RNA–Protein interactions for RNA: ENST00000544227.5

MMP16-204, Transcript of matrix metallopeptidase 16, humanhuman

TSL 1 (best)

Gene MMP16, Length 1,512 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP16-204ENST00000544227 GAPVD1Q14C86 1478 aa9.11□□□□□ -0.95
MMP16-204ENST00000544227 ANKK1Q8NFD2 765 aa9.1□□□□□ -0.95
MMP16-204ENST00000544227 PPP1R3GB7ZBB8 358 aa9.09□□□□□ -0.95
MMP16-204ENST00000544227 IGSF3O75054 1194 aa9.09□□□□□ -0.95
MMP16-204ENST00000544227 ABCA5Q8WWZ7 1642 aa9.09□□□□□ -0.96
MMP16-204ENST00000544227 ERCC6L2Q5T890 1561 aa9.08□□□□□ -0.96
MMP16-204ENST00000544227 ABCA10Q8WWZ4 1543 aa9.08□□□□□ -0.96
MMP16-204ENST00000544227 CCDC9Q9Y3X0 531 aaKnown RBP9.08□□□□□ -0.96
MMP16-204ENST00000544227 PROX2Q3B8N5 592 aa9.06□□□□□ -0.96
MMP16-204ENST00000544227 SPRYD3Q8NCJ5 442 aa9.06□□□□□ -0.96
MMP16-204ENST00000544227 RABGEF1Q9UJ41 708 aa9.06□□□□□ -0.96
MMP16-204ENST00000544227 PCDHGA10Q9Y5H3 936 aa9.05□□□□□ -0.96
MMP16-204ENST00000544227 GTPBP6O43824 516 aaPredicted RBP9.04□□□□□ -0.96
MMP16-204ENST00000544227 BCAMP50895 628 aa9.04□□□□□ -0.96
MMP16-204ENST00000544227 MFSD10Q14728 455 aa9.04□□□□□ -0.96
MMP16-204ENST00000544227 CHMP4AQ9BY43 222 aa9.04□□□□□ -0.96
MMP16-204ENST00000544227 CEP170Q5SW79 1584 aa9.04□□□□□ -0.96
MMP16-204ENST00000544227 GRIN2AQ12879 1464 aa9.03□□□□□ -0.96
MMP16-204ENST00000544227 TYW1BQ6NUM6 668 aa9.03□□□□□ -0.96
MMP16-204ENST00000544227 FBXW7Q969H0 707 aa9.03□□□□□ -0.96
MMP16-204ENST00000544227 EMILIN3Q9NT22 766 aa9.03□□□□□ -0.96
MMP16-204ENST00000544227 COL9A1P20849 921 aa9.02□□□□□ -0.97
MMP16-204ENST00000544227 CDK11BP21127 795 aaKnown RBP9.02□□□□□ -0.97
MMP16-204ENST00000544227 CDK11AQ9UQ88 783 aaPredicted RBP9.02□□□□□ -0.97
MMP16-204ENST00000544227 ADAMTS12P58397 1594 aa9.02□□□□□ -0.97
MMP16-204ENST00000544227 NUP160Q12769 1436 aa9.01□□□□□ -0.97
MMP16-204ENST00000544227 WRNQ14191 1432 aaPredicted RBP eCLIP9.01□□□□□ -0.97
MMP16-204ENST00000544227 PHF14O94880 888 aa9□□□□□ -0.97
MMP16-204ENST00000544227 BRPF1P55201 1214 aaPredicted RBP9□□□□□ -0.97
MMP16-204ENST00000544227 LAPTM4BQ86VI4 370 aa9□□□□□ -0.97
MMP16-204ENST00000544227 BIVM-ERCC5R4GMW8 1640 aa9□□□□□ -0.97
MMP16-204ENST00000544227 ITGBL1O95965 494 aaPredicted RBP9□□□□□ -0.97
MMP16-204ENST00000544227 TOP2BQ02880 1626 aa8.99□□□□□ -0.97
MMP16-204ENST00000544227 SHROOM2Q13796 1616 aa8.99□□□□□ -0.97
MMP16-204ENST00000544227 SOWAHBA6NEL2 793 aa8.99□□□□□ -0.97
MMP16-204ENST00000544227 ARID3AQ99856 593 aa8.99□□□□□ -0.97
MMP16-204ENST00000544227 KIAA1468Q9P260 1216 aa8.99□□□□□ -0.97
MMP16-204ENST00000544227 NYAP1Q6ZVC0 841 aa8.98□□□□□ -0.97
MMP16-204ENST00000544227 ZFRQ96KR1 1074 aaKnown RBP8.98□□□□□ -0.97
MMP16-204ENST00000544227 KIF13AQ9H1H9 1805 aa8.98□□□□□ -0.97
MMP16-204ENST00000544227 FHAD1B1AJZ9 1412 aa8.98□□□□□ -0.97
MMP16-204ENST00000544227 NECTIN2Q92692 538 aa8.97□□□□□ -0.97
MMP16-204ENST00000544227 SEPT9Q9UHD8 586 aaPredicted RBP8.97□□□□□ -0.97
MMP16-204ENST00000544227 PDIA4P13667 645 aaKnown RBP8.96□□□□□ -0.97
MMP16-204ENST00000544227 Q6ZNB5 142 aa8.96□□□□□ -0.97
MMP16-204ENST00000544227 ZBTB7CA1YPR0 619 aa8.95□□□□□ -0.98
MMP16-204ENST00000544227 ERICH3Q5RHP9 1530 aa8.95□□□□□ -0.98
MMP16-204ENST00000544227 EPAS1Q99814 870 aa8.95□□□□□ -0.98
MMP16-204ENST00000544227 PRG4Q92954 1404 aaPredicted RBP8.95□□□□□ -0.98
MMP16-204ENST00000544227 KCNC4Q03721 635 aa8.95□□□□□ -0.98
MMP16-204ENST00000544227 WBP1LQ9NX94 342 aa8.95□□□□□ -0.98
MMP16-204ENST00000544227 C6orf132Q5T0Z8 1188 aa8.94□□□□□ -0.98
MMP16-204ENST00000544227 RBM33Q96EV2 1170 aaKnown RBP8.94□□□□□ -0.98
MMP16-204ENST00000544227 ONECUT3O60422 494 aaPredicted RBP8.93□□□□□ -0.98
MMP16-204ENST00000544227 LRCH3Q96II8 777 aa8.93□□□□□ -0.98
MMP16-204ENST00000544227 TRIM6-TRIM34B2RNG4 842 aa8.92□□□□□ -0.98
MMP16-204ENST00000544227 DPYSL4O14531 572 aa8.92□□□□□ -0.98
MMP16-204ENST00000544227 HSP90B1P14625 803 aaKnown RBP8.92□□□□□ -0.98
MMP16-204ENST00000544227 FAM98CQ17RN3 349 aaKnown RBP8.92□□□□□ -0.98
MMP16-204ENST00000544227 CADPS2Q86UW7 1296 aa8.92□□□□□ -0.98
MMP16-204ENST00000544227 ZMYND15Q9H091 742 aa8.92□□□□□ -0.98
MMP16-204ENST00000544227 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.92□□□□□ -0.98
MMP16-204ENST00000544227 HMGB1P09429 215 aaKnown RBP8.91□□□□□ -0.98
MMP16-204ENST00000544227 HPS5Q9UPZ3 1129 aa8.91□□□□□ -0.98
MMP16-204ENST00000544227 C1orf115Q9H7X2 142 aa8.9□□□□□ -0.98
MMP16-204ENST00000544227 TSR3Q9UJK0 312 aaKnown RBP8.9□□□□□ -0.98
MMP16-204ENST00000544227 RUSC2Q8N2Y8 1516 aa8.89□□□□□ -0.99
MMP16-204ENST00000544227 FAM69CQ0P6D2 419 aa8.89□□□□□ -0.99
MMP16-204ENST00000544227 DDX12PQ92771 950 aa8.89□□□□□ -0.99
MMP16-204ENST00000544227 RSPH6AQ9H0K4 717 aa8.89□□□□□ -0.99
MMP16-204ENST00000544227 ADCY10Q96PN6 1610 aa8.88□□□□□ -0.99
MMP16-204ENST00000544227 ABCC10Q5T3U5 1492 aa8.87□□□□□ -0.99
MMP16-204ENST00000544227 CAMK2BQ13554 666 aa8.86□□□□□ -0.99
MMP16-204ENST00000544227 PACS2Q86VP3 889 aa8.86□□□□□ -0.99
MMP16-204ENST00000544227 MAP3K7O43318 606 aa8.85□□□□□ -0.99
MMP16-204ENST00000544227 PUS7Q96PZ0 661 aaKnown RBP8.85□□□□□ -0.99
MMP16-204ENST00000544227 IGF1RP08069 1367 aa8.85□□□□□ -0.99
MMP16-204ENST00000544227 DIP2BQ9P265 1576 aa8.85□□□□□ -0.99
MMP16-204ENST00000544227 TSPOAP1O95153 1857 aa8.85□□□□□ -0.99
MMP16-204ENST00000544227 MAPKBP1O60336 1514 aa8.85□□□□□ -0.99
MMP16-204ENST00000544227 PPP4CP60510 307 aa8.84□□□□□ -0.99
MMP16-204ENST00000544227 LAPTM4AQ15012 233 aa8.84□□□□□ -0.99
MMP16-204ENST00000544227 UBE2Q2Q8WVN8 375 aa8.83□□□□□ -1
MMP16-204ENST00000544227 KIAA0586Q9BVV6 1533 aa8.83□□□□□ -1
MMP16-204ENST00000544227 EN1Q05925 392 aaPredicted RBP8.82□□□□□ -1
MMP16-204ENST00000544227 TSR1Q2NL82 804 aaKnown RBP8.81□□□□□ -1
MMP16-204ENST00000544227 DHX37Q8IY37 1157 aaKnown RBP8.81□□□□□ -1
MMP16-204ENST00000544227 TSKSQ9UJT2 592 aa8.81□□□□□ -1
MMP16-204ENST00000544227 KIF27Q86VH2 1401 aa8.8□□□□□ -1
MMP16-204ENST00000544227 KDM6BO15054 1643 aa8.8□□□□□ -1
MMP16-204ENST00000544227 GFRA3O60609 400 aa8.8□□□□□ -1
MMP16-204ENST00000544227 NEUROD2Q15784 382 aa8.8□□□□□ -1
MMP16-204ENST00000544227 CUL7Q14999 1698 aa8.8□□□□□ -1
MMP16-204ENST00000544227 BRD2P25440 801 aaKnown RBP8.79□□□□□ -1
MMP16-204ENST00000544227 PTPRGP23470 1445 aa8.78□□□□□ -1
MMP16-204ENST00000544227 SMAPO00193 183 aa8.78□□□□□ -1
MMP16-204ENST00000544227 RNF40O75150 1001 aa8.78□□□□□ -1
MMP16-204ENST00000544227 SAMD7Q7Z3H4 446 aa8.78□□□□□ -1
MMP16-204ENST00000544227 CARMIL1Q5VZK9 1371 aa8.78□□□□□ -1
MMP16-204ENST00000544227 NBPF26B4DH59 902 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms