RNA–Protein interactions for RNA: ENST00000544725.5

COPS7A-220, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-220ENST00000544725 CHIC2Q9UKJ5 165 aa22.9■■□□□ 1.26
COPS7A-220ENST00000544725 PHLPP1O60346 1717 aa22.88■■□□□ 1.25
COPS7A-220ENST00000544725 LOC105371045A0A1W2PR82 267 aa22.87■■□□□ 1.25
COPS7A-220ENST00000544725 HDGFP51858 240 aaKnown RBP22.87■■□□□ 1.25
COPS7A-220ENST00000544725 APLP2Q06481 763 aa22.87■■□□□ 1.25
COPS7A-220ENST00000544725 FGD6Q6ZV73 1430 aa22.87■■□□□ 1.25
COPS7A-220ENST00000544725 PLEKHG1Q9ULL1 1385 aa22.86■■□□□ 1.25
COPS7A-220ENST00000544725 PPP1R15AO75807 674 aaPredicted RBP22.85■■□□□ 1.25
COPS7A-220ENST00000544725 ZFYVE9O95405 1425 aa22.83■■□□□ 1.25
COPS7A-220ENST00000544725 NCOA3Q9Y6Q9 1424 aa22.83■■□□□ 1.25
COPS7A-220ENST00000544725 SETD1AO15047 1707 aaKnown RBP22.83■■□□□ 1.25
COPS7A-220ENST00000544725 RPRD2Q5VT52 1461 aaKnown RBP22.83■■□□□ 1.25
COPS7A-220ENST00000544725 SPATA31A6Q5VVP1 1343 aa22.82■■□□□ 1.24
COPS7A-220ENST00000544725 RIMS2Q9UQ26 1411 aa22.82■■□□□ 1.24
COPS7A-220ENST00000544725 MEX3CQ5U5Q3 659 aaKnown RBP22.81■■□□□ 1.24
COPS7A-220ENST00000544725 ZNF772Q68DY9 489 aaPredicted RBP22.81■■□□□ 1.24
COPS7A-220ENST00000544725 C14orf37Q86TY3 774 aa22.81■■□□□ 1.24
COPS7A-220ENST00000544725 TBX22Q9Y458 520 aa22.81■■□□□ 1.24
COPS7A-220ENST00000544725 COL16A1Q07092 1604 aaPredicted RBP22.8■■□□□ 1.24
COPS7A-220ENST00000544725 CHD2O14647 1828 aaKnown RBP22.79■■□□□ 1.24
COPS7A-220ENST00000544725 CADPS2Q86UW7 1296 aa22.78■■□□□ 1.24
COPS7A-220ENST00000544725 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.78■■□□□ 1.24
COPS7A-220ENST00000544725 ADGRL2O95490 1459 aa22.78■■□□□ 1.24
COPS7A-220ENST00000544725 LRP6O75581 1613 aa22.77■■□□□ 1.24
COPS7A-220ENST00000544725 ANKRD50Q9ULJ7 1429 aa22.75■■□□□ 1.23
COPS7A-220ENST00000544725 ATF3P18847 181 aa22.75■■□□□ 1.23
COPS7A-220ENST00000544725 UPF1Q92900 1129 aaKnown RBP eCLIP22.75■■□□□ 1.23
COPS7A-220ENST00000544725 C19orf44Q9H6X5 657 aa22.75■■□□□ 1.23
COPS7A-220ENST00000544725 TMEM131LA2VDJ0 1609 aa22.73■■□□□ 1.23
COPS7A-220ENST00000544725 CHGAP10645 457 aaKnown RBP22.73■■□□□ 1.23
COPS7A-220ENST00000544725 TRIM52Q96A61 297 aa22.73■■□□□ 1.23
COPS7A-220ENST00000544725 AHDC1Q5TGY3 1603 aaPredicted RBP22.72■■□□□ 1.23
COPS7A-220ENST00000544725 GCC2Q8IWJ2 1684 aa22.72■■□□□ 1.23
COPS7A-220ENST00000544725 PIK3R4Q99570 1358 aa22.72■■□□□ 1.23
COPS7A-220ENST00000544725 MYO5BQ9ULV0 1848 aa22.71■■□□□ 1.23
COPS7A-220ENST00000544725 RXRBP28702 533 aa22.7■■□□□ 1.22
COPS7A-220ENST00000544725 ADAMTS13Q76LX8 1427 aa22.7■■□□□ 1.22
COPS7A-220ENST00000544725 DIP2AQ14689 1571 aa22.7■■□□□ 1.22
COPS7A-220ENST00000544725 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.68■■□□□ 1.22
COPS7A-220ENST00000544725 SHPRHQ149N8 1683 aa22.68■■□□□ 1.22
COPS7A-220ENST00000544725 FAM50AQ14320 339 aaKnown RBP22.68■■□□□ 1.22
COPS7A-220ENST00000544725 NUTM2DQ5VT03 806 aaPredicted RBP22.67■■□□□ 1.22
COPS7A-220ENST00000544725 BRINP3Q76B58 766 aa22.65■■□□□ 1.22
COPS7A-220ENST00000544725 NUTM2BA6NNL0 878 aaPredicted RBP22.64■■□□□ 1.21
COPS7A-220ENST00000544725 NUTM2EB1AL46 878 aaPredicted RBP22.64■■□□□ 1.21
COPS7A-220ENST00000544725 NUTM2AQ8IVF1 878 aaPredicted RBP22.64■■□□□ 1.21
COPS7A-220ENST00000544725 AMOTL2Q9Y2J4 779 aa22.64■■□□□ 1.21
COPS7A-220ENST00000544725 TRPM2O94759 1503 aa22.63■■□□□ 1.21
COPS7A-220ENST00000544725 CDK12Q9NYV4 1490 aaPredicted RBP22.63■■□□□ 1.21
COPS7A-220ENST00000544725 DCCP43146 1447 aa22.61■■□□□ 1.21
COPS7A-220ENST00000544725 AFF2P51816 1311 aa22.59■■□□□ 1.21
COPS7A-220ENST00000544725 UNC13BO14795 1591 aa22.59■■□□□ 1.21
COPS7A-220ENST00000544725 PTPRUQ92729 1446 aa22.58■■□□□ 1.21
COPS7A-220ENST00000544725 SETD5Q9C0A6 1442 aa22.57■■□□□ 1.2
COPS7A-220ENST00000544725 ASXL1Q8IXJ9 1541 aa22.57■■□□□ 1.2
COPS7A-220ENST00000544725 E9PCH4 1651 aa22.56■■□□□ 1.2
COPS7A-220ENST00000544725 LRRC59Q96AG4 307 aaKnown RBP22.56■■□□□ 1.2
COPS7A-220ENST00000544725 MST1RQ04912 1400 aa22.53■■□□□ 1.2
COPS7A-220ENST00000544725 IQGAP3Q86VI3 1631 aa22.51■■□□□ 1.19
COPS7A-220ENST00000544725 RBM6P78332 1123 aaKnown RBP22.51■■□□□ 1.19
COPS7A-220ENST00000544725 C8orf37Q96NL8 207 aa22.51■■□□□ 1.19
COPS7A-220ENST00000544725 ROCK1Q13464 1354 aa22.5■■□□□ 1.19
COPS7A-220ENST00000544725 SRCAPQ6ZRS2 3230 aa22.5■■□□□ 1.19
COPS7A-220ENST00000544725 QTRT2Q9H974 415 aaKnown RBP22.5■■□□□ 1.19
COPS7A-220ENST00000544725 NUP155O75694 1391 aa22.5■■□□□ 1.19
COPS7A-220ENST00000544725 NHSL1Q5SYE7 1610 aa22.49■■□□□ 1.19
COPS7A-220ENST00000544725 XRN1Q8IZH2 1706 aaKnown RBP22.49■■□□□ 1.19
COPS7A-220ENST00000544725 RGS12O14924 1447 aa22.48■■□□□ 1.19
COPS7A-220ENST00000544725 SETBP1Q9Y6X0 1596 aa22.48■■□□□ 1.19
COPS7A-220ENST00000544725 PNPLA6Q8IY17 1366 aa22.48■■□□□ 1.19
COPS7A-220ENST00000544725 ZNF326Q5BKZ1 582 aaKnown RBP22.46■■□□□ 1.19
COPS7A-220ENST00000544725 ADGRL3Q9HAR2 1447 aa22.46■■□□□ 1.19
COPS7A-220ENST00000544725 NRXN3Q9Y4C0 1643 aa22.46■■□□□ 1.19
COPS7A-220ENST00000544725 METP08581 1390 aa22.45■■□□□ 1.18
COPS7A-220ENST00000544725 DDX17Q92841 729 aaKnown RBP22.44■■□□□ 1.18
COPS7A-220ENST00000544725 NGLY1Q96IV0 654 aa22.43■■□□□ 1.18
COPS7A-220ENST00000544725 ADAMTS2O95450 1211 aa22.4■■□□□ 1.18
COPS7A-220ENST00000544725 ATAD2Q6PL18 1390 aa22.38■■□□□ 1.17
COPS7A-220ENST00000544725 C1orf167Q5SNV9 1468 aa22.37■■□□□ 1.17
COPS7A-220ENST00000544725 FOXD1Q16676 465 aa22.36■■□□□ 1.17
COPS7A-220ENST00000544725 SPHKAPQ2M3C7 1700 aa22.35■■□□□ 1.17
COPS7A-220ENST00000544725 NALCNQ8IZF0 1738 aa22.35■■□□□ 1.17
COPS7A-220ENST00000544725 USP21Q9UK80 565 aa22.35■■□□□ 1.17
COPS7A-220ENST00000544725 ITGAEP38570 1179 aa22.34■■□□□ 1.17
COPS7A-220ENST00000544725 TRPC5Q9UL62 973 aaPredicted RBP22.34■■□□□ 1.17
COPS7A-220ENST00000544725 SOS2Q07890 1332 aaPredicted RBP22.33■■□□□ 1.17
COPS7A-220ENST00000544725 PTCH1Q13635 1447 aa22.32■■□□□ 1.16
COPS7A-220ENST00000544725 NEXMIFQ5QGS0 1516 aa22.31■■□□□ 1.16
COPS7A-220ENST00000544725 FNBP4Q8N3X1 1017 aaPredicted RBP22.31■■□□□ 1.16
COPS7A-220ENST00000544725 LAMC1P11047 1609 aa22.31■■□□□ 1.16
COPS7A-220ENST00000544725 ORAI2Q96SN7 254 aa22.3■■□□□ 1.16
COPS7A-220ENST00000544725 ZRANB1Q9UGI0 708 aa22.29■■□□□ 1.16
COPS7A-220ENST00000544725 ROBO2Q9HCK4 1378 aa22.26■■□□□ 1.15
COPS7A-220ENST00000544725 ATRNO75882 1429 aa22.26■■□□□ 1.15
COPS7A-220ENST00000544725 VGFO15240 615 aaPredicted RBP22.26■■□□□ 1.15
COPS7A-220ENST00000544725 CLTCL1P53675 1640 aa22.26■■□□□ 1.15
COPS7A-220ENST00000544725 EP400Q96L91 3159 aa22.26■■□□□ 1.15
COPS7A-220ENST00000544725 CCDC125Q86Z20 511 aa22.24■■□□□ 1.15
COPS7A-220ENST00000544725 PRAG1Q86YV5 1406 aa22.23■■□□□ 1.15
COPS7A-220ENST00000544725 NPHP3Q7Z494 1330 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms