RNA–Protein interactions for RNA: ENST00000544487.5

CCDC189-207, Transcript of coiled-coil domain containing 189, humanhuman

TSL 2

Gene CCDC189, Length 2,114 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189-207ENST00000544487 DIP2CQ9Y2E4 1556 aa28.4■■■□□ 2.14
CCDC189-207ENST00000544487 RICTORQ6R327 1708 aa28.4■■■□□ 2.14
CCDC189-207ENST00000544487 ABCC3O15438 1527 aa28.39■■■□□ 2.14
CCDC189-207ENST00000544487 CFAP70Q5T0N1 1121 aa28.39■■■□□ 2.13
CCDC189-207ENST00000544487 IRX6P78412 446 aaPredicted RBP28.37■■■□□ 2.13
CCDC189-207ENST00000544487 RIMBP3CA6NJZ7 1639 aa28.37■■■□□ 2.13
CCDC189-207ENST00000544487 RIMBP3BA6NNM3 1639 aa28.37■■■□□ 2.13
CCDC189-207ENST00000544487 RIMBP3Q9UFD9 1639 aa28.37■■■□□ 2.13
CCDC189-207ENST00000544487 ADGRB3O60242 1522 aa28.37■■■□□ 2.13
CCDC189-207ENST00000544487 CHGAP10645 457 aaKnown RBP28.37■■■□□ 2.13
CCDC189-207ENST00000544487 CC2D1BQ5T0F9 858 aaKnown RBP28.37■■■□□ 2.13
CCDC189-207ENST00000544487 EIF3AQ14152 1382 aaKnown RBP28.36■■■□□ 2.13
CCDC189-207ENST00000544487 NLRP13Q86W25 1043 aa28.36■■■□□ 2.13
CCDC189-207ENST00000544487 LRPPRCP42704 1394 aaKnown RBP28.35■■■□□ 2.13
CCDC189-207ENST00000544487 SENP3-EIF4A1A0A087X0R7 540 aa28.34■■■□□ 2.13
CCDC189-207ENST00000544487 CAMSAP1Q5T5Y3 1602 aa28.34■■■□□ 2.13
CCDC189-207ENST00000544487 GLI2P10070 1586 aa28.33■■■□□ 2.13
CCDC189-207ENST00000544487 NOS1P29475 1434 aa28.32■■■□□ 2.12
CCDC189-207ENST00000544487 NRXN1Q9ULB1 1477 aa28.32■■■□□ 2.12
CCDC189-207ENST00000544487 YEATS2Q9ULM3 1422 aa28.31■■■□□ 2.12
CCDC189-207ENST00000544487 CDCA8Q53HL2 280 aa28.3■■■□□ 2.12
CCDC189-207ENST00000544487 SIGLEC1Q9BZZ2 1709 aa28.29■■■□□ 2.12
CCDC189-207ENST00000544487 FAM69CQ0P6D2 419 aa28.27■■■□□ 2.12
CCDC189-207ENST00000544487 SMG6Q86US8 1419 aaKnown RBP28.26■■■□□ 2.12
CCDC189-207ENST00000544487 SYNMO15061 1565 aa28.26■■■□□ 2.12
CCDC189-207ENST00000544487 PPLO60437 1756 aa28.26■■■□□ 2.11
CCDC189-207ENST00000544487 MYOM1P52179 1685 aa28.23■■■□□ 2.11
CCDC189-207ENST00000544487 DIP2BQ9P265 1576 aa28.23■■■□□ 2.11
CCDC189-207ENST00000544487 KNSTRNQ9Y448 316 aa28.22■■■□□ 2.11
CCDC189-207ENST00000544487 KDM5AP29375 1690 aaKnown RBP28.22■■■□□ 2.11
CCDC189-207ENST00000544487 TSHZ2Q9NRE2 1034 aa28.21■■■□□ 2.11
CCDC189-207ENST00000544487 PIK3C2GO75747 1445 aa28.21■■■□□ 2.11
CCDC189-207ENST00000544487 NUDCQ9Y266 331 aa28.21■■■□□ 2.11
CCDC189-207ENST00000544487 ZC3H13Q5T200 1668 aaKnown RBP28.2■■■□□ 2.1
CCDC189-207ENST00000544487 PIK3C2BO00750 1634 aa28.19■■■□□ 2.1
CCDC189-207ENST00000544487 ERVK-7P63135 1459 aa28.19■■■□□ 2.1
CCDC189-207ENST00000544487 SETBP1Q9Y6X0 1596 aa28.19■■■□□ 2.1
CCDC189-207ENST00000544487 TSPOAP1O95153 1857 aa28.17■■■□□ 2.1
CCDC189-207ENST00000544487 RPGRIP1LQ68CZ1 1315 aa28.17■■■□□ 2.1
CCDC189-207ENST00000544487 ARHGAP31Q2M1Z3 1444 aa28.17■■■□□ 2.1
CCDC189-207ENST00000544487 MYO3AQ8NEV4 1616 aa28.16■■■□□ 2.1
CCDC189-207ENST00000544487 AMER1Q5JTC6 1135 aaPredicted RBP28.16■■■□□ 2.1
CCDC189-207ENST00000544487 C14orf93Q9H972 538 aaKnown RBP28.16■■■□□ 2.1
CCDC189-207ENST00000544487 ZMYM4Q5VZL5 1548 aa28.15■■■□□ 2.1
CCDC189-207ENST00000544487 ERICH6BQ5W0A0 696 aa28.15■■■□□ 2.1
CCDC189-207ENST00000544487 SLC24A1O60721 1099 aa28.15■■■□□ 2.1
CCDC189-207ENST00000544487 ASXL1Q8IXJ9 1541 aa28.13■■■□□ 2.09
CCDC189-207ENST00000544487 NUTM2DQ5VT03 806 aaPredicted RBP28.12■■■□□ 2.09
CCDC189-207ENST00000544487 TRAK1Q9UPV9 953 aa28.12■■■□□ 2.09
CCDC189-207ENST00000544487 ADGRB1O14514 1584 aa28.12■■■□□ 2.09
CCDC189-207ENST00000544487 TMEM132EQ6IEE7 984 aa28.11■■■□□ 2.09
CCDC189-207ENST00000544487 CENPJQ9HC77 1338 aaPredicted RBP28.11■■■□□ 2.09
CCDC189-207ENST00000544487 IDI1Q13907 227 aa28.09■■■□□ 2.09
CCDC189-207ENST00000544487 SALL2Q9Y467 1007 aaPredicted RBP28.09■■■□□ 2.09
CCDC189-207ENST00000544487 SBNO2Q9Y2G9 1366 aa28.09■■■□□ 2.09
CCDC189-207ENST00000544487 NEXMIFQ5QGS0 1516 aa28.09■■■□□ 2.09
CCDC189-207ENST00000544487 PPP2R1AP30153 589 aa28.08■■■□□ 2.09
CCDC189-207ENST00000544487 PPP4R2Q9NY27 417 aa28.07■■■□□ 2.08
CCDC189-207ENST00000544487 VGFO15240 615 aaPredicted RBP28.06■■■□□ 2.08
CCDC189-207ENST00000544487 PREX1Q8TCU6 1659 aa28.05■■■□□ 2.08
CCDC189-207ENST00000544487 QRICH2Q9H0J4 1663 aa28.05■■■□□ 2.08
CCDC189-207ENST00000544487 BLMP54132 1417 aaPredicted RBP28.04■■■□□ 2.08
CCDC189-207ENST00000544487 SLC52A1Q9NWF4 448 aa28.04■■■□□ 2.08
CCDC189-207ENST00000544487 NPC1L1Q9UHC9 1359 aa28.03■■■□□ 2.08
CCDC189-207ENST00000544487 INSRP06213 1382 aa28.02■■■□□ 2.08
CCDC189-207ENST00000544487 RNF123Q5XPI4 1314 aa28.02■■■□□ 2.08
CCDC189-207ENST00000544487 CARD14Q9BXL6 1004 aa28■■■□□ 2.07
CCDC189-207ENST00000544487 MYO5BQ9ULV0 1848 aa28■■■□□ 2.07
CCDC189-207ENST00000544487 FBXO31Q5XUX0 539 aaPredicted RBP27.98■■■□□ 2.07
CCDC189-207ENST00000544487 ADAMTS8Q9UP79 889 aa27.98■■■□□ 2.07
CCDC189-207ENST00000544487 TMEM131LA2VDJ0 1609 aa27.97■■■□□ 2.07
CCDC189-207ENST00000544487 SENP3Q9H4L4 574 aaPredicted RBP27.96■■■□□ 2.07
CCDC189-207ENST00000544487 PDE3BQ13370 1112 aa27.95■■■□□ 2.07
CCDC189-207ENST00000544487 REREQ9P2R6 1566 aa27.95■■■□□ 2.06
CCDC189-207ENST00000544487 B4GALNT3Q6L9W6 998 aa27.94■■■□□ 2.06
CCDC189-207ENST00000544487 WDR43Q15061 677 aaKnown RBP eCLIP27.94■■■□□ 2.06
CCDC189-207ENST00000544487 ARHGEF28Q8N1W1 1705 aaKnown RBP27.93■■■□□ 2.06
CCDC189-207ENST00000544487 ZFYVE9O95405 1425 aa27.93■■■□□ 2.06
CCDC189-207ENST00000544487 CDCA7LQ96GN5 454 aa27.92■■■□□ 2.06
CCDC189-207ENST00000544487 AGLP35573 1532 aa27.92■■■□□ 2.06
CCDC189-207ENST00000544487 SLC12A5Q9H2X9 1139 aa27.9■■■□□ 2.06
CCDC189-207ENST00000544487 KIF13AQ9H1H9 1805 aa27.88■■■□□ 2.05
CCDC189-207ENST00000544487 CLTCQ00610 1675 aaKnown RBP27.88■■■□□ 2.05
CCDC189-207ENST00000544487 NSD3Q9BZ95 1437 aa27.86■■■□□ 2.05
CCDC189-207ENST00000544487 RCAN3Q9UKA8 241 aa27.86■■■□□ 2.05
CCDC189-207ENST00000544487 MLECQ14165 292 aa27.85■■■□□ 2.05
CCDC189-207ENST00000544487 TULP4Q9NRJ4 1543 aa27.85■■■□□ 2.05
CCDC189-207ENST00000544487 STK26Q9P289 416 aa27.85■■■□□ 2.05
CCDC189-207ENST00000544487 PPP6R1Q9UPN7 881 aa27.85■■■□□ 2.05
CCDC189-207ENST00000544487 EVC2Q86UK5 1308 aa27.84■■■□□ 2.05
CCDC189-207ENST00000544487 SAFB2Q14151 953 aaKnown RBP eCLIP27.84■■■□□ 2.05
CCDC189-207ENST00000544487 STAG3Q9UJ98 1225 aa27.82■■■□□ 2.04
CCDC189-207ENST00000544487 RRP1P56182 461 aaKnown RBP27.81■■■□□ 2.04
CCDC189-207ENST00000544487 ARHGEF40Q8TER5 1519 aa27.8■■■□□ 2.04
CCDC189-207ENST00000544487 PLEKHH1Q9ULM0 1364 aa27.78■■■□□ 2.04
CCDC189-207ENST00000544487 CABP2Q9NPB3 220 aa27.78■■■□□ 2.04
CCDC189-207ENST00000544487 RBM19Q9Y4C8 960 aaKnown RBP27.78■■■□□ 2.04
CCDC189-207ENST00000544487 PUS7Q96PZ0 661 aaKnown RBP27.77■■■□□ 2.04
CCDC189-207ENST00000544487 SPATA31D1Q6ZQQ2 1576 aa27.76■■■□□ 2.03
CCDC189-207ENST00000544487 MORC1Q86VD1 984 aa27.76■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms