RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 HDGFP51858 240 aaKnown RBP17.07■□□□□ 0.32
DDB1-223ENST00000543658 THEMISQ8N1K5 641 aaPredicted RBP17.07■□□□□ 0.32
DDB1-223ENST00000543658 DCAF11Q8TEB1 546 aa17.07■□□□□ 0.32
DDB1-223ENST00000543658 L3MBTL2Q969R5 705 aa17.06■□□□□ 0.32
DDB1-223ENST00000543658 MYOM2P54296 1465 aa17.05■□□□□ 0.32
DDB1-223ENST00000543658 RIMS2Q9UQ26 1411 aa17.05■□□□□ 0.32
DDB1-223ENST00000543658 PPP1R15AO75807 674 aaPredicted RBP17.05■□□□□ 0.32
DDB1-223ENST00000543658 KDM2AQ9Y2K7 1162 aa17.05■□□□□ 0.32
DDB1-223ENST00000543658 SLIT1O75093 1534 aa17.05■□□□□ 0.32
DDB1-223ENST00000543658 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.04■□□□□ 0.32
DDB1-223ENST00000543658 STAC3Q96MF2 364 aa17.04■□□□□ 0.32
DDB1-223ENST00000543658 TMEM2Q9UHN6 1383 aa17.03■□□□□ 0.32
DDB1-223ENST00000543658 EID1Q9Y6B2 187 aa17.03■□□□□ 0.32
DDB1-223ENST00000543658 LAMC1P11047 1609 aa17.03■□□□□ 0.32
DDB1-223ENST00000543658 VGFO15240 615 aaPredicted RBP17.02■□□□□ 0.32
DDB1-223ENST00000543658 ARHGAP23Q9P227 1491 aa17.01■□□□□ 0.31
DDB1-223ENST00000543658 ZFYVE9O95405 1425 aa17■□□□□ 0.31
DDB1-223ENST00000543658 SENP3Q9H4L4 574 aaPredicted RBP17■□□□□ 0.31
DDB1-223ENST00000543658 KIAA1210Q9ULL0 1709 aa17■□□□□ 0.31
DDB1-223ENST00000543658 LMTK3Q96Q04 1460 aa16.99■□□□□ 0.31
DDB1-223ENST00000543658 SCAF11Q99590 1463 aaKnown RBP16.99■□□□□ 0.31
DDB1-223ENST00000543658 NUTM2DQ5VT03 806 aaPredicted RBP16.99■□□□□ 0.31
DDB1-223ENST00000543658 IQGAP1P46940 1657 aa16.99■□□□□ 0.31
DDB1-223ENST00000543658 TRPM1Q7Z4N2 1603 aa16.99■□□□□ 0.31
DDB1-223ENST00000543658 PRAG1Q86YV5 1406 aa16.97■□□□□ 0.31
DDB1-223ENST00000543658 TXNDC2Q86VQ3 553 aa16.97■□□□□ 0.31
DDB1-223ENST00000543658 BCANQ96GW7 911 aa16.97■□□□□ 0.31
DDB1-223ENST00000543658 ANKLE2Q86XL3 938 aa16.96■□□□□ 0.31
DDB1-223ENST00000543658 NRXN1Q9ULB1 1477 aa16.96■□□□□ 0.31
DDB1-223ENST00000543658 PIK3C2GO75747 1445 aa16.95■□□□□ 0.3
DDB1-223ENST00000543658 ADGRF5Q8IZF2 1346 aa16.95■□□□□ 0.3
DDB1-223ENST00000543658 DIP2AQ14689 1571 aa16.94■□□□□ 0.3
DDB1-223ENST00000543658 SETBP1Q9Y6X0 1596 aa16.94■□□□□ 0.3
DDB1-223ENST00000543658 PLEKHG1Q9ULL1 1385 aa16.93■□□□□ 0.3
DDB1-223ENST00000543658 RALGAPBQ86X10 1494 aa16.93■□□□□ 0.3
DDB1-223ENST00000543658 NRXN3Q9Y4C0 1643 aa16.92■□□□□ 0.3
DDB1-223ENST00000543658 SETD1AO15047 1707 aaKnown RBP16.91■□□□□ 0.3
DDB1-223ENST00000543658 LTKP29376 864 aa16.91■□□□□ 0.3
DDB1-223ENST00000543658 HSPA2P54652 639 aa16.91■□□□□ 0.3
DDB1-223ENST00000543658 ALKQ9UM73 1620 aa16.91■□□□□ 0.3
DDB1-223ENST00000543658 ROCK2O75116 1388 aaKnown RBP16.9■□□□□ 0.3
DDB1-223ENST00000543658 STRCQ7RTU9 1775 aa16.9■□□□□ 0.3
DDB1-223ENST00000543658 NPHP4O75161 1426 aaPredicted RBP16.89■□□□□ 0.29
DDB1-223ENST00000543658 NBPF8Q3BBV2 869 aa16.89■□□□□ 0.29
DDB1-223ENST00000543658 MED14O60244 1454 aa16.88■□□□□ 0.29
DDB1-223ENST00000543658 NCKAP5LQ9HCH0 1330 aa16.88■□□□□ 0.29
DDB1-223ENST00000543658 CFAP70Q5T0N1 1121 aa16.86■□□□□ 0.29
DDB1-223ENST00000543658 C14orf93Q9H972 538 aaKnown RBP16.85■□□□□ 0.29
DDB1-223ENST00000543658 KNDC1Q76NI1 1749 aa16.84■□□□□ 0.29
DDB1-223ENST00000543658 CARD11Q9BXL7 1154 aa16.84■□□□□ 0.29
DDB1-223ENST00000543658 ADAMTS13Q76LX8 1427 aa16.83■□□□□ 0.28
DDB1-223ENST00000543658 CHD2O14647 1828 aaKnown RBP16.82■□□□□ 0.28
DDB1-223ENST00000543658 ADGRB1O14514 1584 aa16.82■□□□□ 0.28
DDB1-223ENST00000543658 SLC26A8Q96RN1 970 aa16.82■□□□□ 0.28
DDB1-223ENST00000543658 ARHGEF28Q8N1W1 1705 aaKnown RBP16.82■□□□□ 0.28
DDB1-223ENST00000543658 ASXL1Q8IXJ9 1541 aa16.81■□□□□ 0.28
DDB1-223ENST00000543658 EIF3AQ14152 1382 aaKnown RBP16.81■□□□□ 0.28
DDB1-223ENST00000543658 GPRASP1Q5JY77 1395 aa16.81■□□□□ 0.28
DDB1-223ENST00000543658 NBPF1Q3BBV0 1214 aa16.8■□□□□ 0.28
DDB1-223ENST00000543658 TBX22Q9Y458 520 aa16.8■□□□□ 0.28
DDB1-223ENST00000543658 DMRT2Q9Y5R5 561 aa16.79■□□□□ 0.28
DDB1-223ENST00000543658 YTHDC2Q9H6S0 1430 aaKnown RBP16.79■□□□□ 0.28
DDB1-223ENST00000543658 PIK3R4Q99570 1358 aa16.78■□□□□ 0.28
DDB1-223ENST00000543658 TMEM132EQ6IEE7 984 aa16.78■□□□□ 0.28
DDB1-223ENST00000543658 XRN1Q8IZH2 1706 aaKnown RBP16.77■□□□□ 0.28
DDB1-223ENST00000543658 QRICH2Q9H0J4 1663 aa16.77■□□□□ 0.28
DDB1-223ENST00000543658 METP08581 1390 aa16.77■□□□□ 0.27
DDB1-223ENST00000543658 USP47Q96K76 1375 aa16.77■□□□□ 0.27
DDB1-223ENST00000543658 CPS1P31327 1500 aa16.76■□□□□ 0.27
DDB1-223ENST00000543658 EIF4G2P78344 907 aaKnown RBP eCLIP16.76■□□□□ 0.27
DDB1-223ENST00000543658 LRPPRCP42704 1394 aaKnown RBP16.76■□□□□ 0.27
DDB1-223ENST00000543658 STK26Q9P289 416 aa16.75■□□□□ 0.27
DDB1-223ENST00000543658 NWD1Q149M9 1564 aa16.75■□□□□ 0.27
DDB1-223ENST00000543658 DLC1Q96QB1 1528 aa16.75■□□□□ 0.27
DDB1-223ENST00000543658 TRAK1Q9UPV9 953 aa16.74■□□□□ 0.27
DDB1-223ENST00000543658 AMOTL2Q9Y2J4 779 aa16.71■□□□□ 0.27
DDB1-223ENST00000543658 ABCC11Q96J66 1382 aa16.71■□□□□ 0.27
DDB1-223ENST00000543658 TECPR2O15040 1411 aa16.7■□□□□ 0.26
DDB1-223ENST00000543658 PTCH1Q13635 1447 aa16.7■□□□□ 0.26
DDB1-223ENST00000543658 PTPRUQ92729 1446 aa16.7■□□□□ 0.26
DDB1-223ENST00000543658 STRCP1A6NGW2 1772 aa16.7■□□□□ 0.26
DDB1-223ENST00000543658 NKTRP30414 1462 aaKnown RBP16.7■□□□□ 0.26
DDB1-223ENST00000543658 POGKQ9P215 609 aa16.7■□□□□ 0.26
DDB1-223ENST00000543658 HSPA5P11021 654 aaKnown RBP16.69■□□□□ 0.26
DDB1-223ENST00000543658 CENPJQ9HC77 1338 aaPredicted RBP16.69■□□□□ 0.26
DDB1-223ENST00000543658 KCNA6P17658 529 aa16.68■□□□□ 0.26
DDB1-223ENST00000543658 FAM135BQ49AJ0 1406 aa16.68■□□□□ 0.26
DDB1-223ENST00000543658 ST20-MTHFSA0A0A6YYL1 179 aa16.66■□□□□ 0.26
DDB1-223ENST00000543658 PRAM1Q96QH2 718 aa16.66■□□□□ 0.26
DDB1-223ENST00000543658 SLC24A1O60721 1099 aa16.65■□□□□ 0.26
DDB1-223ENST00000543658 SAFB2Q14151 953 aaKnown RBP eCLIP16.65■□□□□ 0.26
DDB1-223ENST00000543658 SIRT1Q96EB6 747 aa16.64■□□□□ 0.25
DDB1-223ENST00000543658 NALCNQ8IZF0 1738 aa16.64■□□□□ 0.25
DDB1-223ENST00000543658 ROBO2Q9HCK4 1378 aa16.64■□□□□ 0.25
DDB1-223ENST00000543658 HIRIP3Q9BW71 556 aaPredicted RBP16.63■□□□□ 0.25
DDB1-223ENST00000543658 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.62■□□□□ 0.25
DDB1-223ENST00000543658 C14orf37Q86TY3 774 aa16.62■□□□□ 0.25
DDB1-223ENST00000543658 PROSER2Q86WR7 435 aaPredicted RBP16.62■□□□□ 0.25
DDB1-223ENST00000543658 ADGRB2O60241 1585 aa16.62■□□□□ 0.25
DDB1-223ENST00000543658 ZNF335Q9H4Z2 1342 aaPredicted RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms