RNA–Protein interactions for RNA: ENST00000543496.3

TPBG-203, Transcript of trophoblast glycoprotein, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TPBG, Length 2,881 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPBG-203ENST00000543496 WDR7Q9Y4E6 1490 aa22.36■■□□□ 1.17
TPBG-203ENST00000543496 SYNJ2O15056 1496 aa22.35■■□□□ 1.17
TPBG-203ENST00000543496 APAF1O14727 1248 aa22.33■■□□□ 1.17
TPBG-203ENST00000543496 CDC42BPBQ9Y5S2 1711 aa22.33■■□□□ 1.17
TPBG-203ENST00000543496 IGHDP01880 384 aa22.32■■□□□ 1.16
TPBG-203ENST00000543496 RSPH4AQ5TD94 716 aa22.31■■□□□ 1.16
TPBG-203ENST00000543496 UNC13BO14795 1591 aa22.31■■□□□ 1.16
TPBG-203ENST00000543496 SYCP2Q9BX26 1530 aa22.3■■□□□ 1.16
TPBG-203ENST00000543496 NUP160Q12769 1436 aa22.3■■□□□ 1.16
TPBG-203ENST00000543496 EIF3AQ14152 1382 aaKnown RBP22.29■■□□□ 1.16
TPBG-203ENST00000543496 TRMT2AQ8IZ69 625 aaKnown RBP22.28■■□□□ 1.16
TPBG-203ENST00000543496 NKTRP30414 1462 aaKnown RBP22.28■■□□□ 1.16
TPBG-203ENST00000543496 SEC24BO95487 1268 aa22.28■■□□□ 1.16
TPBG-203ENST00000543496 USP19O94966 1318 aa22.28■■□□□ 1.16
TPBG-203ENST00000543496 PREX2Q70Z35 1606 aa22.27■■□□□ 1.15
TPBG-203ENST00000543496 SLKQ9H2G2 1235 aaPredicted RBP22.26■■□□□ 1.15
TPBG-203ENST00000543496 POGKQ9P215 609 aa22.26■■□□□ 1.15
TPBG-203ENST00000543496 DMRT2Q9Y5R5 561 aa22.26■■□□□ 1.15
TPBG-203ENST00000543496 CLASP1Q7Z460 1538 aa22.25■■□□□ 1.15
TPBG-203ENST00000543496 RNF17Q9BXT8 1623 aaKnown RBP22.25■■□□□ 1.15
TPBG-203ENST00000543496 IQGAP3Q86VI3 1631 aa22.25■■□□□ 1.15
TPBG-203ENST00000543496 ASXL1Q8IXJ9 1541 aa22.24■■□□□ 1.15
TPBG-203ENST00000543496 CANXP27824 592 aaKnown RBP22.24■■□□□ 1.15
TPBG-203ENST00000543496 PIK3C2GO75747 1445 aa22.24■■□□□ 1.15
TPBG-203ENST00000543496 COG6Q9Y2V7 657 aa22.23■■□□□ 1.15
TPBG-203ENST00000543496 ARHGAP5Q13017 1502 aa22.23■■□□□ 1.15
TPBG-203ENST00000543496 E9PSI1 815 aa22.23■■□□□ 1.15
TPBG-203ENST00000543496 CDCA8Q53HL2 280 aa22.23■■□□□ 1.15
TPBG-203ENST00000543496 PANK1Q8TE04 598 aa22.23■■□□□ 1.15
TPBG-203ENST00000543496 VIRMAQ69YN4 1812 aaKnown RBP22.22■■□□□ 1.15
TPBG-203ENST00000543496 FAM43AQ8N2R8 423 aa22.21■■□□□ 1.15
TPBG-203ENST00000543496 BECN1Q14457 450 aa22.2■■□□□ 1.14
TPBG-203ENST00000543496 CLUAP1Q96AJ1 413 aa22.2■■□□□ 1.14
TPBG-203ENST00000543496 CGNL1Q0VF96 1302 aa22.2■■□□□ 1.14
TPBG-203ENST00000543496 SYNMO15061 1565 aa22.2■■□□□ 1.14
TPBG-203ENST00000543496 IQGAP1P46940 1657 aa22.18■■□□□ 1.14
TPBG-203ENST00000543496 CENPJQ9HC77 1338 aaPredicted RBP22.18■■□□□ 1.14
TPBG-203ENST00000543496 MAPK8IP3Q9UPT6 1336 aa22.18■■□□□ 1.14
TPBG-203ENST00000543496 ATP10AO60312 1499 aa22.18■■□□□ 1.14
TPBG-203ENST00000543496 MAST1Q9Y2H9 1570 aa22.17■■□□□ 1.14
TPBG-203ENST00000543496 PDE3AQ14432 1141 aa22.17■■□□□ 1.14
TPBG-203ENST00000543496 ABCC2Q92887 1545 aa22.17■■□□□ 1.14
TPBG-203ENST00000543496 MADDQ8WXG6 1647 aa22.16■■□□□ 1.14
TPBG-203ENST00000543496 TTC37Q6PGP7 1564 aa22.15■■□□□ 1.14
TPBG-203ENST00000543496 SCAF11Q99590 1463 aaKnown RBP22.15■■□□□ 1.14
TPBG-203ENST00000543496 ARXQ96QS3 562 aa22.14■■□□□ 1.14
TPBG-203ENST00000543496 NEUROD2Q15784 382 aa22.13■■□□□ 1.13
TPBG-203ENST00000543496 MYOM1P52179 1685 aa22.13■■□□□ 1.13
TPBG-203ENST00000543496 PLXNC1O60486 1568 aa22.13■■□□□ 1.13
TPBG-203ENST00000543496 RSPH6AQ9H0K4 717 aa22.13■■□□□ 1.13
TPBG-203ENST00000543496 DUOX2Q9NRD8 1548 aa22.12■■□□□ 1.13
TPBG-203ENST00000543496 ERCC6Q03468 1493 aa22.12■■□□□ 1.13
TPBG-203ENST00000543496 NPC1L1Q9UHC9 1359 aa22.11■■□□□ 1.13
TPBG-203ENST00000543496 WWC1Q8IX03 1113 aa22.11■■□□□ 1.13
TPBG-203ENST00000543496 NLRP1Q9C000 1473 aa22.1■■□□□ 1.13
TPBG-203ENST00000543496 SPRYD3Q8NCJ5 442 aa22.09■■□□□ 1.13
TPBG-203ENST00000543496 UPF2Q9HAU5 1272 aaKnown RBP22.09■■□□□ 1.13
TPBG-203ENST00000543496 RRP7AQ9Y3A4 280 aaKnown RBP22.09■■□□□ 1.13
TPBG-203ENST00000543496 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.09■■□□□ 1.13
TPBG-203ENST00000543496 VSIG10Q8N0Z9 540 aa22.09■■□□□ 1.13
TPBG-203ENST00000543496 TNNQ9UQP3 1299 aa22.09■■□□□ 1.13
TPBG-203ENST00000543496 ZMYND15Q9H091 742 aa22.08■■□□□ 1.13
TPBG-203ENST00000543496 ANTXR1Q9H6X2 564 aa22.08■■□□□ 1.13
TPBG-203ENST00000543496 CARD14Q9BXL6 1004 aa22.08■■□□□ 1.12
TPBG-203ENST00000543496 BCL2L13Q9BXK5 485 aa22.07■■□□□ 1.12
TPBG-203ENST00000543496 PCDHB15Q9Y5E8 787 aa22.07■■□□□ 1.12
TPBG-203ENST00000543496 RRAGDQ9NQL2 400 aaPredicted RBP22.07■■□□□ 1.12
TPBG-203ENST00000543496 TBC1D2Q9BYX2 928 aa22.06■■□□□ 1.12
TPBG-203ENST00000543496 NINLQ9Y2I6 1382 aa22.06■■□□□ 1.12
TPBG-203ENST00000543496 L1TD1Q5T7N2 865 aaKnown RBP22.06■■□□□ 1.12
TPBG-203ENST00000543496 KDM5AP29375 1690 aaKnown RBP22.06■■□□□ 1.12
TPBG-203ENST00000543496 PDZRN3Q9UPQ7 1066 aa22.05■■□□□ 1.12
TPBG-203ENST00000543496 RLBP1P12271 317 aa22.05■■□□□ 1.12
TPBG-203ENST00000543496 TNNT2P45379 298 aaPredicted RBP22.05■■□□□ 1.12
TPBG-203ENST00000543496 PMFBP1Q8TBY8 1022 aa22.05■■□□□ 1.12
TPBG-203ENST00000543496 TBC1D32Q96NH3 1257 aa22.05■■□□□ 1.12
TPBG-203ENST00000543496 SPHKAPQ2M3C7 1700 aa22.04■■□□□ 1.12
TPBG-203ENST00000543496 SCAPERQ9BY12 1400 aa22.04■■□□□ 1.12
TPBG-203ENST00000543496 NGEFQ8N5V2 710 aa22.04■■□□□ 1.12
TPBG-203ENST00000543496 RARSP54136 660 aaKnown RBP22.03■■□□□ 1.12
TPBG-203ENST00000543496 PLEKHG5O94827 1062 aa22.02■■□□□ 1.12
TPBG-203ENST00000543496 CFAP70Q5T0N1 1121 aa22.01■■□□□ 1.11
TPBG-203ENST00000543496 GZF1Q9H116 711 aaPredicted RBP22.01■■□□□ 1.11
TPBG-203ENST00000543496 CEP152O94986 1710 aa22■■□□□ 1.11
TPBG-203ENST00000543496 CLTCL1P53675 1640 aa21.98■■□□□ 1.11
TPBG-203ENST00000543496 ERVK-7P63135 1459 aa21.98■■□□□ 1.11
TPBG-203ENST00000543496 TRPM2O94759 1503 aa21.98■■□□□ 1.11
TPBG-203ENST00000543496 TCP11L2Q8N4U5 519 aa21.97■■□□□ 1.11
TPBG-203ENST00000543496 XRCC6P12956 609 aaKnown RBP eCLIP21.97■■□□□ 1.11
TPBG-203ENST00000543496 POLR3AO14802 1390 aaPredicted RBP21.96■■□□□ 1.11
TPBG-203ENST00000543496 GOLGA6L3A6NEY3 463 aa21.96■■□□□ 1.11
TPBG-203ENST00000543496 STAC3Q96MF2 364 aa21.96■■□□□ 1.11
TPBG-203ENST00000543496 RWDD1Q9H446 243 aaPredicted RBP21.96■■□□□ 1.11
TPBG-203ENST00000543496 MORC1Q86VD1 984 aa21.95■■□□□ 1.1
TPBG-203ENST00000543496 RUNDC1Q96C34 613 aa21.95■■□□□ 1.1
TPBG-203ENST00000543496 TRAPPC8Q9Y2L5 1435 aa21.95■■□□□ 1.1
TPBG-203ENST00000543496 MCM4P33991 863 aa21.94■■□□□ 1.1
TPBG-203ENST00000543496 PANK2Q9BZ23 570 aa21.94■■□□□ 1.1
TPBG-203ENST00000543496 GLIPR1L2Q4G1C9 344 aa21.93■■□□□ 1.1
TPBG-203ENST00000543496 EFCAB2Q5VUJ9 269 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms