RNA–Protein interactions for RNA: ENST00000544241.6

TCF4-209, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 2,264 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-209ENST00000544241 PLEKHH1Q9ULM0 1364 aa13.09□□□□□ -0.31
TCF4-209ENST00000544241 SCAPERQ9BY12 1400 aa13.08□□□□□ -0.32
TCF4-209ENST00000544241 MSNP26038 577 aaKnown RBP13.08□□□□□ -0.32
TCF4-209ENST00000544241 IGHDP01880 384 aa13.08□□□□□ -0.32
TCF4-209ENST00000544241 ZSCAN30Q86W11 494 aa13.08□□□□□ -0.32
TCF4-209ENST00000544241 CDK13Q14004 1512 aaKnown RBP13.07□□□□□ -0.32
TCF4-209ENST00000544241 HSCBQ8IWL3 235 aa13.07□□□□□ -0.32
TCF4-209ENST00000544241 KDM2AQ9Y2K7 1162 aa13.07□□□□□ -0.32
TCF4-209ENST00000544241 CAMSAP2Q08AD1 1489 aa13.07□□□□□ -0.32
TCF4-209ENST00000544241 OFD1O75665 1012 aa13.06□□□□□ -0.32
TCF4-209ENST00000544241 CANXP27824 592 aaKnown RBP13.06□□□□□ -0.32
TCF4-209ENST00000544241 TMF1P82094 1093 aa13.06□□□□□ -0.32
TCF4-209ENST00000544241 ERBB4Q15303 1308 aa13.06□□□□□ -0.32
TCF4-209ENST00000544241 PBRM1Q86U86 1689 aa13.06□□□□□ -0.32
TCF4-209ENST00000544241 PANK3Q9H999 370 aa13.06□□□□□ -0.32
TCF4-209ENST00000544241 ANKRD50Q9ULJ7 1429 aa13.06□□□□□ -0.32
TCF4-209ENST00000544241 CIZ1Q9ULV3 898 aaPredicted RBP13.05□□□□□ -0.32
TCF4-209ENST00000544241 LAMC1P11047 1609 aa13.05□□□□□ -0.32
TCF4-209ENST00000544241 GPRASP1Q5JY77 1395 aa13.05□□□□□ -0.32
TCF4-209ENST00000544241 NCLP19338 710 aaKnown RBP13.05□□□□□ -0.32
TCF4-209ENST00000544241 HS1BP3Q53T59 392 aa13.05□□□□□ -0.32
TCF4-209ENST00000544241 PRDM4Q9UKN5 801 aa13.05□□□□□ -0.32
TCF4-209ENST00000544241 SMAP1Q8IYB5 467 aaPredicted RBP13.04□□□□□ -0.32
TCF4-209ENST00000544241 CEP170Q5SW79 1584 aa13.04□□□□□ -0.32
TCF4-209ENST00000544241 NUP155O75694 1391 aa13.04□□□□□ -0.32
TCF4-209ENST00000544241 PPP1R9BQ96SB3 815 aa13.04□□□□□ -0.32
TCF4-209ENST00000544241 KDM5DQ9BY66 1539 aa13.04□□□□□ -0.32
TCF4-209ENST00000544241 ITSN2Q9NZM3 1697 aa13.03□□□□□ -0.32
TCF4-209ENST00000544241 C22orf23Q9BZE7 217 aa13.03□□□□□ -0.32
TCF4-209ENST00000544241 KNSTRNQ9Y448 316 aa13.03□□□□□ -0.32
TCF4-209ENST00000544241 PRAG1Q86YV5 1406 aa13.03□□□□□ -0.32
TCF4-209ENST00000544241 TRPM1Q7Z4N2 1603 aa13.02□□□□□ -0.32
TCF4-209ENST00000544241 RWDD1Q9H446 243 aaPredicted RBP13.02□□□□□ -0.32
TCF4-209ENST00000544241 CFDP1Q9UEE9 299 aaPredicted RBP13.02□□□□□ -0.33
TCF4-209ENST00000544241 ZNF644Q9H582 1327 aaPredicted RBP13.02□□□□□ -0.33
TCF4-209ENST00000544241 PLXNC1O60486 1568 aa13.02□□□□□ -0.33
TCF4-209ENST00000544241 GOLGA6L22H0YM25 854 aa13.01□□□□□ -0.33
TCF4-209ENST00000544241 RBM10P98175 930 aaKnown RBP13.01□□□□□ -0.33
TCF4-209ENST00000544241 IBTKQ9P2D0 1353 aaPredicted RBP13.01□□□□□ -0.33
TCF4-209ENST00000544241 PIK3C2GO75747 1445 aa13.01□□□□□ -0.33
TCF4-209ENST00000544241 ERBINQ96RT1 1412 aa13.01□□□□□ -0.33
TCF4-209ENST00000544241 PPP2R1AP30153 589 aa13.01□□□□□ -0.33
TCF4-209ENST00000544241 ABCC2Q92887 1545 aa13.01□□□□□ -0.33
TCF4-209ENST00000544241 IQGAP2Q13576 1575 aa13.01□□□□□ -0.33
TCF4-209ENST00000544241 CROCC2H7BZ55 1655 aa13□□□□□ -0.33
TCF4-209ENST00000544241 BCAR3O75815 825 aa13□□□□□ -0.33
TCF4-209ENST00000544241 NASPP49321 788 aaPredicted RBP13□□□□□ -0.33
TCF4-209ENST00000544241 CSPP1Q1MSJ5 1256 aa13□□□□□ -0.33
TCF4-209ENST00000544241 PLEKHG5O94827 1062 aa13□□□□□ -0.33
TCF4-209ENST00000544241 PRDM15P57071 1507 aaPredicted RBP12.99□□□□□ -0.33
TCF4-209ENST00000544241 FBLN2P98095 1184 aa12.99□□□□□ -0.33
TCF4-209ENST00000544241 CDCA8Q53HL2 280 aa12.99□□□□□ -0.33
TCF4-209ENST00000544241 SPRYD3Q8NCJ5 442 aa12.99□□□□□ -0.33
TCF4-209ENST00000544241 TESK2Q96S53 571 aa12.99□□□□□ -0.33
TCF4-209ENST00000544241 EIF2AK4Q9P2K8 1649 aaKnown RBP12.99□□□□□ -0.33
TCF4-209ENST00000544241 ADAMTS12P58397 1594 aa12.98□□□□□ -0.33
TCF4-209ENST00000544241 NCOA3Q9Y6Q9 1424 aa12.98□□□□□ -0.33
TCF4-209ENST00000544241 DYNC1I1O14576 645 aa12.98□□□□□ -0.33
TCF4-209ENST00000544241 SNX21Q969T3 373 aa12.98□□□□□ -0.33
TCF4-209ENST00000544241 COG6Q9Y2V7 657 aa12.98□□□□□ -0.33
TCF4-209ENST00000544241 MAGI1Q96QZ7 1491 aaPredicted RBP12.98□□□□□ -0.33
TCF4-209ENST00000544241 DISP3Q9P2K9 1392 aa12.98□□□□□ -0.33
TCF4-209ENST00000544241 CHMP7Q8WUX9 453 aaPredicted RBP12.97□□□□□ -0.33
TCF4-209ENST00000544241 SHANK2Q9UPX8 1470 aa12.97□□□□□ -0.33
TCF4-209ENST00000544241 TNNT2P45379 298 aaPredicted RBP12.97□□□□□ -0.33
TCF4-209ENST00000544241 FAM13BQ9NYF5 915 aa12.97□□□□□ -0.33
TCF4-209ENST00000544241 MCM5P33992 734 aa12.96□□□□□ -0.33
TCF4-209ENST00000544241 SMC5Q8IY18 1101 aa12.96□□□□□ -0.33
TCF4-209ENST00000544241 PDZRN3Q9UPQ7 1066 aa12.96□□□□□ -0.33
TCF4-209ENST00000544241 NPC1L1Q9UHC9 1359 aa12.96□□□□□ -0.33
TCF4-209ENST00000544241 PTPRGP23470 1445 aa12.96□□□□□ -0.34
TCF4-209ENST00000544241 NUP160Q12769 1436 aa12.96□□□□□ -0.34
TCF4-209ENST00000544241 UTP14CQ5TAP6 766 aaKnown RBP12.96□□□□□ -0.34
TCF4-209ENST00000544241 ZNF500O60304 480 aaPredicted RBP12.95□□□□□ -0.34
TCF4-209ENST00000544241 DDIT3P35638 169 aa12.95□□□□□ -0.34
TCF4-209ENST00000544241 RIPK4P57078 832 aa12.95□□□□□ -0.34
TCF4-209ENST00000544241 TNPO1Q92973 898 aaKnown RBP12.95□□□□□ -0.34
TCF4-209ENST00000544241 ZNF692Q9BU19 519 aaPredicted RBP12.95□□□□□ -0.34
TCF4-209ENST00000544241 TROQ12816 1431 aaPredicted RBP12.95□□□□□ -0.34
TCF4-209ENST00000544241 RAB3GAP1Q15042 981 aa12.95□□□□□ -0.34
TCF4-209ENST00000544241 SYNJ2O15056 1496 aa12.94□□□□□ -0.34
TCF4-209ENST00000544241 GAS2L3Q86XJ1 694 aa12.94□□□□□ -0.34
TCF4-209ENST00000544241 NOL7Q9UMY1 257 aaKnown RBP12.94□□□□□ -0.34
TCF4-209ENST00000544241 APAF1O14727 1248 aa12.93□□□□□ -0.34
TCF4-209ENST00000544241 MFAP1P55081 439 aaKnown RBP12.93□□□□□ -0.34
TCF4-209ENST00000544241 PANK1Q8TE04 598 aa12.93□□□□□ -0.34
TCF4-209ENST00000544241 HSP90AB1P08238 724 aaKnown RBP12.93□□□□□ -0.34
TCF4-209ENST00000544241 R3HCC1Q9Y3T6 440 aaKnown RBP12.93□□□□□ -0.34
TCF4-209ENST00000544241 GRIN2AQ12879 1464 aa12.93□□□□□ -0.34
TCF4-209ENST00000544241 SLC24A1O60721 1099 aa12.92□□□□□ -0.34
TCF4-209ENST00000544241 KLHL40Q2TBA0 621 aa12.92□□□□□ -0.34
TCF4-209ENST00000544241 GPATCH8Q9UKJ3 1502 aaKnown RBP12.92□□□□□ -0.34
TCF4-209ENST00000544241 ABCC10Q5T3U5 1492 aa12.92□□□□□ -0.34
TCF4-209ENST00000544241 ASXL1Q8IXJ9 1541 aa12.92□□□□□ -0.34
TCF4-209ENST00000544241 UQCRHLA0A096LP55 91 aa12.92□□□□□ -0.34
TCF4-209ENST00000544241 UQCRHP07919 91 aa12.92□□□□□ -0.34
TCF4-209ENST00000544241 RBM25P49756 843 aaKnown RBP12.92□□□□□ -0.34
TCF4-209ENST00000544241 FGD1P98174 961 aa12.92□□□□□ -0.34
TCF4-209ENST00000544241 AMER1Q5JTC6 1135 aaPredicted RBP12.92□□□□□ -0.34
TCF4-209ENST00000544241 RTEL1-TNFRSF6BF6WH68 1400 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms