RNA–Protein interactions for RNA: ENST00000546243.5

THRA-204, Transcript of thyroid hormone receptor alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene THRA, Length 1,909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THRA-204ENST00000546243 YEATS2Q9ULM3 1422 aa33.93■■■■□ 3.02
THRA-204ENST00000546243 CNGB1Q14028 1251 aaPredicted RBP33.92■■■■□ 3.02
THRA-204ENST00000546243 NLRP13Q86W25 1043 aa33.91■■■■□ 3.02
THRA-204ENST00000546243 SCAF11Q99590 1463 aaKnown RBP33.91■■■■□ 3.02
THRA-204ENST00000546243 KIF1BO60333 1816 aa33.89■■■■□ 3.02
THRA-204ENST00000546243 MYOM2P54296 1465 aa33.88■■■■□ 3.01
THRA-204ENST00000546243 NUDCQ9Y266 331 aa33.87■■■■□ 3.01
THRA-204ENST00000546243 MLH3Q9UHC1 1453 aa33.86■■■■□ 3.01
THRA-204ENST00000546243 PPP4R2Q9NY27 417 aa33.86■■■■□ 3.01
THRA-204ENST00000546243 ZMYM4Q5VZL5 1548 aa33.84■■■■□ 3.01
THRA-204ENST00000546243 INSRP06213 1382 aa33.83■■■■□ 3.01
THRA-204ENST00000546243 IFT172Q9UG01 1749 aa33.83■■■■□ 3.01
THRA-204ENST00000546243 HECW2Q9P2P5 1572 aa33.83■■■■□ 3.01
THRA-204ENST00000546243 EIF3AQ14152 1382 aaKnown RBP33.82■■■■□ 3
THRA-204ENST00000546243 CDCA8Q53HL2 280 aa33.82■■■■□ 3
THRA-204ENST00000546243 IRX6P78412 446 aaPredicted RBP33.81■■■■□ 3
THRA-204ENST00000546243 SYNMO15061 1565 aa33.8■■■■□ 3
THRA-204ENST00000546243 PANK3Q9H999 370 aa33.79■■■■□ 3
THRA-204ENST00000546243 SIGLEC1Q9BZZ2 1709 aa33.78■■■■□ 3
THRA-204ENST00000546243 ABCA6Q8N139 1617 aa33.78■■■■□ 3
THRA-204ENST00000546243 RNF123Q5XPI4 1314 aa33.76■■■□□ 2.99
THRA-204ENST00000546243 SLC24A1O60721 1099 aa33.75■■■□□ 2.99
THRA-204ENST00000546243 ARHGEF40Q8TER5 1519 aa33.75■■■□□ 2.99
THRA-204ENST00000546243 DIP2CQ9Y2E4 1556 aa33.73■■■□□ 2.99
THRA-204ENST00000546243 UGGT1Q9NYU2 1555 aa33.72■■■□□ 2.99
THRA-204ENST00000546243 NRXN1Q9ULB1 1477 aa33.72■■■□□ 2.99
THRA-204ENST00000546243 MROH2AA6NES4 1674 aa33.71■■■□□ 2.99
THRA-204ENST00000546243 ADGRB3O60242 1522 aa33.71■■■□□ 2.99
THRA-204ENST00000546243 KDM5AP29375 1690 aaKnown RBP33.67■■■□□ 2.98
THRA-204ENST00000546243 MYOM1P52179 1685 aa33.65■■■□□ 2.98
THRA-204ENST00000546243 PDE3BQ13370 1112 aa33.64■■■□□ 2.98
THRA-204ENST00000546243 CC2D1BQ5T0F9 858 aaKnown RBP33.64■■■□□ 2.98
THRA-204ENST00000546243 MYO3AQ8NEV4 1616 aa33.63■■■□□ 2.97
THRA-204ENST00000546243 BLMP54132 1417 aaPredicted RBP33.63■■■□□ 2.97
THRA-204ENST00000546243 SETBP1Q9Y6X0 1596 aa33.63■■■□□ 2.97
THRA-204ENST00000546243 MLECQ14165 292 aa33.62■■■□□ 2.97
THRA-204ENST00000546243 NPATQ14207 1427 aa33.61■■■□□ 2.97
THRA-204ENST00000546243 NPC1L1Q9UHC9 1359 aa33.6■■■□□ 2.97
THRA-204ENST00000546243 KNSTRNQ9Y448 316 aa33.6■■■□□ 2.97
THRA-204ENST00000546243 ABCC3O15438 1527 aa33.6■■■□□ 2.97
THRA-204ENST00000546243 ASXL1Q8IXJ9 1541 aa33.59■■■□□ 2.97
THRA-204ENST00000546243 PPLO60437 1756 aa33.58■■■□□ 2.97
THRA-204ENST00000546243 ADGRF5Q8IZF2 1346 aa33.57■■■□□ 2.96
THRA-204ENST00000546243 RBM19Q9Y4C8 960 aaKnown RBP33.57■■■□□ 2.96
THRA-204ENST00000546243 CAMSAP1Q5T5Y3 1602 aa33.56■■■□□ 2.96
THRA-204ENST00000546243 SBNO2Q9Y2G9 1366 aa33.56■■■□□ 2.96
THRA-204ENST00000546243 MYT1Q01538 1121 aa33.55■■■□□ 2.96
THRA-204ENST00000546243 CFAP70Q5T0N1 1121 aa33.54■■■□□ 2.96
THRA-204ENST00000546243 AMER1Q5JTC6 1135 aaPredicted RBP33.52■■■□□ 2.96
THRA-204ENST00000546243 RPGRIP1LQ68CZ1 1315 aa33.52■■■□□ 2.96
THRA-204ENST00000546243 ZC3H13Q5T200 1668 aaKnown RBP33.52■■■□□ 2.96
THRA-204ENST00000546243 ERVK-7P63135 1459 aa33.51■■■□□ 2.95
THRA-204ENST00000546243 NOS1P29475 1434 aa33.51■■■□□ 2.95
THRA-204ENST00000546243 PIK3C2GO75747 1445 aa33.48■■■□□ 2.95
THRA-204ENST00000546243 GGT6Q6P531 493 aa33.47■■■□□ 2.95
THRA-204ENST00000546243 KDM4FA0A1W2PPD8 638 aa33.47■■■□□ 2.95
THRA-204ENST00000546243 PIK3C2BO00750 1634 aa33.47■■■□□ 2.95
THRA-204ENST00000546243 B4GALNT3Q6L9W6 998 aa33.45■■■□□ 2.95
THRA-204ENST00000546243 PPP2R1AP30153 589 aa33.45■■■□□ 2.95
THRA-204ENST00000546243 ARHGAP31Q2M1Z3 1444 aa33.44■■■□□ 2.94
THRA-204ENST00000546243 REREQ9P2R6 1566 aa33.42■■■□□ 2.94
THRA-204ENST00000546243 CFAP65Q6ZU64 1925 aaKnown RBP33.41■■■□□ 2.94
THRA-204ENST00000546243 C14orf93Q9H972 538 aaKnown RBP33.4■■■□□ 2.94
THRA-204ENST00000546243 ADGRB1O14514 1584 aa33.39■■■□□ 2.94
THRA-204ENST00000546243 PLPPR3Q6T4P5 718 aa33.38■■■□□ 2.93
THRA-204ENST00000546243 SENP3-EIF4A1A0A087X0R7 540 aa33.37■■■□□ 2.93
THRA-204ENST00000546243 CHGAP10645 457 aaKnown RBP33.37■■■□□ 2.93
THRA-204ENST00000546243 RCAN3Q9UKA8 241 aa33.37■■■□□ 2.93
THRA-204ENST00000546243 CENPJQ9HC77 1338 aaPredicted RBP33.36■■■□□ 2.93
THRA-204ENST00000546243 RRP1P56182 461 aaKnown RBP33.36■■■□□ 2.93
THRA-204ENST00000546243 QRICH2Q9H0J4 1663 aa33.35■■■□□ 2.93
THRA-204ENST00000546243 AGLP35573 1532 aa33.34■■■□□ 2.93
THRA-204ENST00000546243 WDR43Q15061 677 aaKnown RBP eCLIP33.32■■■□□ 2.92
THRA-204ENST00000546243 ADAMTSL3P82987 1691 aa33.32■■■□□ 2.92
THRA-204ENST00000546243 NEXMIFQ5QGS0 1516 aa33.3■■■□□ 2.92
THRA-204ENST00000546243 CCDC136Q96JN2 1154 aa33.3■■■□□ 2.92
THRA-204ENST00000546243 ADAMTS8Q9UP79 889 aa33.3■■■□□ 2.92
THRA-204ENST00000546243 SALL2Q9Y467 1007 aaPredicted RBP33.28■■■□□ 2.92
THRA-204ENST00000546243 FER1L4A9Z1Z3 1794 aa33.28■■■□□ 2.92
THRA-204ENST00000546243 RIMS1Q86UR5 1692 aaKnown RBP33.28■■■□□ 2.92
THRA-204ENST00000546243 FANCIQ9NVI1 1328 aa33.26■■■□□ 2.92
THRA-204ENST00000546243 VGFO15240 615 aaPredicted RBP33.25■■■□□ 2.91
THRA-204ENST00000546243 ZFYVE9O95405 1425 aa33.25■■■□□ 2.91
THRA-204ENST00000546243 CDCA7LQ96GN5 454 aa33.22■■■□□ 2.91
THRA-204ENST00000546243 PUS7Q96PZ0 661 aaKnown RBP33.22■■■□□ 2.91
THRA-204ENST00000546243 USP32Q8NFA0 1604 aa33.22■■■□□ 2.91
THRA-204ENST00000546243 CEBPAP49715 358 aaPredicted RBP33.22■■■□□ 2.91
THRA-204ENST00000546243 SLC52A1Q9NWF4 448 aa33.22■■■□□ 2.91
THRA-204ENST00000546243 PREX1Q8TCU6 1659 aa33.2■■■□□ 2.91
THRA-204ENST00000546243 ARHGEF28Q8N1W1 1705 aaKnown RBP33.2■■■□□ 2.91
THRA-204ENST00000546243 CLTCQ00610 1675 aaKnown RBP33.2■■■□□ 2.91
THRA-204ENST00000546243 CARD14Q9BXL6 1004 aa33.19■■■□□ 2.9
THRA-204ENST00000546243 TRAK1Q9UPV9 953 aa33.19■■■□□ 2.9
THRA-204ENST00000546243 ZNF521Q96K83 1311 aa33.15■■■□□ 2.9
THRA-204ENST00000546243 ESF1Q9H501 851 aaKnown RBP33.14■■■□□ 2.9
THRA-204ENST00000546243 PLEKHH1Q9ULM0 1364 aa33.13■■■□□ 2.89
THRA-204ENST00000546243 TMEM131LA2VDJ0 1609 aa33.12■■■□□ 2.89
THRA-204ENST00000546243 NGEFQ8N5V2 710 aa33.12■■■□□ 2.89
THRA-204ENST00000546243 POLR3AO14802 1390 aaPredicted RBP33.12■■■□□ 2.89
THRA-204ENST00000546243 PTPRMP28827 1452 aa33.12■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms