RNA–Protein interactions for RNA: ENST00000544316.1

COPS7A-219, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-219ENST00000544316 SLC26A8Q96RN1 970 aa16.04■□□□□ 0.16
COPS7A-219ENST00000544316 PPP1R15AO75807 674 aaPredicted RBP16.02■□□□□ 0.16
COPS7A-219ENST00000544316 MSH6P52701 1360 aa16.01■□□□□ 0.15
COPS7A-219ENST00000544316 ROCK1Q13464 1354 aa16.01■□□□□ 0.15
COPS7A-219ENST00000544316 PLEKHG1Q9ULL1 1385 aa16.01■□□□□ 0.15
COPS7A-219ENST00000544316 GCC2Q8IWJ2 1684 aa16■□□□□ 0.15
COPS7A-219ENST00000544316 TBX22Q9Y458 520 aa16■□□□□ 0.15
COPS7A-219ENST00000544316 NCOA3Q9Y6Q9 1424 aa16■□□□□ 0.15
COPS7A-219ENST00000544316 SENP3Q9H4L4 574 aaPredicted RBP15.99■□□□□ 0.15
COPS7A-219ENST00000544316 NWD1Q149M9 1564 aa15.99■□□□□ 0.15
COPS7A-219ENST00000544316 ZFYVE9O95405 1425 aa15.97■□□□□ 0.15
COPS7A-219ENST00000544316 RIMS2Q9UQ26 1411 aa15.97■□□□□ 0.15
COPS7A-219ENST00000544316 SLAIN2Q9P270 581 aa15.97■□□□□ 0.15
COPS7A-219ENST00000544316 UNC13BO14795 1591 aa15.96■□□□□ 0.15
COPS7A-219ENST00000544316 PIK3R4Q99570 1358 aa15.96■□□□□ 0.15
COPS7A-219ENST00000544316 CHD2O14647 1828 aaKnown RBP15.96■□□□□ 0.14
COPS7A-219ENST00000544316 TMEM131LA2VDJ0 1609 aa15.95■□□□□ 0.14
COPS7A-219ENST00000544316 CHGAP10645 457 aaKnown RBP15.94■□□□□ 0.14
COPS7A-219ENST00000544316 ROBO1Q9Y6N7 1651 aa15.94■□□□□ 0.14
COPS7A-219ENST00000544316 MYO5BQ9ULV0 1848 aa15.93■□□□□ 0.14
COPS7A-219ENST00000544316 DIP2AQ14689 1571 aa15.92■□□□□ 0.14
COPS7A-219ENST00000544316 CADPS2Q86UW7 1296 aa15.92■□□□□ 0.14
COPS7A-219ENST00000544316 IQGAP3Q86VI3 1631 aa15.92■□□□□ 0.14
COPS7A-219ENST00000544316 NUP155O75694 1391 aa15.91■□□□□ 0.14
COPS7A-219ENST00000544316 C14orf37Q86TY3 774 aa15.91■□□□□ 0.14
COPS7A-219ENST00000544316 C19orf44Q9H6X5 657 aa15.91■□□□□ 0.14
COPS7A-219ENST00000544316 E9PCH4 1651 aa15.9■□□□□ 0.14
COPS7A-219ENST00000544316 JCADQ9P266 1359 aa15.89■□□□□ 0.13
COPS7A-219ENST00000544316 ATF3P18847 181 aa15.89■□□□□ 0.13
COPS7A-219ENST00000544316 RBM33Q96EV2 1170 aaKnown RBP15.89■□□□□ 0.13
COPS7A-219ENST00000544316 RGS17Q9UGC6 210 aaPredicted RBP15.89■□□□□ 0.13
COPS7A-219ENST00000544316 PHLPP1O60346 1717 aa15.87■□□□□ 0.13
COPS7A-219ENST00000544316 TRPM2O94759 1503 aa15.86■□□□□ 0.13
COPS7A-219ENST00000544316 SPATA31A6Q5VVP1 1343 aa15.86■□□□□ 0.13
COPS7A-219ENST00000544316 ADAMTS13Q76LX8 1427 aa15.85■□□□□ 0.13
COPS7A-219ENST00000544316 AMOTL2Q9Y2J4 779 aa15.84■□□□□ 0.13
COPS7A-219ENST00000544316 ITGAEP38570 1179 aa15.83■□□□□ 0.12
COPS7A-219ENST00000544316 DCCP43146 1447 aa15.82■□□□□ 0.12
COPS7A-219ENST00000544316 ZNF326Q5BKZ1 582 aaKnown RBP15.81■□□□□ 0.12
COPS7A-219ENST00000544316 NUTM2DQ5VT03 806 aaPredicted RBP15.81■□□□□ 0.12
COPS7A-219ENST00000544316 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.81■□□□□ 0.12
COPS7A-219ENST00000544316 ZNF772Q68DY9 489 aaPredicted RBP15.8■□□□□ 0.12
COPS7A-219ENST00000544316 POTEAQ6S8J7 498 aa15.8■□□□□ 0.12
COPS7A-219ENST00000544316 SPHKAPQ2M3C7 1700 aa15.8■□□□□ 0.12
COPS7A-219ENST00000544316 AHDC1Q5TGY3 1603 aaPredicted RBP15.79■□□□□ 0.12
COPS7A-219ENST00000544316 SETBP1Q9Y6X0 1596 aa15.79■□□□□ 0.12
COPS7A-219ENST00000544316 MEX3CQ5U5Q3 659 aaKnown RBP15.78■□□□□ 0.12
COPS7A-219ENST00000544316 COL16A1Q07092 1604 aaPredicted RBP15.78■□□□□ 0.12
COPS7A-219ENST00000544316 VGFO15240 615 aaPredicted RBP15.75■□□□□ 0.11
COPS7A-219ENST00000544316 BRINP3Q76B58 766 aa15.75■□□□□ 0.11
COPS7A-219ENST00000544316 SHPRHQ149N8 1683 aa15.75■□□□□ 0.11
COPS7A-219ENST00000544316 KIF1BO60333 1816 aa15.74■□□□□ 0.11
COPS7A-219ENST00000544316 LRRC59Q96AG4 307 aaKnown RBP15.74■□□□□ 0.11
COPS7A-219ENST00000544316 PTPRUQ92729 1446 aa15.74■□□□□ 0.11
COPS7A-219ENST00000544316 RRBP1Q9P2E9 1410 aaKnown RBP15.73■□□□□ 0.11
COPS7A-219ENST00000544316 XRN1Q8IZH2 1706 aaKnown RBP15.73■□□□□ 0.11
COPS7A-219ENST00000544316 RPGRIP1LQ68CZ1 1315 aa15.72■□□□□ 0.11
COPS7A-219ENST00000544316 NRXN3Q9Y4C0 1643 aa15.72■□□□□ 0.11
COPS7A-219ENST00000544316 SETD5Q9C0A6 1442 aa15.7■□□□□ 0.1
COPS7A-219ENST00000544316 METP08581 1390 aa15.7■□□□□ 0.1
COPS7A-219ENST00000544316 NAIPQ13075 1403 aa15.69■□□□□ 0.1
COPS7A-219ENST00000544316 ADGRL3Q9HAR2 1447 aa15.69■□□□□ 0.1
COPS7A-219ENST00000544316 RXRBP28702 533 aa15.69■□□□□ 0.1
COPS7A-219ENST00000544316 PPARGC1BQ86YN6 1023 aaKnown RBP15.69■□□□□ 0.1
COPS7A-219ENST00000544316 MST1RQ04912 1400 aa15.68■□□□□ 0.1
COPS7A-219ENST00000544316 NEXMIFQ5QGS0 1516 aa15.68■□□□□ 0.1
COPS7A-219ENST00000544316 ASXL1Q8IXJ9 1541 aa15.68■□□□□ 0.1
COPS7A-219ENST00000544316 TRIM52Q96A61 297 aa15.68■□□□□ 0.1
COPS7A-219ENST00000544316 ACIN1Q9UKV3 1341 aaKnown RBP15.68■□□□□ 0.1
COPS7A-219ENST00000544316 LRP6O75581 1613 aa15.67■□□□□ 0.1
COPS7A-219ENST00000544316 CLTCL1P53675 1640 aa15.67■□□□□ 0.1
COPS7A-219ENST00000544316 SLC4A1APQ9BWU0 796 aaKnown RBP15.66■□□□□ 0.1
COPS7A-219ENST00000544316 HFM1A2PYH4 1435 aa15.66■□□□□ 0.1
COPS7A-219ENST00000544316 CDK12Q9NYV4 1490 aaPredicted RBP15.65■□□□□ 0.1
COPS7A-219ENST00000544316 NHSL1Q5SYE7 1610 aa15.65■□□□□ 0.1
COPS7A-219ENST00000544316 NUTM2BA6NNL0 878 aaPredicted RBP15.65■□□□□ 0.1
COPS7A-219ENST00000544316 NUTM2EB1AL46 878 aaPredicted RBP15.65■□□□□ 0.1
COPS7A-219ENST00000544316 NUTM2AQ8IVF1 878 aaPredicted RBP15.65■□□□□ 0.1
COPS7A-219ENST00000544316 PTCH1Q13635 1447 aa15.65■□□□□ 0.1
COPS7A-219ENST00000544316 PRAG1Q86YV5 1406 aa15.63■□□□□ 0.09
COPS7A-219ENST00000544316 SETD1AO15047 1707 aaKnown RBP15.63■□□□□ 0.09
COPS7A-219ENST00000544316 AFF2P51816 1311 aa15.61■□□□□ 0.09
COPS7A-219ENST00000544316 C1orf167Q5SNV9 1468 aa15.6■□□□□ 0.09
COPS7A-219ENST00000544316 NALCNQ8IZF0 1738 aa15.6■□□□□ 0.09
COPS7A-219ENST00000544316 LAMC1P11047 1609 aa15.59■□□□□ 0.09
COPS7A-219ENST00000544316 RBM6P78332 1123 aaKnown RBP15.59■□□□□ 0.09
COPS7A-219ENST00000544316 UPF1Q92900 1129 aaKnown RBP eCLIP15.59■□□□□ 0.09
COPS7A-219ENST00000544316 NGLY1Q96IV0 654 aa15.59■□□□□ 0.09
COPS7A-219ENST00000544316 PNPLA6Q8IY17 1366 aa15.59■□□□□ 0.09
COPS7A-219ENST00000544316 QTRT2Q9H974 415 aaKnown RBP15.58■□□□□ 0.08
COPS7A-219ENST00000544316 SOS2Q07890 1332 aaPredicted RBP15.58■□□□□ 0.08
COPS7A-219ENST00000544316 C8orf37Q96NL8 207 aa15.57■□□□□ 0.08
COPS7A-219ENST00000544316 ROBO2Q9HCK4 1378 aa15.57■□□□□ 0.08
COPS7A-219ENST00000544316 PPLO60437 1756 aa15.57■□□□□ 0.08
COPS7A-219ENST00000544316 LRPPRCP42704 1394 aaKnown RBP15.56■□□□□ 0.08
COPS7A-219ENST00000544316 ANKRD30BQ9BXX2 1392 aa15.56■□□□□ 0.08
COPS7A-219ENST00000544316 CCDC144AA2RUR9 1427 aa15.56■□□□□ 0.08
COPS7A-219ENST00000544316 NPHP3Q7Z494 1330 aa15.55■□□□□ 0.08
COPS7A-219ENST00000544316 FOXD1Q16676 465 aa15.54■□□□□ 0.08
COPS7A-219ENST00000544316 ORAI2Q96SN7 254 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms