RNA–Protein interactions for RNA: ENST00000544140.5

MRPL48-213, Transcript of mitochondrial ribosomal protein L48, humanhuman

TSL 2

Gene MRPL48, Length 996 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL48-213ENST00000544140 ZFYVE9O95405 1425 aa18.79■□□□□ 0.6
MRPL48-213ENST00000544140 NKTRP30414 1462 aaKnown RBP18.78■□□□□ 0.6
MRPL48-213ENST00000544140 SLC26A8Q96RN1 970 aa18.76■□□□□ 0.59
MRPL48-213ENST00000544140 UNC13BO14795 1591 aa18.75■□□□□ 0.59
MRPL48-213ENST00000544140 PLEKHG1Q9ULL1 1385 aa18.74■□□□□ 0.59
MRPL48-213ENST00000544140 TMEM131LA2VDJ0 1609 aa18.74■□□□□ 0.59
MRPL48-213ENST00000544140 FAM50AQ14320 339 aaKnown RBP18.73■□□□□ 0.59
MRPL48-213ENST00000544140 RGS17Q9UGC6 210 aaPredicted RBP18.73■□□□□ 0.59
MRPL48-213ENST00000544140 GCC2Q8IWJ2 1684 aa18.73■□□□□ 0.59
MRPL48-213ENST00000544140 ROCK1Q13464 1354 aa18.72■□□□□ 0.59
MRPL48-213ENST00000544140 PROSER2Q86WR7 435 aaPredicted RBP18.72■□□□□ 0.59
MRPL48-213ENST00000544140 ROBO1Q9Y6N7 1651 aa18.7■□□□□ 0.58
MRPL48-213ENST00000544140 CHD2O14647 1828 aaKnown RBP18.7■□□□□ 0.58
MRPL48-213ENST00000544140 MYO5BQ9ULV0 1848 aa18.7■□□□□ 0.58
MRPL48-213ENST00000544140 RIMS2Q9UQ26 1411 aa18.69■□□□□ 0.58
MRPL48-213ENST00000544140 NCOA3Q9Y6Q9 1424 aa18.67■□□□□ 0.58
MRPL48-213ENST00000544140 E9PCH4 1651 aa18.67■□□□□ 0.58
MRPL48-213ENST00000544140 HDGFP51858 240 aaKnown RBP18.67■□□□□ 0.58
MRPL48-213ENST00000544140 TBX22Q9Y458 520 aa18.67■□□□□ 0.58
MRPL48-213ENST00000544140 IQGAP3Q86VI3 1631 aa18.67■□□□□ 0.58
MRPL48-213ENST00000544140 RBM33Q96EV2 1170 aaKnown RBP18.66■□□□□ 0.58
MRPL48-213ENST00000544140 MSH6P52701 1360 aa18.66■□□□□ 0.58
MRPL48-213ENST00000544140 ADAMTS13Q76LX8 1427 aa18.66■□□□□ 0.58
MRPL48-213ENST00000544140 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.64■□□□□ 0.57
MRPL48-213ENST00000544140 SLAIN2Q9P270 581 aa18.64■□□□□ 0.57
MRPL48-213ENST00000544140 PIK3R4Q99570 1358 aa18.63■□□□□ 0.57
MRPL48-213ENST00000544140 DIP2AQ14689 1571 aa18.63■□□□□ 0.57
MRPL48-213ENST00000544140 PPP1R15AO75807 674 aaPredicted RBP18.6■□□□□ 0.57
MRPL48-213ENST00000544140 BCANQ96GW7 911 aa18.6■□□□□ 0.57
MRPL48-213ENST00000544140 POTEAQ6S8J7 498 aa18.58■□□□□ 0.56
MRPL48-213ENST00000544140 NUP155O75694 1391 aa18.57■□□□□ 0.56
MRPL48-213ENST00000544140 JCADQ9P266 1359 aa18.57■□□□□ 0.56
MRPL48-213ENST00000544140 COL16A1Q07092 1604 aaPredicted RBP18.57■□□□□ 0.56
MRPL48-213ENST00000544140 PHLPP1O60346 1717 aa18.57■□□□□ 0.56
MRPL48-213ENST00000544140 C19orf44Q9H6X5 657 aa18.54■□□□□ 0.56
MRPL48-213ENST00000544140 PTPRUQ92729 1446 aa18.54■□□□□ 0.56
MRPL48-213ENST00000544140 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.54■□□□□ 0.56
MRPL48-213ENST00000544140 TRPM2O94759 1503 aa18.54■□□□□ 0.56
MRPL48-213ENST00000544140 AHDC1Q5TGY3 1603 aaPredicted RBP18.53■□□□□ 0.56
MRPL48-213ENST00000544140 CHGAP10645 457 aaKnown RBP18.53■□□□□ 0.56
MRPL48-213ENST00000544140 NRXN3Q9Y4C0 1643 aa18.52■□□□□ 0.56
MRPL48-213ENST00000544140 SETBP1Q9Y6X0 1596 aa18.52■□□□□ 0.56
MRPL48-213ENST00000544140 NUTM2DQ5VT03 806 aaPredicted RBP18.52■□□□□ 0.56
MRPL48-213ENST00000544140 CADPS2Q86UW7 1296 aa18.52■□□□□ 0.56
MRPL48-213ENST00000544140 DCCP43146 1447 aa18.5■□□□□ 0.55
MRPL48-213ENST00000544140 SPHKAPQ2M3C7 1700 aa18.5■□□□□ 0.55
MRPL48-213ENST00000544140 XRN1Q8IZH2 1706 aaKnown RBP18.5■□□□□ 0.55
MRPL48-213ENST00000544140 AMOTL2Q9Y2J4 779 aa18.5■□□□□ 0.55
MRPL48-213ENST00000544140 POTEDQ86YR6 584 aa18.49■□□□□ 0.55
MRPL48-213ENST00000544140 SPATA31A6Q5VVP1 1343 aa18.49■□□□□ 0.55
MRPL48-213ENST00000544140 LRP6O75581 1613 aa18.48■□□□□ 0.55
MRPL48-213ENST00000544140 SHPRHQ149N8 1683 aa18.47■□□□□ 0.55
MRPL48-213ENST00000544140 ATF3P18847 181 aa18.46■□□□□ 0.55
MRPL48-213ENST00000544140 C14orf37Q86TY3 774 aa18.45■□□□□ 0.54
MRPL48-213ENST00000544140 RRBP1Q9P2E9 1410 aaKnown RBP18.44■□□□□ 0.54
MRPL48-213ENST00000544140 ITGAEP38570 1179 aa18.44■□□□□ 0.54
MRPL48-213ENST00000544140 BRINP3Q76B58 766 aa18.44■□□□□ 0.54
MRPL48-213ENST00000544140 METP08581 1390 aa18.43■□□□□ 0.54
MRPL48-213ENST00000544140 NEXMIFQ5QGS0 1516 aa18.43■□□□□ 0.54
MRPL48-213ENST00000544140 MST1RQ04912 1400 aa18.42■□□□□ 0.54
MRPL48-213ENST00000544140 CLTCL1P53675 1640 aa18.41■□□□□ 0.54
MRPL48-213ENST00000544140 NAIPQ13075 1403 aa18.41■□□□□ 0.54
MRPL48-213ENST00000544140 SETD5Q9C0A6 1442 aa18.4■□□□□ 0.54
MRPL48-213ENST00000544140 ASXL1Q8IXJ9 1541 aa18.4■□□□□ 0.54
MRPL48-213ENST00000544140 NHSL1Q5SYE7 1610 aa18.39■□□□□ 0.53
MRPL48-213ENST00000544140 ADGRL3Q9HAR2 1447 aa18.39■□□□□ 0.53
MRPL48-213ENST00000544140 ZNF772Q68DY9 489 aaPredicted RBP18.38■□□□□ 0.53
MRPL48-213ENST00000544140 PRAG1Q86YV5 1406 aa18.38■□□□□ 0.53
MRPL48-213ENST00000544140 SETD1AO15047 1707 aaKnown RBP18.37■□□□□ 0.53
MRPL48-213ENST00000544140 PPARGC1BQ86YN6 1023 aaKnown RBP18.37■□□□□ 0.53
MRPL48-213ENST00000544140 MAPK8IP2Q13387 824 aaPredicted RBP18.36■□□□□ 0.53
MRPL48-213ENST00000544140 ZNF326Q5BKZ1 582 aaKnown RBP18.36■□□□□ 0.53
MRPL48-213ENST00000544140 PPP4R3CPQ6ZMV5 832 aa18.36■□□□□ 0.53
MRPL48-213ENST00000544140 KIF1BO60333 1816 aa18.35■□□□□ 0.53
MRPL48-213ENST00000544140 NALCNQ8IZF0 1738 aa18.35■□□□□ 0.53
MRPL48-213ENST00000544140 PTCH1Q13635 1447 aa18.34■□□□□ 0.53
MRPL48-213ENST00000544140 HFM1A2PYH4 1435 aa18.33■□□□□ 0.53
MRPL48-213ENST00000544140 LAMC1P11047 1609 aa18.33■□□□□ 0.52
MRPL48-213ENST00000544140 CDK12Q9NYV4 1490 aaPredicted RBP18.33■□□□□ 0.52
MRPL48-213ENST00000544140 LRRC59Q96AG4 307 aaKnown RBP18.32■□□□□ 0.52
MRPL48-213ENST00000544140 MEX3CQ5U5Q3 659 aaKnown RBP18.31■□□□□ 0.52
MRPL48-213ENST00000544140 VGFO15240 615 aaPredicted RBP18.3■□□□□ 0.52
MRPL48-213ENST00000544140 RPGRIP1LQ68CZ1 1315 aa18.29■□□□□ 0.52
MRPL48-213ENST00000544140 C1orf167Q5SNV9 1468 aa18.29■□□□□ 0.52
MRPL48-213ENST00000544140 PNPLA6Q8IY17 1366 aa18.29■□□□□ 0.52
MRPL48-213ENST00000544140 ROBO2Q9HCK4 1378 aa18.29■□□□□ 0.52
MRPL48-213ENST00000544140 UPF1Q92900 1129 aaKnown RBP eCLIP18.27■□□□□ 0.52
MRPL48-213ENST00000544140 RXRBP28702 533 aa18.26■□□□□ 0.51
MRPL48-213ENST00000544140 AFF2P51816 1311 aa18.25■□□□□ 0.51
MRPL48-213ENST00000544140 SOS2Q07890 1332 aaPredicted RBP18.25■□□□□ 0.51
MRPL48-213ENST00000544140 PPLO60437 1756 aa18.25■□□□□ 0.51
MRPL48-213ENST00000544140 NUTM2BA6NNL0 878 aaPredicted RBP18.25■□□□□ 0.51
MRPL48-213ENST00000544140 NUTM2EB1AL46 878 aaPredicted RBP18.25■□□□□ 0.51
MRPL48-213ENST00000544140 NUTM2AQ8IVF1 878 aaPredicted RBP18.25■□□□□ 0.51
MRPL48-213ENST00000544140 DDX17Q92841 729 aaKnown RBP18.25■□□□□ 0.51
MRPL48-213ENST00000544140 TRIM52Q96A61 297 aa18.23■□□□□ 0.51
MRPL48-213ENST00000544140 SLC4A1APQ9BWU0 796 aaKnown RBP18.22■□□□□ 0.51
MRPL48-213ENST00000544140 ORAI2Q96SN7 254 aa18.2■□□□□ 0.5
MRPL48-213ENST00000544140 SRCAPQ6ZRS2 3230 aa18.2■□□□□ 0.5
MRPL48-213ENST00000544140 TECPR2O15040 1411 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms