RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 XIRP1Q702N8 1843 aaKnown RBP34.9■■■■□ 3.18
CDKN3-207ENST00000543789 PPP1R15AO75807 674 aaPredicted RBP34.88■■■■□ 3.17
CDKN3-207ENST00000543789 RGS17Q9UGC6 210 aaPredicted RBP34.87■■■■□ 3.17
CDKN3-207ENST00000543789 PLEKHG1Q9ULL1 1385 aa34.85■■■■□ 3.17
CDKN3-207ENST00000543789 ZFYVE9O95405 1425 aa34.84■■■■□ 3.17
CDKN3-207ENST00000543789 NKTRP30414 1462 aaKnown RBP34.84■■■■□ 3.17
CDKN3-207ENST00000543789 RIMS2Q9UQ26 1411 aa34.83■■■■□ 3.17
CDKN3-207ENST00000543789 MSH6P52701 1360 aa34.83■■■■□ 3.17
CDKN3-207ENST00000543789 CHGAP10645 457 aaKnown RBP34.82■■■■□ 3.16
CDKN3-207ENST00000543789 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.81■■■■□ 3.16
CDKN3-207ENST00000543789 SLAIN2Q9P270 581 aa34.8■■■■□ 3.16
CDKN3-207ENST00000543789 TBX22Q9Y458 520 aa34.8■■■■□ 3.16
CDKN3-207ENST00000543789 ROCK1Q13464 1354 aa34.77■■■■□ 3.16
CDKN3-207ENST00000543789 NWD1Q149M9 1564 aa34.77■■■■□ 3.16
CDKN3-207ENST00000543789 NUTM2DQ5VT03 806 aaPredicted RBP34.72■■■■□ 3.15
CDKN3-207ENST00000543789 TMEM131LA2VDJ0 1609 aa34.7■■■■□ 3.15
CDKN3-207ENST00000543789 ROBO1Q9Y6N7 1651 aa34.7■■■■□ 3.15
CDKN3-207ENST00000543789 UNC13BO14795 1591 aa34.69■■■■□ 3.14
CDKN3-207ENST00000543789 NUP155O75694 1391 aa34.68■■■■□ 3.14
CDKN3-207ENST00000543789 ITGAEP38570 1179 aa34.68■■■■□ 3.14
CDKN3-207ENST00000543789 C14orf37Q86TY3 774 aa34.67■■■■□ 3.14
CDKN3-207ENST00000543789 NCOA3Q9Y6Q9 1424 aa34.66■■■■□ 3.14
CDKN3-207ENST00000543789 POTEAQ6S8J7 498 aa34.66■■■■□ 3.14
CDKN3-207ENST00000543789 GCC2Q8IWJ2 1684 aa34.64■■■■□ 3.14
CDKN3-207ENST00000543789 ADAMTS13Q76LX8 1427 aa34.64■■■■□ 3.14
CDKN3-207ENST00000543789 PIK3R4Q99570 1358 aa34.61■■■■□ 3.13
CDKN3-207ENST00000543789 JCADQ9P266 1359 aa34.61■■■■□ 3.13
CDKN3-207ENST00000543789 C19orf44Q9H6X5 657 aa34.6■■■■□ 3.13
CDKN3-207ENST00000543789 CADPS2Q86UW7 1296 aa34.59■■■■□ 3.13
CDKN3-207ENST00000543789 CHD2O14647 1828 aaKnown RBP34.59■■■■□ 3.13
CDKN3-207ENST00000543789 MYO5BQ9ULV0 1848 aa34.59■■■■□ 3.13
CDKN3-207ENST00000543789 E9PCH4 1651 aa34.59■■■■□ 3.13
CDKN3-207ENST00000543789 ATF3P18847 181 aa34.57■■■■□ 3.12
CDKN3-207ENST00000543789 IQGAP3Q86VI3 1631 aa34.56■■■■□ 3.12
CDKN3-207ENST00000543789 AMOTL2Q9Y2J4 779 aa34.56■■■■□ 3.12
CDKN3-207ENST00000543789 PPARGC1BQ86YN6 1023 aaKnown RBP34.55■■■■□ 3.12
CDKN3-207ENST00000543789 DIP2AQ14689 1571 aa34.51■■■■□ 3.12
CDKN3-207ENST00000543789 PHLPP1O60346 1717 aa34.48■■■■□ 3.11
CDKN3-207ENST00000543789 ZNF326Q5BKZ1 582 aaKnown RBP34.46■■■■□ 3.11
CDKN3-207ENST00000543789 PTPRUQ92729 1446 aa34.46■■■■□ 3.11
CDKN3-207ENST00000543789 SPATA31A6Q5VVP1 1343 aa34.45■■■■□ 3.11
CDKN3-207ENST00000543789 TRPM2O94759 1503 aa34.44■■■■□ 3.1
CDKN3-207ENST00000543789 BRINP3Q76B58 766 aa34.4■■■■□ 3.1
CDKN3-207ENST00000543789 COL16A1Q07092 1604 aaPredicted RBP34.4■■■■□ 3.1
CDKN3-207ENST00000543789 MEX3CQ5U5Q3 659 aaKnown RBP34.39■■■■□ 3.1
CDKN3-207ENST00000543789 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.38■■■■□ 3.09
CDKN3-207ENST00000543789 METP08581 1390 aa34.34■■■■□ 3.09
CDKN3-207ENST00000543789 ZNF772Q68DY9 489 aaPredicted RBP34.33■■■■□ 3.09
CDKN3-207ENST00000543789 AHDC1Q5TGY3 1603 aaPredicted RBP34.33■■■■□ 3.09
CDKN3-207ENST00000543789 DCCP43146 1447 aa34.32■■■■□ 3.08
CDKN3-207ENST00000543789 SETBP1Q9Y6X0 1596 aa34.32■■■■□ 3.08
CDKN3-207ENST00000543789 LRP6O75581 1613 aa34.31■■■■□ 3.08
CDKN3-207ENST00000543789 NRXN3Q9Y4C0 1643 aa34.26■■■■□ 3.07
CDKN3-207ENST00000543789 NUTM2BA6NNL0 878 aaPredicted RBP34.25■■■■□ 3.07
CDKN3-207ENST00000543789 NUTM2EB1AL46 878 aaPredicted RBP34.25■■■■□ 3.07
CDKN3-207ENST00000543789 NUTM2AQ8IVF1 878 aaPredicted RBP34.25■■■■□ 3.07
CDKN3-207ENST00000543789 SPHKAPQ2M3C7 1700 aa34.24■■■■□ 3.07
CDKN3-207ENST00000543789 MST1RQ04912 1400 aa34.23■■■■□ 3.07
CDKN3-207ENST00000543789 RRBP1Q9P2E9 1410 aaKnown RBP34.22■■■■□ 3.07
CDKN3-207ENST00000543789 NAIPQ13075 1403 aa34.21■■■■□ 3.07
CDKN3-207ENST00000543789 XRN1Q8IZH2 1706 aaKnown RBP34.21■■■■□ 3.07
CDKN3-207ENST00000543789 LRRC59Q96AG4 307 aaKnown RBP34.21■■■■□ 3.07
CDKN3-207ENST00000543789 ASXL1Q8IXJ9 1541 aa34.2■■■■□ 3.06
CDKN3-207ENST00000543789 VGFO15240 615 aaPredicted RBP34.19■■■■□ 3.06
CDKN3-207ENST00000543789 TRIM52Q96A61 297 aa34.19■■■■□ 3.06
CDKN3-207ENST00000543789 SETD5Q9C0A6 1442 aa34.19■■■■□ 3.06
CDKN3-207ENST00000543789 RXRBP28702 533 aa34.17■■■■□ 3.06
CDKN3-207ENST00000543789 SHPRHQ149N8 1683 aa34.17■■■■□ 3.06
CDKN3-207ENST00000543789 ADGRL3Q9HAR2 1447 aa34.17■■■■□ 3.06
CDKN3-207ENST00000543789 NEXMIFQ5QGS0 1516 aa34.16■■■■□ 3.06
CDKN3-207ENST00000543789 CLTCL1P53675 1640 aa34.15■■■■□ 3.06
CDKN3-207ENST00000543789 DDX17Q92841 729 aaKnown RBP34.14■■■■□ 3.06
CDKN3-207ENST00000543789 SLC4A1APQ9BWU0 796 aaKnown RBP34.11■■■■□ 3.05
CDKN3-207ENST00000543789 RPGRIP1LQ68CZ1 1315 aa34.1■■■■□ 3.05
CDKN3-207ENST00000543789 AFF2P51816 1311 aa34.09■■■■□ 3.05
CDKN3-207ENST00000543789 UPF1Q92900 1129 aaKnown RBP eCLIP34.09■■■■□ 3.05
CDKN3-207ENST00000543789 SETD1AO15047 1707 aaKnown RBP34.09■■■■□ 3.05
CDKN3-207ENST00000543789 HFM1A2PYH4 1435 aa34.04■■■■□ 3.04
CDKN3-207ENST00000543789 C1orf167Q5SNV9 1468 aa34.04■■■■□ 3.04
CDKN3-207ENST00000543789 PNPLA6Q8IY17 1366 aa34.04■■■■□ 3.04
CDKN3-207ENST00000543789 ROBO2Q9HCK4 1378 aa34.04■■■■□ 3.04
CDKN3-207ENST00000543789 C8orf37Q96NL8 207 aa34.04■■■■□ 3.04
CDKN3-207ENST00000543789 PTCH1Q13635 1447 aa34.03■■■■□ 3.04
CDKN3-207ENST00000543789 NHSL1Q5SYE7 1610 aa34.01■■■■□ 3.04
CDKN3-207ENST00000543789 ORAI2Q96SN7 254 aa34■■■■□ 3.03
CDKN3-207ENST00000543789 QTRT2Q9H974 415 aaKnown RBP34■■■■□ 3.03
CDKN3-207ENST00000543789 KIF1BO60333 1816 aa34■■■■□ 3.03
CDKN3-207ENST00000543789 CDK12Q9NYV4 1490 aaPredicted RBP33.98■■■■□ 3.03
CDKN3-207ENST00000543789 NALCNQ8IZF0 1738 aa33.96■■■■□ 3.03
CDKN3-207ENST00000543789 ADAMTS2O95450 1211 aa33.95■■■■□ 3.03
CDKN3-207ENST00000543789 NGLY1Q96IV0 654 aa33.95■■■■□ 3.03
CDKN3-207ENST00000543789 SOS2Q07890 1332 aaPredicted RBP33.95■■■■□ 3.03
CDKN3-207ENST00000543789 RBM6P78332 1123 aaKnown RBP33.94■■■■□ 3.02
CDKN3-207ENST00000543789 FOXD1Q16676 465 aa33.93■■■■□ 3.02
CDKN3-207ENST00000543789 PRAG1Q86YV5 1406 aa33.93■■■■□ 3.02
CDKN3-207ENST00000543789 RGL3Q3MIN7 710 aa33.86■■■■□ 3.01
CDKN3-207ENST00000543789 ADGRF5Q8IZF2 1346 aa33.85■■■■□ 3.01
CDKN3-207ENST00000543789 ESCO1Q5FWF5 840 aa33.85■■■■□ 3.01
CDKN3-207ENST00000543789 USP21Q9UK80 565 aa33.82■■■■□ 3
CDKN3-207ENST00000543789 CCDC144AA2RUR9 1427 aa33.81■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms