RNA–Protein interactions for RNA: ENST00000543494.1

AP003419.2-201, humanhuman

APPRIS P1 TSL 3 BASIC

Gene AP003419.2, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003419.2-201ENST00000543494 SOCS7O14512 581 aa22.06■■□□□ 1.12
AP003419.2-201ENST00000543494 XIRP1Q702N8 1843 aaKnown RBP22.06■■□□□ 1.12
AP003419.2-201ENST00000543494 RIMS2Q9UQ26 1411 aa22.06■■□□□ 1.12
AP003419.2-201ENST00000543494 TMEM94Q12767 1356 aa22.05■■□□□ 1.12
AP003419.2-201ENST00000543494 PLEKHG1Q9ULL1 1385 aa22.05■■□□□ 1.12
AP003419.2-201ENST00000543494 HDGFP51858 240 aaKnown RBP22.05■■□□□ 1.12
AP003419.2-201ENST00000543494 NWD1Q149M9 1564 aa22.04■■□□□ 1.12
AP003419.2-201ENST00000543494 MED1Q15648 1581 aaPredicted RBP22.03■■□□□ 1.12
AP003419.2-201ENST00000543494 NKTRP30414 1462 aaKnown RBP22.03■■□□□ 1.12
AP003419.2-201ENST00000543494 BCANQ96GW7 911 aa22.02■■□□□ 1.12
AP003419.2-201ENST00000543494 RRBP1Q9P2E9 1410 aaKnown RBP22.02■■□□□ 1.12
AP003419.2-201ENST00000543494 MYO5BQ9ULV0 1848 aa22.01■■□□□ 1.11
AP003419.2-201ENST00000543494 PPP1R15AO75807 674 aaPredicted RBP22.01■■□□□ 1.11
AP003419.2-201ENST00000543494 CHGAP10645 457 aaKnown RBP22■■□□□ 1.11
AP003419.2-201ENST00000543494 PROSER2Q86WR7 435 aaPredicted RBP22■■□□□ 1.11
AP003419.2-201ENST00000543494 ABCF1Q8NE71 845 aaKnown RBP eCLIP22■■□□□ 1.11
AP003419.2-201ENST00000543494 FAM135BQ49AJ0 1406 aa21.97■■□□□ 1.11
AP003419.2-201ENST00000543494 SENP3Q9H4L4 574 aaPredicted RBP21.96■■□□□ 1.11
AP003419.2-201ENST00000543494 TBX22Q9Y458 520 aa21.96■■□□□ 1.11
AP003419.2-201ENST00000543494 RBM33Q96EV2 1170 aaKnown RBP21.95■■□□□ 1.1
AP003419.2-201ENST00000543494 ADAMTS13Q76LX8 1427 aa21.94■■□□□ 1.1
AP003419.2-201ENST00000543494 CHD2O14647 1828 aaKnown RBP21.92■■□□□ 1.1
AP003419.2-201ENST00000543494 NUTM2DQ5VT03 806 aaPredicted RBP21.92■■□□□ 1.1
AP003419.2-201ENST00000543494 DIP2AQ14689 1571 aa21.91■■□□□ 1.1
AP003419.2-201ENST00000543494 NAIPQ13075 1403 aa21.91■■□□□ 1.1
AP003419.2-201ENST00000543494 MSH6P52701 1360 aa21.91■■□□□ 1.1
AP003419.2-201ENST00000543494 PIK3R4Q99570 1358 aa21.9■■□□□ 1.1
AP003419.2-201ENST00000543494 SPHKAPQ2M3C7 1700 aa21.89■■□□□ 1.09
AP003419.2-201ENST00000543494 NCOA3Q9Y6Q9 1424 aa21.89■■□□□ 1.09
AP003419.2-201ENST00000543494 PHF23Q9BUL5 403 aaPredicted RBP21.87■■□□□ 1.09
AP003419.2-201ENST00000543494 ROBO1Q9Y6N7 1651 aa21.86■■□□□ 1.09
AP003419.2-201ENST00000543494 HFM1A2PYH4 1435 aa21.84■■□□□ 1.09
AP003419.2-201ENST00000543494 SLAIN2Q9P270 581 aa21.84■■□□□ 1.09
AP003419.2-201ENST00000543494 TRPM2O94759 1503 aa21.84■■□□□ 1.09
AP003419.2-201ENST00000543494 SETBP1Q9Y6X0 1596 aa21.82■■□□□ 1.08
AP003419.2-201ENST00000543494 PTPRUQ92729 1446 aa21.8■■□□□ 1.08
AP003419.2-201ENST00000543494 CLTCL1P53675 1640 aa21.8■■□□□ 1.08
AP003419.2-201ENST00000543494 ZNF326Q5BKZ1 582 aaKnown RBP21.8■■□□□ 1.08
AP003419.2-201ENST00000543494 AMOTL2Q9Y2J4 779 aa21.8■■□□□ 1.08
AP003419.2-201ENST00000543494 NRXN3Q9Y4C0 1643 aa21.8■■□□□ 1.08
AP003419.2-201ENST00000543494 C14orf37Q86TY3 774 aa21.78■■□□□ 1.08
AP003419.2-201ENST00000543494 C19orf44Q9H6X5 657 aa21.78■■□□□ 1.08
AP003419.2-201ENST00000543494 NEXMIFQ5QGS0 1516 aa21.76■■□□□ 1.07
AP003419.2-201ENST00000543494 CADPS2Q86UW7 1296 aa21.76■■□□□ 1.07
AP003419.2-201ENST00000543494 TRIM52Q96A61 297 aa21.75■■□□□ 1.07
AP003419.2-201ENST00000543494 XRN1Q8IZH2 1706 aaKnown RBP21.74■■□□□ 1.07
AP003419.2-201ENST00000543494 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.74■■□□□ 1.07
AP003419.2-201ENST00000543494 METP08581 1390 aa21.74■■□□□ 1.07
AP003419.2-201ENST00000543494 ATF3P18847 181 aa21.73■■□□□ 1.07
AP003419.2-201ENST00000543494 RGS17Q9UGC6 210 aaPredicted RBP21.73■■□□□ 1.07
AP003419.2-201ENST00000543494 SLC4A1APQ9BWU0 796 aaKnown RBP21.72■■□□□ 1.07
AP003419.2-201ENST00000543494 PHLPP1O60346 1717 aa21.72■■□□□ 1.07
AP003419.2-201ENST00000543494 DCCP43146 1447 aa21.72■■□□□ 1.07
AP003419.2-201ENST00000543494 JCADQ9P266 1359 aa21.71■■□□□ 1.07
AP003419.2-201ENST00000543494 KIF1BO60333 1816 aa21.71■■□□□ 1.07
AP003419.2-201ENST00000543494 COL16A1Q07092 1604 aaPredicted RBP21.69■■□□□ 1.06
AP003419.2-201ENST00000543494 AHDC1Q5TGY3 1603 aaPredicted RBP21.67■■□□□ 1.06
AP003419.2-201ENST00000543494 RPGRIP1LQ68CZ1 1315 aa21.66■■□□□ 1.06
AP003419.2-201ENST00000543494 VGFO15240 615 aaPredicted RBP21.66■■□□□ 1.06
AP003419.2-201ENST00000543494 BRINP3Q76B58 766 aa21.64■■□□□ 1.05
AP003419.2-201ENST00000543494 MST1RQ04912 1400 aa21.63■■□□□ 1.05
AP003419.2-201ENST00000543494 ADGRL3Q9HAR2 1447 aa21.63■■□□□ 1.05
AP003419.2-201ENST00000543494 SPATA31A6Q5VVP1 1343 aa21.6■■□□□ 1.05
AP003419.2-201ENST00000543494 FOXD1Q16676 465 aa21.6■■□□□ 1.05
AP003419.2-201ENST00000543494 POTEAQ6S8J7 498 aa21.6■■□□□ 1.05
AP003419.2-201ENST00000543494 PTCH1Q13635 1447 aa21.6■■□□□ 1.05
AP003419.2-201ENST00000543494 ASXL1Q8IXJ9 1541 aa21.6■■□□□ 1.05
AP003419.2-201ENST00000543494 SETD1AO15047 1707 aaKnown RBP21.59■■□□□ 1.05
AP003419.2-201ENST00000543494 PRAG1Q86YV5 1406 aa21.59■■□□□ 1.05
AP003419.2-201ENST00000543494 CCDC144AA2RUR9 1427 aa21.57■■□□□ 1.04
AP003419.2-201ENST00000543494 MPHOSPH9Q99550 1183 aa21.57■■□□□ 1.04
AP003419.2-201ENST00000543494 PPLO60437 1756 aa21.56■■□□□ 1.04
AP003419.2-201ENST00000543494 LRP6O75581 1613 aa21.56■■□□□ 1.04
AP003419.2-201ENST00000543494 NALCNQ8IZF0 1738 aa21.56■■□□□ 1.04
AP003419.2-201ENST00000543494 ROBO2Q9HCK4 1378 aa21.56■■□□□ 1.04
AP003419.2-201ENST00000543494 SHPRHQ149N8 1683 aa21.56■■□□□ 1.04
AP003419.2-201ENST00000543494 SPATA31E1Q6ZUB1 1445 aa21.54■■□□□ 1.04
AP003419.2-201ENST00000543494 SETD5Q9C0A6 1442 aa21.54■■□□□ 1.04
AP003419.2-201ENST00000543494 ACIN1Q9UKV3 1341 aaKnown RBP21.53■■□□□ 1.04
AP003419.2-201ENST00000543494 NHSL1Q5SYE7 1610 aa21.52■■□□□ 1.04
AP003419.2-201ENST00000543494 ANKRD30BQ9BXX2 1392 aa21.5■■□□□ 1.03
AP003419.2-201ENST00000543494 C1orf167Q5SNV9 1468 aa21.5■■□□□ 1.03
AP003419.2-201ENST00000543494 ADGRF5Q8IZF2 1346 aa21.5■■□□□ 1.03
AP003419.2-201ENST00000543494 RGL3Q3MIN7 710 aa21.49■■□□□ 1.03
AP003419.2-201ENST00000543494 MEX3CQ5U5Q3 659 aaKnown RBP21.49■■□□□ 1.03
AP003419.2-201ENST00000543494 LRRC59Q96AG4 307 aaKnown RBP21.48■■□□□ 1.03
AP003419.2-201ENST00000543494 ZNF772Q68DY9 489 aaPredicted RBP21.46■■□□□ 1.03
AP003419.2-201ENST00000543494 DDX17Q92841 729 aaKnown RBP21.46■■□□□ 1.03
AP003419.2-201ENST00000543494 IFT172Q9UG01 1749 aa21.45■■□□□ 1.02
AP003419.2-201ENST00000543494 TECPR2O15040 1411 aa21.44■■□□□ 1.02
AP003419.2-201ENST00000543494 PIK3C2GO75747 1445 aa21.44■■□□□ 1.02
AP003419.2-201ENST00000543494 LAMC1P11047 1609 aa21.44■■□□□ 1.02
AP003419.2-201ENST00000543494 NUTM2BA6NNL0 878 aaPredicted RBP21.43■■□□□ 1.02
AP003419.2-201ENST00000543494 NUTM2EB1AL46 878 aaPredicted RBP21.43■■□□□ 1.02
AP003419.2-201ENST00000543494 NUTM2AQ8IVF1 878 aaPredicted RBP21.43■■□□□ 1.02
AP003419.2-201ENST00000543494 PNPLA6Q8IY17 1366 aa21.43■■□□□ 1.02
AP003419.2-201ENST00000543494 LRPPRCP42704 1394 aaKnown RBP21.42■■□□□ 1.02
AP003419.2-201ENST00000543494 ORAI2Q96SN7 254 aa21.42■■□□□ 1.02
AP003419.2-201ENST00000543494 CDC42BPGQ6DT37 1551 aa21.41■■□□□ 1.02
AP003419.2-201ENST00000543494 ABCC11Q96J66 1382 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms