RNA–Protein interactions for RNA: ENST00000543475.1

SMCR5-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 5, humanhuman

BASIC

Gene SMCR5, Length 2,844 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR5-201ENST00000543475 NKTRP30414 1462 aaKnown RBP16.16■□□□□ 0.18
SMCR5-201ENST00000543475 CCDC141Q6ZP82 1450 aa16.16■□□□□ 0.18
SMCR5-201ENST00000543475 IGHDP01880 384 aa16.15■□□□□ 0.18
SMCR5-201ENST00000543475 WDR7Q9Y4E6 1490 aa16.15■□□□□ 0.18
SMCR5-201ENST00000543475 TRMT2AQ8IZ69 625 aaKnown RBP16.15■□□□□ 0.18
SMCR5-201ENST00000543475 SLKQ9H2G2 1235 aaPredicted RBP16.15■□□□□ 0.18
SMCR5-201ENST00000543475 AMER1Q5JTC6 1135 aaPredicted RBP16.14■□□□□ 0.17
SMCR5-201ENST00000543475 CHMP7Q8WUX9 453 aaPredicted RBP16.14■□□□□ 0.17
SMCR5-201ENST00000543475 NUP160Q12769 1436 aa16.14■□□□□ 0.17
SMCR5-201ENST00000543475 ATP10BO94823 1461 aa16.14■□□□□ 0.17
SMCR5-201ENST00000543475 SPINK5Q9NQ38 1064 aaPredicted RBP16.14■□□□□ 0.17
SMCR5-201ENST00000543475 MAPK8IP3Q9UPT6 1336 aa16.13■□□□□ 0.17
SMCR5-201ENST00000543475 SYNJ2O15056 1496 aa16.13■□□□□ 0.17
SMCR5-201ENST00000543475 ABCA8O94911 1581 aa16.13■□□□□ 0.17
SMCR5-201ENST00000543475 SEC24BO95487 1268 aa16.13■□□□□ 0.17
SMCR5-201ENST00000543475 APAF1O14727 1248 aa16.13■□□□□ 0.17
SMCR5-201ENST00000543475 L1TD1Q5T7N2 865 aaKnown RBP16.13■□□□□ 0.17
SMCR5-201ENST00000543475 JPH4Q96JJ6 628 aa16.12■□□□□ 0.17
SMCR5-201ENST00000543475 CGNL1Q0VF96 1302 aa16.12■□□□□ 0.17
SMCR5-201ENST00000543475 E9PSI1 815 aa16.11■□□□□ 0.17
SMCR5-201ENST00000543475 FBLN2P98095 1184 aa16.11■□□□□ 0.17
SMCR5-201ENST00000543475 RSPH4AQ5TD94 716 aa16.11■□□□□ 0.17
SMCR5-201ENST00000543475 PIK3C2GO75747 1445 aa16.11■□□□□ 0.17
SMCR5-201ENST00000543475 CANXP27824 592 aaKnown RBP16.1■□□□□ 0.17
SMCR5-201ENST00000543475 UNC13BO14795 1591 aa16.1■□□□□ 0.17
SMCR5-201ENST00000543475 CDCA8Q53HL2 280 aa16.1■□□□□ 0.17
SMCR5-201ENST00000543475 SAMD9LQ8IVG5 1584 aa16.1■□□□□ 0.17
SMCR5-201ENST00000543475 ASXL1Q8IXJ9 1541 aa16.1■□□□□ 0.17
SMCR5-201ENST00000543475 CLUAP1Q96AJ1 413 aa16.09■□□□□ 0.17
SMCR5-201ENST00000543475 RNF17Q9BXT8 1623 aaKnown RBP16.09■□□□□ 0.17
SMCR5-201ENST00000543475 PDE3AQ14432 1141 aa16.09■□□□□ 0.17
SMCR5-201ENST00000543475 UPF2Q9HAU5 1272 aaKnown RBP16.08■□□□□ 0.16
SMCR5-201ENST00000543475 COG6Q9Y2V7 657 aa16.08■□□□□ 0.16
SMCR5-201ENST00000543475 SYNMO15061 1565 aa16.08■□□□□ 0.16
SMCR5-201ENST00000543475 ABCC2Q92887 1545 aa16.07■□□□□ 0.16
SMCR5-201ENST00000543475 RRAGDQ9NQL2 400 aaPredicted RBP16.07■□□□□ 0.16
SMCR5-201ENST00000543475 CDC42BPBQ9Y5S2 1711 aa16.07■□□□□ 0.16
SMCR5-201ENST00000543475 IQGAP3Q86VI3 1631 aa16.06■□□□□ 0.16
SMCR5-201ENST00000543475 PANK1Q8TE04 598 aa16.06■□□□□ 0.16
SMCR5-201ENST00000543475 CENPJQ9HC77 1338 aaPredicted RBP16.06■□□□□ 0.16
SMCR5-201ENST00000543475 NINLQ9Y2I6 1382 aa16.05■□□□□ 0.16
SMCR5-201ENST00000543475 ANTXR1Q9H6X2 564 aa16.05■□□□□ 0.16
SMCR5-201ENST00000543475 NLRP1Q9C000 1473 aa16.05■□□□□ 0.16
SMCR5-201ENST00000543475 PREX2Q70Z35 1606 aa16.05■□□□□ 0.16
SMCR5-201ENST00000543475 ARXQ96QS3 562 aa16.04■□□□□ 0.16
SMCR5-201ENST00000543475 DMRT2Q9Y5R5 561 aa16.04■□□□□ 0.16
SMCR5-201ENST00000543475 IQGAP1P46940 1657 aa16.04■□□□□ 0.16
SMCR5-201ENST00000543475 SYCP2Q9BX26 1530 aa16.03■□□□□ 0.16
SMCR5-201ENST00000543475 NGEFQ8N5V2 710 aa16.03■□□□□ 0.16
SMCR5-201ENST00000543475 ATP10AO60312 1499 aa16.03■□□□□ 0.16
SMCR5-201ENST00000543475 NPC1L1Q9UHC9 1359 aa16.03■□□□□ 0.16
SMCR5-201ENST00000543475 PMFBP1Q8TBY8 1022 aa16.02■□□□□ 0.15
SMCR5-201ENST00000543475 TBC1D32Q96NH3 1257 aa16.02■□□□□ 0.15
SMCR5-201ENST00000543475 TBC1D2Q9BYX2 928 aa16.02■□□□□ 0.15
SMCR5-201ENST00000543475 GOLGA6L3A6NEY3 463 aa16.01■□□□□ 0.15
SMCR5-201ENST00000543475 MAST1Q9Y2H9 1570 aa16.01■□□□□ 0.15
SMCR5-201ENST00000543475 SCAF11Q99590 1463 aaKnown RBP16■□□□□ 0.15
SMCR5-201ENST00000543475 MADDQ8WXG6 1647 aa16■□□□□ 0.15
SMCR5-201ENST00000543475 MYOM1P52179 1685 aa16■□□□□ 0.15
SMCR5-201ENST00000543475 PLXNC1O60486 1568 aa15.99■□□□□ 0.15
SMCR5-201ENST00000543475 XRCC6P12956 609 aaKnown RBP eCLIP15.99■□□□□ 0.15
SMCR5-201ENST00000543475 WWC1Q8IX03 1113 aa15.99■□□□□ 0.15
SMCR5-201ENST00000543475 SPRYD3Q8NCJ5 442 aa15.98■□□□□ 0.15
SMCR5-201ENST00000543475 ARHGAP5Q13017 1502 aa15.98■□□□□ 0.15
SMCR5-201ENST00000543475 GZF1Q9H116 711 aaPredicted RBP15.98■□□□□ 0.15
SMCR5-201ENST00000543475 AAMPQ13685 434 aa15.97■□□□□ 0.15
SMCR5-201ENST00000543475 MCM4P33991 863 aa15.97■□□□□ 0.15
SMCR5-201ENST00000543475 PDZRN3Q9UPQ7 1066 aa15.97■□□□□ 0.15
SMCR5-201ENST00000543475 PCDHB15Q9Y5E8 787 aa15.96■□□□□ 0.15
SMCR5-201ENST00000543475 NAP1L5Q96NT1 182 aaPredicted RBP15.96■□□□□ 0.15
SMCR5-201ENST00000543475 PNNQ9H307 717 aaKnown RBP15.96■□□□□ 0.15
SMCR5-201ENST00000543475 KDM5AP29375 1690 aaKnown RBP15.96■□□□□ 0.15
SMCR5-201ENST00000543475 ZMYM3Q14202 1370 aa15.96■□□□□ 0.15
SMCR5-201ENST00000543475 FSD2A1L4K1 749 aa15.95■□□□□ 0.14
SMCR5-201ENST00000543475 DUOX2Q9NRD8 1548 aa15.95■□□□□ 0.14
SMCR5-201ENST00000543475 NEUROD2Q15784 382 aa15.95■□□□□ 0.14
SMCR5-201ENST00000543475 RARSP54136 660 aaKnown RBP15.95■□□□□ 0.14
SMCR5-201ENST00000543475 PANK2Q9BZ23 570 aa15.94■□□□□ 0.14
SMCR5-201ENST00000543475 RWDD1Q9H446 243 aaPredicted RBP15.94■□□□□ 0.14
SMCR5-201ENST00000543475 PODXL2Q9NZ53 605 aa15.94■□□□□ 0.14
SMCR5-201ENST00000543475 SCAPERQ9BY12 1400 aa15.93■□□□□ 0.14
SMCR5-201ENST00000543475 SPHKAPQ2M3C7 1700 aa15.93■□□□□ 0.14
SMCR5-201ENST00000543475 RLBP1P12271 317 aa15.93■□□□□ 0.14
SMCR5-201ENST00000543475 GLIPR1L2Q4G1C9 344 aa15.93■□□□□ 0.14
SMCR5-201ENST00000543475 CLCN1P35523 988 aa15.92■□□□□ 0.14
SMCR5-201ENST00000543475 CHMP5Q9NZZ3 219 aa15.92■□□□□ 0.14
SMCR5-201ENST00000543475 TRAK2O60296 914 aa15.91■□□□□ 0.14
SMCR5-201ENST00000543475 STAC3Q96MF2 364 aa15.91■□□□□ 0.14
SMCR5-201ENST00000543475 BCL2L13Q9BXK5 485 aa15.91■□□□□ 0.14
SMCR5-201ENST00000543475 TNNQ9UQP3 1299 aa15.91■□□□□ 0.14
SMCR5-201ENST00000543475 RRP7AQ9Y3A4 280 aaKnown RBP15.91■□□□□ 0.14
SMCR5-201ENST00000543475 TTC37Q6PGP7 1564 aa15.91■□□□□ 0.14
SMCR5-201ENST00000543475 ERCC6Q03468 1493 aa15.91■□□□□ 0.14
SMCR5-201ENST00000543475 CEP152O94986 1710 aa15.91■□□□□ 0.14
SMCR5-201ENST00000543475 CARD14Q9BXL6 1004 aa15.9■□□□□ 0.14
SMCR5-201ENST00000543475 C22orf23Q9BZE7 217 aa15.9■□□□□ 0.14
SMCR5-201ENST00000543475 POLR3AO14802 1390 aaPredicted RBP15.89■□□□□ 0.14
SMCR5-201ENST00000543475 MRE11P49959 708 aa15.89■□□□□ 0.13
SMCR5-201ENST00000543475 MFAP1P55081 439 aaKnown RBP15.88■□□□□ 0.13
SMCR5-201ENST00000543475 RUNDC1Q96C34 613 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms