RNA–Protein interactions for RNA: ENST00000546089.5

TRPT1-215, Transcript of tRNA phosphotransferase 1, humanhuman

TSL 3 BASIC

Gene TRPT1, Length 684 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPT1-215ENST00000546089 RPRD2Q5VT52 1461 aaKnown RBP16.53■□□□□ 0.24
TRPT1-215ENST00000546089 SLIT1O75093 1534 aa16.52■□□□□ 0.24
TRPT1-215ENST00000546089 LTKP29376 864 aa16.52■□□□□ 0.24
TRPT1-215ENST00000546089 ARHGAP23Q9P227 1491 aa16.52■□□□□ 0.23
TRPT1-215ENST00000546089 LRRC7Q96NW7 1537 aa16.51■□□□□ 0.23
TRPT1-215ENST00000546089 TET3O43151 1660 aa16.5■□□□□ 0.23
TRPT1-215ENST00000546089 NEUROD1Q13562 356 aa16.5■□□□□ 0.23
TRPT1-215ENST00000546089 TONSLQ96HA7 1378 aa16.5■□□□□ 0.23
TRPT1-215ENST00000546089 ADGRB3O60242 1522 aa16.5■□□□□ 0.23
TRPT1-215ENST00000546089 HSPA1LP34931 641 aa16.49■□□□□ 0.23
TRPT1-215ENST00000546089 FOXD1Q16676 465 aa16.49■□□□□ 0.23
TRPT1-215ENST00000546089 TXNDC2Q86VQ3 553 aa16.49■□□□□ 0.23
TRPT1-215ENST00000546089 STAG3Q9UJ98 1225 aa16.49■□□□□ 0.23
TRPT1-215ENST00000546089 E9PCH4 1651 aa16.49■□□□□ 0.23
TRPT1-215ENST00000546089 KDM5AP29375 1690 aaKnown RBP16.48■□□□□ 0.23
TRPT1-215ENST00000546089 MED1Q15648 1581 aaPredicted RBP16.46■□□□□ 0.23
TRPT1-215ENST00000546089 IDI1Q13907 227 aa16.45■□□□□ 0.22
TRPT1-215ENST00000546089 TMEM2Q9UHN6 1383 aa16.45■□□□□ 0.22
TRPT1-215ENST00000546089 NOS1P29475 1434 aa16.45■□□□□ 0.22
TRPT1-215ENST00000546089 TOM1O60784 492 aa16.44■□□□□ 0.22
TRPT1-215ENST00000546089 PPP1R15AO75807 674 aaPredicted RBP16.43■□□□□ 0.22
TRPT1-215ENST00000546089 RBM33Q96EV2 1170 aaKnown RBP16.42■□□□□ 0.22
TRPT1-215ENST00000546089 EID1Q9Y6B2 187 aa16.42■□□□□ 0.22
TRPT1-215ENST00000546089 CCDC144AA2RUR9 1427 aa16.42■□□□□ 0.22
TRPT1-215ENST00000546089 TMEM131LA2VDJ0 1609 aa16.41■□□□□ 0.22
TRPT1-215ENST00000546089 TRPM2O94759 1503 aa16.41■□□□□ 0.22
TRPT1-215ENST00000546089 SLC26A8Q96RN1 970 aa16.4■□□□□ 0.22
TRPT1-215ENST00000546089 BCANQ96GW7 911 aa16.38■□□□□ 0.21
TRPT1-215ENST00000546089 SPHKAPQ2M3C7 1700 aa16.37■□□□□ 0.21
TRPT1-215ENST00000546089 CHGAP10645 457 aaKnown RBP16.37■□□□□ 0.21
TRPT1-215ENST00000546089 NUTM2DQ5VT03 806 aaPredicted RBP16.37■□□□□ 0.21
TRPT1-215ENST00000546089 L3MBTL2Q969R5 705 aa16.37■□□□□ 0.21
TRPT1-215ENST00000546089 NWD1Q149M9 1564 aa16.36■□□□□ 0.21
TRPT1-215ENST00000546089 CHD2O14647 1828 aaKnown RBP16.35■□□□□ 0.21
TRPT1-215ENST00000546089 RIMS2Q9UQ26 1411 aa16.35■□□□□ 0.21
TRPT1-215ENST00000546089 ROBO1Q9Y6N7 1651 aa16.34■□□□□ 0.21
TRPT1-215ENST00000546089 TMEM94Q12767 1356 aa16.34■□□□□ 0.21
TRPT1-215ENST00000546089 ZFYVE9O95405 1425 aa16.34■□□□□ 0.21
TRPT1-215ENST00000546089 SOCS7O14512 581 aa16.32■□□□□ 0.2
TRPT1-215ENST00000546089 SPATA31E1Q6ZUB1 1445 aa16.31■□□□□ 0.2
TRPT1-215ENST00000546089 SLC52A1Q9NWF4 448 aa16.31■□□□□ 0.2
TRPT1-215ENST00000546089 PROSER2Q86WR7 435 aaPredicted RBP16.3■□□□□ 0.2
TRPT1-215ENST00000546089 CLTCL1P53675 1640 aa16.3■□□□□ 0.2
TRPT1-215ENST00000546089 ZNF316A6NFI3 1004 aaPredicted RBP16.29■□□□□ 0.2
TRPT1-215ENST00000546089 STAC3Q96MF2 364 aa16.29■□□□□ 0.2
TRPT1-215ENST00000546089 KCNA6P17658 529 aa16.28■□□□□ 0.2
TRPT1-215ENST00000546089 NKTRP30414 1462 aaKnown RBP16.28■□□□□ 0.2
TRPT1-215ENST00000546089 PLEKHG1Q9ULL1 1385 aa16.27■□□□□ 0.2
TRPT1-215ENST00000546089 PHLPP1O60346 1717 aa16.27■□□□□ 0.19
TRPT1-215ENST00000546089 PHF23Q9BUL5 403 aaPredicted RBP16.26■□□□□ 0.19
TRPT1-215ENST00000546089 NRXN3Q9Y4C0 1643 aa16.26■□□□□ 0.19
TRPT1-215ENST00000546089 ADAMTS13Q76LX8 1427 aa16.24■□□□□ 0.19
TRPT1-215ENST00000546089 KIF1BO60333 1816 aa16.24■□□□□ 0.19
TRPT1-215ENST00000546089 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.23■□□□□ 0.19
TRPT1-215ENST00000546089 DIP2AQ14689 1571 aa16.22■□□□□ 0.19
TRPT1-215ENST00000546089 NBPF8Q3BBV2 869 aa16.22■□□□□ 0.19
TRPT1-215ENST00000546089 RALGAPBQ86X10 1494 aa16.22■□□□□ 0.19
TRPT1-215ENST00000546089 PRAG1Q86YV5 1406 aa16.21■□□□□ 0.19
TRPT1-215ENST00000546089 MSH6P52701 1360 aa16.21■□□□□ 0.19
TRPT1-215ENST00000546089 DCAF11Q8TEB1 546 aa16.2■□□□□ 0.18
TRPT1-215ENST00000546089 PTPRUQ92729 1446 aa16.19■□□□□ 0.18
TRPT1-215ENST00000546089 RGL3Q3MIN7 710 aa16.19■□□□□ 0.18
TRPT1-215ENST00000546089 C14orf37Q86TY3 774 aa16.19■□□□□ 0.18
TRPT1-215ENST00000546089 XRN1Q8IZH2 1706 aaKnown RBP16.19■□□□□ 0.18
TRPT1-215ENST00000546089 FAM135BQ49AJ0 1406 aa16.19■□□□□ 0.18
TRPT1-215ENST00000546089 MYOM2P54296 1465 aa16.18■□□□□ 0.18
TRPT1-215ENST00000546089 ZNF326Q5BKZ1 582 aaKnown RBP16.18■□□□□ 0.18
TRPT1-215ENST00000546089 NEXMIFQ5QGS0 1516 aa16.18■□□□□ 0.18
TRPT1-215ENST00000546089 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.17■□□□□ 0.18
TRPT1-215ENST00000546089 RPGRIP1LQ68CZ1 1315 aa16.17■□□□□ 0.18
TRPT1-215ENST00000546089 COL16A1Q07092 1604 aaPredicted RBP16.16■□□□□ 0.18
TRPT1-215ENST00000546089 SETD1AO15047 1707 aaKnown RBP16.15■□□□□ 0.18
TRPT1-215ENST00000546089 HDGFP51858 240 aaKnown RBP16.15■□□□□ 0.18
TRPT1-215ENST00000546089 NALCNQ8IZF0 1738 aa16.15■□□□□ 0.18
TRPT1-215ENST00000546089 TBX22Q9Y458 520 aa16.15■□□□□ 0.18
TRPT1-215ENST00000546089 SETBP1Q9Y6X0 1596 aa16.15■□□□□ 0.18
TRPT1-215ENST00000546089 GPRASP1Q5JY77 1395 aa16.14■□□□□ 0.17
TRPT1-215ENST00000546089 EIF4G2P78344 907 aaKnown RBP eCLIP16.14■□□□□ 0.17
TRPT1-215ENST00000546089 KDM2AQ9Y2K7 1162 aa16.14■□□□□ 0.17
TRPT1-215ENST00000546089 TRPM1Q7Z4N2 1603 aa16.13■□□□□ 0.17
TRPT1-215ENST00000546089 SLAIN2Q9P270 581 aa16.13■□□□□ 0.17
TRPT1-215ENST00000546089 RGS17Q9UGC6 210 aaPredicted RBP16.13■□□□□ 0.17
TRPT1-215ENST00000546089 NRXN1Q9ULB1 1477 aa16.13■□□□□ 0.17
TRPT1-215ENST00000546089 IFT172Q9UG01 1749 aa16.13■□□□□ 0.17
TRPT1-215ENST00000546089 LAMC1P11047 1609 aa16.12■□□□□ 0.17
TRPT1-215ENST00000546089 AMOTL2Q9Y2J4 779 aa16.12■□□□□ 0.17
TRPT1-215ENST00000546089 PPLO60437 1756 aa16.12■□□□□ 0.17
TRPT1-215ENST00000546089 METP08581 1390 aa16.11■□□□□ 0.17
TRPT1-215ENST00000546089 KIAA1210Q9ULL0 1709 aa16.09■□□□□ 0.17
TRPT1-215ENST00000546089 ROCK2O75116 1388 aaKnown RBP16.09■□□□□ 0.17
TRPT1-215ENST00000546089 HSPA5P11021 654 aaKnown RBP16.08■□□□□ 0.16
TRPT1-215ENST00000546089 USP47Q96K76 1375 aa16.08■□□□□ 0.16
TRPT1-215ENST00000546089 LRP6O75581 1613 aa16.08■□□□□ 0.16
TRPT1-215ENST00000546089 AHDC1Q5TGY3 1603 aaPredicted RBP16.08■□□□□ 0.16
TRPT1-215ENST00000546089 CARD11Q9BXL7 1154 aa16.07■□□□□ 0.16
TRPT1-215ENST00000546089 PIK3R4Q99570 1358 aa16.07■□□□□ 0.16
TRPT1-215ENST00000546089 SHPRHQ149N8 1683 aa16.07■□□□□ 0.16
TRPT1-215ENST00000546089 NHSL1Q5SYE7 1610 aa16.06■□□□□ 0.16
TRPT1-215ENST00000546089 ATF3P18847 181 aa16.06■□□□□ 0.16
TRPT1-215ENST00000546089 PIK3C2GO75747 1445 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 172 ms