENST00000546260 NOL7Q9UMY1 257 aaKnown RBP12.75□□□□□ -0.37
SOD2-216ENST00000546260 PANK3Q9H999 370 aa12.75□□□□□ -0.37
SOD2-216ENST00000546260 SYCE3A1L190 88 aa12.75□□□□□ -0.37
SOD2-216ENST00000546260 ZNF830Q96NB3 372 aaPredicted RBP12.75□□□□□ -0.37
SOD2-216ENST00000546260 TRIM6-TRIM34B2RNG4 842 aa12.74□□□□□ -0.37
SOD2-216ENST00000546260 U2SURPO15042 1029 aaKnown RBP12.74□□□□□ -0.37
SOD2-216ENST00000546260 DNAJC2Q99543 621 aaKnown RBP12.74□□□□□ -0.37
SOD2-216ENST00000546260 TRIM34Q9BYJ4 488 aa12.74□□□□□ -0.37
SOD2-216ENST00000546260 TIGD1Q96MW7 591 aa12.74□□□□□ -0.37
SOD2-216ENST00000546260 CIZ1Q9ULV3 898 aaPredicted RBP12.74□□□□□ -0.37
SOD2-216ENST00000546260 NCOA2Q15596 1464 aa12.73□□□□□ -0.37
SOD2-216ENST00000546260 U2AF2P26368 475 aaKnown RBP eCLIP12.73□□□□□ -0.371e-11■□□□□ 9.6
SOD2-216ENST00000546260 NOL8Q76FK4 1167 aaKnown RBP12.73□□□□□ -0.37
SOD2-216ENST00000546260 RBM27Q9P2N5 1060 aaKnown RBP12.73□□□□□ -0.37
SOD2-216ENST00000546260 PKD2Q13563 968 aa12.72□□□□□ -0.37
SOD2-216ENST00000546260 RRP7AQ9Y3A4 280 aaKnown RBP12.71□□□□□ -0.37
SOD2-216ENST00000546260 MCM5P33992 734 aa12.71□□□□□ -0.37
SOD2-216ENST00000546260 NUCB2P80303 420 aa12.71□□□□□ -0.37
SOD2-216ENST00000546260 JARID2Q92833 1246 aaPredicted RBP12.71□□□□□ -0.37
SOD2-216ENST00000546260 ZSCAN20P17040 1043 aaPredicted RBP12.71□□□□□ -0.37
SOD2-216ENST00000546260 PPP1R9BQ96SB3 815 aa12.71□□□□□ -0.37
SOD2-216ENST00000546260 GOLGA6L6A8MZA4 724 aa12.71□□□□□ -0.38
SOD2-216ENST00000546260 ZFP91Q96JP5 570 aaPredicted RBP12.71□□□□□ -0.38
SOD2-216ENST00000546260 NPHP1O15259 732 aa12.7□□□□□ -0.38
SOD2-216ENST00000546260 KLHL40Q2TBA0 621 aa12.7□□□□□ -0.38
SOD2-216ENST00000546260 PRIMPOLQ96LW4 560 aa12.7□□□□□ -0.38
SOD2-216ENST00000546260 LNPKQ9C0E8 428 aa12.7□□□□□ -0.38
SOD2-216ENST00000546260 ZSCAN23Q3MJ62 389 aa12.7□□□□□ -0.38
SOD2-216ENST00000546260 FGD6Q6ZV73 1430 aa12.7□□□□□ -0.38
SOD2-216ENST00000546260 PRIM1P49642 420 aaKnown RBP12.7□□□□□ -0.38
SOD2-216ENST00000546260 TSPY26PQ9H489 355 aa12.69□□□□□ -0.38
SOD2-216ENST00000546260 CALCOCO1Q9P1Z2 691 aa12.69□□□□□ -0.38
SOD2-216ENST00000546260 K7ELQ4 463 aaPredicted RBP12.69□□□□□ -0.38
SOD2-216ENST00000546260 HS1BP3Q53T59 392 aa12.69□□□□□ -0.38
SOD2-216ENST00000546260 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.69□□□□□ -0.38
SOD2-216ENST00000546260 PHF14O94880 888 aa12.69□□□□□ -0.38
SOD2-216ENST00000546260 SPC24Q8NBT2 197 aa12.69□□□□□ -0.38
SOD2-216ENST00000546260 RBSNQ9H1K0 784 aa12.69□□□□□ -0.38
SOD2-216ENST00000546260 IFT57Q9NWB7 429 aa12.69□□□□□ -0.38
SOD2-216ENST00000546260 EIF3AQ14152 1382 aaKnown RBP12.69□□□□□ -0.38
SOD2-216ENST00000546260 BAG4O95429 457 aaKnown RBP12.69□□□□□ -0.38
SOD2-216ENST00000546260 TMF1P82094 1093 aa12.69□□□□□ -0.38
SOD2-216ENST00000546260 DUSP27Q5VZP5 1158 aa12.69□□□□□ -0.38
SOD2-216ENST00000546260 MYRIPQ8NFW9 859 aa12.69□□□□□ -0.38
SOD2-216ENST00000546260 ZBTB9Q96C00 473 aa12.68□□□□□ -0.38
SOD2-216ENST00000546260 FHOD3Q2V2M9 1422 aa12.68□□□□□ -0.38
SOD2-216ENST00000546260 ZNF500O60304 480 aaPredicted RBP12.68□□□□□ -0.38
SOD2-216ENST00000546260 TMEM51Q9NW97 253 aa12.67□□□□□ -0.38
SOD2-216ENST00000546260 NOLC1Q14978 699 aaKnown RBP eCLIP12.67□□□□□ -0.38
SOD2-216ENST00000546260 C17orf53Q8N3J3 647 aaPredicted RBP12.67□□□□□ -0.38
SOD2-216ENST00000546260 PDE3AQ14432 1141 aa12.67□□□□□ -0.38
SOD2-216ENST00000546260 USP19O94966 1318 aa12.67□□□□□ -0.38
SOD2-216ENST00000546260 CASC1Q6TDU7 716 aa12.66□□□□□ -0.38
SOD2-216ENST00000546260 DHX37Q8IY37 1157 aaKnown RBP12.66□□□□□ -0.38
SOD2-216ENST00000546260 TTC12Q9H892 705 aaPredicted RBP12.66□□□□□ -0.38
SOD2-216ENST00000546260 DHX29Q7Z478 1369 aaKnown RBP12.66□□□□□ -0.38
SOD2-216ENST00000546260 HFM1A2PYH4 1435 aa12.66□□□□□ -0.38
SOD2-216ENST00000546260 ATP2B3Q16720 1220 aa12.66□□□□□ -0.38
SOD2-216ENST00000546260 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.66□□□□□ -0.38
SOD2-216ENST00000546260 SYNJ1O43426 1573 aa12.66□□□□□ -0.38
SOD2-216ENST00000546260 APBB1O00213 710 aa12.65□□□□□ -0.38
SOD2-216ENST00000546260 ANKRD45Q5TZF3 282 aa12.65□□□□□ -0.38
SOD2-216ENST00000546260 SMC4Q9NTJ3 1288 aa12.65□□□□□ -0.38
SOD2-216ENST00000546260 USP25Q9UHP3 1055 aa12.65□□□□□ -0.38
SOD2-216ENST00000546260 KIF16BQ96L93 1317 aa12.65□□□□□ -0.38
SOD2-216ENST00000546260 PATL2C9JE40 543 aaKnown RBP12.64□□□□□ -0.39
SOD2-216ENST00000546260 ST18O60284 1047 aa12.64□□□□□ -0.39
SOD2-216ENST00000546260 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.64□□□□□ -0.393e-10■□□□□ 9.2
SOD2-216ENST00000546260 CARMIL1Q5VZK9 1371 aa12.64□□□□□ -0.39
SOD2-216ENST00000546260 RAB3GAP1Q15042 981 aa12.64□□□□□ -0.39
SOD2-216ENST00000546260 GPATCH11Q8N954 259 aa12.64□□□□□ -0.39
SOD2-216ENST00000546260 BCL2L12Q9HB09 334 aa12.64□□□□□ -0.39
SOD2-216ENST00000546260 TIAM1Q13009 1591 aa12.64□□□□□ -0.39
SOD2-216ENST00000546260 TEX35Q5T0J7 233 aa12.63□□□□□ -0.39
SOD2-216ENST00000546260 GOLGA6L1Q8N7Z2 621 aa12.63□□□□□ -0.39
SOD2-216ENST00000546260 GTF2F1P35269 517 aaKnown RBP eCLIP12.63□□□□□ -0.39
SOD2-216ENST00000546260 SLFN5Q08AF3 891 aa12.63□□□□□ -0.39
SOD2-216ENST00000546260 NAIPQ13075 1403 aa12.63□□□□□ -0.39
SOD2-216ENST00000546260 TMX1Q9H3N1 280 aa12.63□□□□□ -0.39
SOD2-216ENST00000546260 HTATSF1O43719 755 aaKnown RBP12.62□□□□□ -0.39
SOD2-216ENST00000546260 AQRO60306 1485 aaKnown RBP eCLIP12.62□□□□□ -0.391e-6■■■■■ 33.2
SOD2-216ENST00000546260 TSPYL1Q9H0U9 437 aa12.62□□□□□ -0.39
SOD2-216ENST00000546260 MBD3O95983 291 aa12.62□□□□□ -0.39
SOD2-216ENST00000546260 CCDC112Q8NEF3 446 aa12.62□□□□□ -0.39
SOD2-216ENST00000546260 OGFRQ9NZT2 677 aa12.61□□□□□ -0.39
SOD2-216ENST00000546260 ZKSCAN2Q63HK3 967 aa12.61□□□□□ -0.39
SOD2-216ENST00000546260 LRPPRCP42704 1394 aaKnown RBP12.6□□□□□ -0.39
SOD2-216ENST00000546260 RBM42Q9BTD8 480 aaKnown RBP12.6□□□□□ -0.39
SOD2-216ENST00000546260 PCDHB15Q9Y5E8 787 aa12.6□□□□□ -0.39
SOD2-216ENST00000546260 IRX5P78411 483 aaPredicted RBP12.6□□□□□ -0.39
SOD2-216ENST00000546260 TPD52L1Q16890 204 aaPredicted RBP12.6□□□□□ -0.39
SOD2-216ENST00000546260 DZIP1LQ8IYY4 767 aaKnown RBP12.6□□□□□ -0.39
SOD2-216ENST00000546260 TOMM22Q9NS69 142 aa12.6□□□□□ -0.39
SOD2-216ENST00000546260 GTF2A1P52655 376 aaPredicted RBP12.59□□□□□ -0.39
SOD2-216ENST00000546260 LRSAM1Q6UWE0 723 aa12.59□□□□□ -0.39
SOD2-216ENST00000546260 C16orf45Q96MC5 204 aaPredicted RBP12.58□□□□□ -0.39
SOD2-216ENST00000546260 RIOK3O14730 519 aaKnown RBP12.58□□□□□ -0.4
SOD2-216ENST00000546260 RTF1Q92541 710 aaKnown RBP12.58□□□□□ -0.4
SOD2-216ENST00000546260 FEZ1Q99689 392 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 149.8 ms