RNA–Protein interactions for RNA: ENST00000545720.6

RAP1B-233, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 5

Gene RAP1B, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-233ENST00000545720 NWD1Q149M9 1564 aa36.53■■■■□ 3.44
RAP1B-233ENST00000545720 ZFYVE9O95405 1425 aa36.52■■■■□ 3.44
RAP1B-233ENST00000545720 TMEM94Q12767 1356 aa36.52■■■■□ 3.44
RAP1B-233ENST00000545720 KCNA6P17658 529 aa36.51■■■■□ 3.44
RAP1B-233ENST00000545720 PPARGC1BQ86YN6 1023 aaKnown RBP36.51■■■■□ 3.44
RAP1B-233ENST00000545720 BCANQ96GW7 911 aa36.51■■■■□ 3.44
RAP1B-233ENST00000545720 ITGAEP38570 1179 aa36.5■■■■□ 3.43
RAP1B-233ENST00000545720 RIMS2Q9UQ26 1411 aa36.49■■■■□ 3.43
RAP1B-233ENST00000545720 CHD2O14647 1828 aaKnown RBP36.48■■■■□ 3.43
RAP1B-233ENST00000545720 NKTRP30414 1462 aaKnown RBP36.48■■■■□ 3.43
RAP1B-233ENST00000545720 PROSER2Q86WR7 435 aaPredicted RBP36.45■■■■□ 3.43
RAP1B-233ENST00000545720 PLEKHG1Q9ULL1 1385 aa36.44■■■■□ 3.42
RAP1B-233ENST00000545720 PPP1R15AO75807 674 aaPredicted RBP36.44■■■■□ 3.42
RAP1B-233ENST00000545720 RBM33Q96EV2 1170 aaKnown RBP36.43■■■■□ 3.42
RAP1B-233ENST00000545720 CHGAP10645 457 aaKnown RBP36.42■■■■□ 3.42
RAP1B-233ENST00000545720 PHF23Q9BUL5 403 aaPredicted RBP36.41■■■■□ 3.42
RAP1B-233ENST00000545720 ROBO1Q9Y6N7 1651 aa36.41■■■■□ 3.42
RAP1B-233ENST00000545720 NUP155O75694 1391 aa36.4■■■■□ 3.42
RAP1B-233ENST00000545720 HDGFP51858 240 aaKnown RBP36.38■■■■□ 3.41
RAP1B-233ENST00000545720 FAM135BQ49AJ0 1406 aa36.37■■■■□ 3.41
RAP1B-233ENST00000545720 SPHKAPQ2M3C7 1700 aa36.35■■■■□ 3.41
RAP1B-233ENST00000545720 NUTM2DQ5VT03 806 aaPredicted RBP36.32■■■■□ 3.4
RAP1B-233ENST00000545720 MSH6P52701 1360 aa36.31■■■■□ 3.4
RAP1B-233ENST00000545720 ABCF1Q8NE71 845 aaKnown RBP eCLIP36.31■■■■□ 3.4
RAP1B-233ENST00000545720 DIP2AQ14689 1571 aa36.3■■■■□ 3.4
RAP1B-233ENST00000545720 ADAMTS13Q76LX8 1427 aa36.26■■■■□ 3.4
RAP1B-233ENST00000545720 TBX22Q9Y458 520 aa36.25■■■■□ 3.39
RAP1B-233ENST00000545720 PHLPP1O60346 1717 aa36.22■■■■□ 3.39
RAP1B-233ENST00000545720 RRBP1Q9P2E9 1410 aaKnown RBP36.2■■■■□ 3.39
RAP1B-233ENST00000545720 TRPM2O94759 1503 aa36.19■■■■□ 3.38
RAP1B-233ENST00000545720 SIPA1L2Q9P2F8 1722 aaPredicted RBP36.17■■■■□ 3.38
RAP1B-233ENST00000545720 SLAIN2Q9P270 581 aa36.16■■■■□ 3.38
RAP1B-233ENST00000545720 NRXN3Q9Y4C0 1643 aa36.16■■■■□ 3.38
RAP1B-233ENST00000545720 PIK3R4Q99570 1358 aa36.15■■■■□ 3.38
RAP1B-233ENST00000545720 CLTCL1P53675 1640 aa36.13■■■■□ 3.37
RAP1B-233ENST00000545720 C14orf37Q86TY3 774 aa36.13■■■■□ 3.37
RAP1B-233ENST00000545720 NCOA3Q9Y6Q9 1424 aa36.13■■■■□ 3.37
RAP1B-233ENST00000545720 KIF1BO60333 1816 aa36.11■■■■□ 3.37
RAP1B-233ENST00000545720 SETBP1Q9Y6X0 1596 aa36.1■■■■□ 3.37
RAP1B-233ENST00000545720 NAIPQ13075 1403 aa36.09■■■■□ 3.37
RAP1B-233ENST00000545720 RGS17Q9UGC6 210 aaPredicted RBP36.09■■■■□ 3.37
RAP1B-233ENST00000545720 XRN1Q8IZH2 1706 aaKnown RBP36.08■■■■□ 3.37
RAP1B-233ENST00000545720 PTPRUQ92729 1446 aa36.08■■■■□ 3.37
RAP1B-233ENST00000545720 ZNF326Q5BKZ1 582 aaKnown RBP36.06■■■■□ 3.36
RAP1B-233ENST00000545720 COL16A1Q07092 1604 aaPredicted RBP36.05■■■■□ 3.36
RAP1B-233ENST00000545720 AMOTL2Q9Y2J4 779 aa36.03■■■■□ 3.36
RAP1B-233ENST00000545720 NEXMIFQ5QGS0 1516 aa36.02■■■■□ 3.36
RAP1B-233ENST00000545720 C19orf44Q9H6X5 657 aa36■■■■□ 3.35
RAP1B-233ENST00000545720 CADPS2Q86UW7 1296 aa35.99■■■■□ 3.35
RAP1B-233ENST00000545720 ATF3P18847 181 aa35.98■■■■□ 3.35
RAP1B-233ENST00000545720 JCADQ9P266 1359 aa35.97■■■■□ 3.35
RAP1B-233ENST00000545720 AHDC1Q5TGY3 1603 aaPredicted RBP35.95■■■■□ 3.35
RAP1B-233ENST00000545720 HFM1A2PYH4 1435 aa35.95■■■■□ 3.35
RAP1B-233ENST00000545720 METP08581 1390 aa35.92■■■■□ 3.34
RAP1B-233ENST00000545720 TRIM52Q96A61 297 aa35.92■■■■□ 3.34
RAP1B-233ENST00000545720 DCCP43146 1447 aa35.9■■■■□ 3.34
RAP1B-233ENST00000545720 SHPRHQ149N8 1683 aa35.88■■■■□ 3.33
RAP1B-233ENST00000545720 POTEAQ6S8J7 498 aa35.88■■■■□ 3.33
RAP1B-233ENST00000545720 NALCNQ8IZF0 1738 aa35.87■■■■□ 3.33
RAP1B-233ENST00000545720 SETD1AO15047 1707 aaKnown RBP35.86■■■■□ 3.33
RAP1B-233ENST00000545720 PPLO60437 1756 aa35.83■■■■□ 3.33
RAP1B-233ENST00000545720 BRINP3Q76B58 766 aa35.82■■■■□ 3.32
RAP1B-233ENST00000545720 LRP6O75581 1613 aa35.82■■■■□ 3.32
RAP1B-233ENST00000545720 ASXL1Q8IXJ9 1541 aa35.82■■■■□ 3.32
RAP1B-233ENST00000545720 SLC4A1APQ9BWU0 796 aaKnown RBP35.81■■■■□ 3.32
RAP1B-233ENST00000545720 MST1RQ04912 1400 aa35.8■■■■□ 3.32
RAP1B-233ENST00000545720 NHSL1Q5SYE7 1610 aa35.79■■■■□ 3.32
RAP1B-233ENST00000545720 ADGRL3Q9HAR2 1447 aa35.78■■■■□ 3.32
RAP1B-233ENST00000545720 SPATA31A6Q5VVP1 1343 aa35.78■■■■□ 3.32
RAP1B-233ENST00000545720 VGFO15240 615 aaPredicted RBP35.73■■■■□ 3.31
RAP1B-233ENST00000545720 MEX3CQ5U5Q3 659 aaKnown RBP35.71■■■■□ 3.31
RAP1B-233ENST00000545720 PTCH1Q13635 1447 aa35.68■■■■□ 3.3
RAP1B-233ENST00000545720 RPGRIP1LQ68CZ1 1315 aa35.67■■■■□ 3.3
RAP1B-233ENST00000545720 FOXD1Q16676 465 aa35.67■■■■□ 3.3
RAP1B-233ENST00000545720 SETD5Q9C0A6 1442 aa35.64■■■■□ 3.3
RAP1B-233ENST00000545720 ROBO2Q9HCK4 1378 aa35.64■■■■□ 3.3
RAP1B-233ENST00000545720 IFT172Q9UG01 1749 aa35.62■■■■□ 3.29
RAP1B-233ENST00000545720 NUTM2BA6NNL0 878 aaPredicted RBP35.61■■■■□ 3.29
RAP1B-233ENST00000545720 NUTM2EB1AL46 878 aaPredicted RBP35.61■■■■□ 3.29
RAP1B-233ENST00000545720 NUTM2AQ8IVF1 878 aaPredicted RBP35.61■■■■□ 3.29
RAP1B-233ENST00000545720 CCDC144AA2RUR9 1427 aa35.59■■■■□ 3.29
RAP1B-233ENST00000545720 PRAG1Q86YV5 1406 aa35.59■■■■□ 3.29
RAP1B-233ENST00000545720 DDX17Q92841 729 aaKnown RBP35.59■■■■□ 3.29
RAP1B-233ENST00000545720 C1orf167Q5SNV9 1468 aa35.58■■■■□ 3.29
RAP1B-233ENST00000545720 ZNF772Q68DY9 489 aaPredicted RBP35.57■■■■□ 3.28
RAP1B-233ENST00000545720 LAMC1P11047 1609 aa35.55■■■■□ 3.28
RAP1B-233ENST00000545720 LRRC59Q96AG4 307 aaKnown RBP35.54■■■■□ 3.28
RAP1B-233ENST00000545720 SPATA31E1Q6ZUB1 1445 aa35.51■■■■□ 3.28
RAP1B-233ENST00000545720 MPHOSPH9Q99550 1183 aa35.51■■■■□ 3.28
RAP1B-233ENST00000545720 PNPLA6Q8IY17 1366 aa35.51■■■■□ 3.27
RAP1B-233ENST00000545720 ADGRF5Q8IZF2 1346 aa35.5■■■■□ 3.27
RAP1B-233ENST00000545720 RGL3Q3MIN7 710 aa35.49■■■■□ 3.27
RAP1B-233ENST00000545720 CDC42BPGQ6DT37 1551 aa35.46■■■■□ 3.27
RAP1B-233ENST00000545720 ORAI2Q96SN7 254 aa35.45■■■■□ 3.27
RAP1B-233ENST00000545720 KNDC1Q76NI1 1749 aa35.44■■■■□ 3.26
RAP1B-233ENST00000545720 AFF2P51816 1311 aa35.44■■■■□ 3.26
RAP1B-233ENST00000545720 ANKRD30BQ9BXX2 1392 aa35.43■■■■□ 3.26
RAP1B-233ENST00000545720 C8orf37Q96NL8 207 aa35.39■■■■□ 3.26
RAP1B-233ENST00000545720 RXRBP28702 533 aa35.38■■■■□ 3.25
RAP1B-233ENST00000545720 STK26Q9P289 416 aa35.38■■■■□ 3.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms