RNA–Protein interactions for RNA: ENST00000543469.1

TRIM59-208, Transcript of tripartite motif containing 59, humanhuman

TSL 5 BASIC

Gene TRIM59, Length 4,615 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-208ENST00000543469 KIF1BO60333 1816 aa10.75□□□□□ -0.69
TRIM59-208ENST00000543469 CCER2I3L3R5 266 aa10.75□□□□□ -0.69
TRIM59-208ENST00000543469 NINLQ9Y2I6 1382 aa10.75□□□□□ -0.69
TRIM59-208ENST00000543469 WASHC2AQ641Q2 1341 aa10.75□□□□□ -0.69
TRIM59-208ENST00000543469 PUS7Q96PZ0 661 aaKnown RBP10.75□□□□□ -0.69
TRIM59-208ENST00000543469 CAMSAP1Q5T5Y3 1602 aa10.75□□□□□ -0.69
TRIM59-208ENST00000543469 NOS1P29475 1434 aa10.74□□□□□ -0.69
TRIM59-208ENST00000543469 SPHKAPQ2M3C7 1700 aa10.74□□□□□ -0.69
TRIM59-208ENST00000543469 PRAG1Q86YV5 1406 aa10.74□□□□□ -0.69
TRIM59-208ENST00000543469 C14orf93Q9H972 538 aaKnown RBP10.74□□□□□ -0.69
TRIM59-208ENST00000543469 VWDEQ8N2E2 1590 aa10.73□□□□□ -0.69
TRIM59-208ENST00000543469 ZFYVE9O95405 1425 aa10.73□□□□□ -0.69
TRIM59-208ENST00000543469 STK26Q9P289 416 aa10.73□□□□□ -0.69
TRIM59-208ENST00000543469 ATAD2Q6PL18 1390 aa10.73□□□□□ -0.69
TRIM59-208ENST00000543469 ST20-MTHFSA0A0A6YYL1 179 aa10.72□□□□□ -0.69
TRIM59-208ENST00000543469 WDR43Q15061 677 aaKnown RBP eCLIP10.72□□□□□ -0.69
TRIM59-208ENST00000543469 TRAK1Q9UPV9 953 aa10.71□□□□□ -0.69
TRIM59-208ENST00000543469 NUDCQ9Y266 331 aa10.71□□□□□ -0.69
TRIM59-208ENST00000543469 CGNL1Q0VF96 1302 aa10.71□□□□□ -0.69
TRIM59-208ENST00000543469 CCDC7Q96M83 1385 aa10.7□□□□□ -0.7
TRIM59-208ENST00000543469 KIF13AQ9H1H9 1805 aa10.7□□□□□ -0.7
TRIM59-208ENST00000543469 FBXO31Q5XUX0 539 aaPredicted RBP10.7□□□□□ -0.7
TRIM59-208ENST00000543469 SIRT1Q96EB6 747 aa10.7□□□□□ -0.7
TRIM59-208ENST00000543469 CFAP70Q5T0N1 1121 aa10.69□□□□□ -0.7
TRIM59-208ENST00000543469 AEBP2Q6ZN18 517 aaPredicted RBP10.69□□□□□ -0.7
TRIM59-208ENST00000543469 SPATA31E1Q6ZUB1 1445 aa10.68□□□□□ -0.7
TRIM59-208ENST00000543469 GPRASP1Q5JY77 1395 aa10.68□□□□□ -0.7
TRIM59-208ENST00000543469 ADGRB3O60242 1522 aa10.68□□□□□ -0.7
TRIM59-208ENST00000543469 A2ML1A8K2U0 1454 aa10.68□□□□□ -0.7
TRIM59-208ENST00000543469 CEP152O94986 1710 aa10.68□□□□□ -0.7
TRIM59-208ENST00000543469 TMEM2Q9UHN6 1383 aa10.68□□□□□ -0.7
TRIM59-208ENST00000543469 TBX22Q9Y458 520 aa10.67□□□□□ -0.7
TRIM59-208ENST00000543469 LAMC1P11047 1609 aa10.67□□□□□ -0.7
TRIM59-208ENST00000543469 NBPF8Q3BBV2 869 aa10.67□□□□□ -0.7
TRIM59-208ENST00000543469 E9PCH4 1651 aa10.67□□□□□ -0.7
TRIM59-208ENST00000543469 PIK3R4Q99570 1358 aa10.67□□□□□ -0.7
TRIM59-208ENST00000543469 FRMPD1Q5SYB0 1578 aa10.67□□□□□ -0.7
TRIM59-208ENST00000543469 MRS2Q9HD23 443 aa10.66□□□□□ -0.7
TRIM59-208ENST00000543469 PPRC1Q5VV67 1664 aaKnown RBP10.66□□□□□ -0.7
TRIM59-208ENST00000543469 ZNF692Q9BU19 519 aaPredicted RBP10.66□□□□□ -0.7
TRIM59-208ENST00000543469 MROH2AA6NES4 1674 aa10.66□□□□□ -0.7
TRIM59-208ENST00000543469 PLEKHG1Q9ULL1 1385 aa10.66□□□□□ -0.7
TRIM59-208ENST00000543469 MORC1Q86VD1 984 aa10.65□□□□□ -0.7
TRIM59-208ENST00000543469 CLTCQ00610 1675 aaKnown RBP10.65□□□□□ -0.7
TRIM59-208ENST00000543469 NUTM2DQ5VT03 806 aaPredicted RBP10.65□□□□□ -0.7
TRIM59-208ENST00000543469 LRPPRCP42704 1394 aaKnown RBP10.65□□□□□ -0.7
TRIM59-208ENST00000543469 UGGT1Q9NYU2 1555 aa10.65□□□□□ -0.7
TRIM59-208ENST00000543469 SPATA31D1Q6ZQQ2 1576 aa10.65□□□□□ -0.71
TRIM59-208ENST00000543469 ADGRF5Q8IZF2 1346 aa10.64□□□□□ -0.71
TRIM59-208ENST00000543469 ATF3P18847 181 aa10.64□□□□□ -0.71
TRIM59-208ENST00000543469 SYNMO15061 1565 aa10.64□□□□□ -0.71
TRIM59-208ENST00000543469 CLTCL1P53675 1640 aa10.63□□□□□ -0.71
TRIM59-208ENST00000543469 NGEFQ8N5V2 710 aa10.63□□□□□ -0.71
TRIM59-208ENST00000543469 NGDNQ8NEJ9 315 aaKnown RBP10.63□□□□□ -0.71
TRIM59-208ENST00000543469 HIRIP3Q9BW71 556 aaPredicted RBP10.62□□□□□ -0.71
TRIM59-208ENST00000543469 SBNO2Q9Y2G9 1366 aa10.62□□□□□ -0.71
TRIM59-208ENST00000543469 KIF7Q2M1P5 1343 aa10.62□□□□□ -0.71
TRIM59-208ENST00000543469 NSD2O96028 1365 aa10.62□□□□□ -0.71
TRIM59-208ENST00000543469 PROSER2Q86WR7 435 aaPredicted RBP10.62□□□□□ -0.71
TRIM59-208ENST00000543469 CEBPAP49715 358 aaPredicted RBP10.62□□□□□ -0.71
TRIM59-208ENST00000543469 YTHDC1Q96MU7 727 aaKnown RBP10.62□□□□□ -0.71
TRIM59-208ENST00000543469 PRAM1Q96QH2 718 aa10.62□□□□□ -0.71
TRIM59-208ENST00000543469 PREX1Q8TCU6 1659 aa10.61□□□□□ -0.71
TRIM59-208ENST00000543469 PLA2R1Q13018 1463 aa10.61□□□□□ -0.71
TRIM59-208ENST00000543469 MINK1Q8N4C8 1332 aaPredicted RBP10.61□□□□□ -0.71
TRIM59-208ENST00000543469 PSME1Q06323 249 aa10.61□□□□□ -0.71
TRIM59-208ENST00000543469 NLRP13Q86W25 1043 aa10.61□□□□□ -0.71
TRIM59-208ENST00000543469 MYBBP1AQ9BQG0 1328 aaKnown RBP10.61□□□□□ -0.71
TRIM59-208ENST00000543469 CNGB1Q14028 1251 aaPredicted RBP10.61□□□□□ -0.71
TRIM59-208ENST00000543469 SAFB2Q14151 953 aaKnown RBP eCLIP10.61□□□□□ -0.71
TRIM59-208ENST00000543469 NBPF1Q3BBV0 1214 aa10.61□□□□□ -0.71
TRIM59-208ENST00000543469 SETBP1Q9Y6X0 1596 aa10.6□□□□□ -0.71
TRIM59-208ENST00000543469 KIAA1210Q9ULL0 1709 aa10.6□□□□□ -0.71
TRIM59-208ENST00000543469 HAP1P54257 671 aaPredicted RBP10.6□□□□□ -0.71
TRIM59-208ENST00000543469 FER1L4A9Z1Z3 1794 aa10.6□□□□□ -0.71
TRIM59-208ENST00000543469 YTHDC2Q9H6S0 1430 aaKnown RBP10.6□□□□□ -0.71
TRIM59-208ENST00000543469 ABCC11Q96J66 1382 aa10.6□□□□□ -0.71
TRIM59-208ENST00000543469 COL17A1Q9UMD9 1497 aaPredicted RBP10.59□□□□□ -0.71
TRIM59-208ENST00000543469 MROH1Q8NDA8 1641 aa10.59□□□□□ -0.71
TRIM59-208ENST00000543469 PIK3C2GO75747 1445 aa10.59□□□□□ -0.71
TRIM59-208ENST00000543469 TMEM132EQ6IEE7 984 aa10.59□□□□□ -0.71
TRIM59-208ENST00000543469 COG3Q96JB2 828 aa10.58□□□□□ -0.72
TRIM59-208ENST00000543469 PANK3Q9H999 370 aa10.58□□□□□ -0.72
TRIM59-208ENST00000543469 DIP2AQ14689 1571 aa10.58□□□□□ -0.72
TRIM59-208ENST00000543469 AMOTL2Q9Y2J4 779 aa10.57□□□□□ -0.72
TRIM59-208ENST00000543469 FAM135BQ49AJ0 1406 aa10.57□□□□□ -0.72
TRIM59-208ENST00000543469 MAPK8IP3Q9UPT6 1336 aa10.57□□□□□ -0.72
TRIM59-208ENST00000543469 BRD4O60885 1362 aaPredicted RBP10.57□□□□□ -0.72
TRIM59-208ENST00000543469 CALD1Q05682 793 aaKnown RBP10.57□□□□□ -0.72
TRIM59-208ENST00000543469 CDK19Q9BWU1 502 aa10.57□□□□□ -0.72
TRIM59-208ENST00000543469 CHMP4AQ9BY43 222 aa10.56□□□□□ -0.72
TRIM59-208ENST00000543469 NPHP4O75161 1426 aaPredicted RBP10.56□□□□□ -0.72
TRIM59-208ENST00000543469 CCDC61Q9Y6R9 512 aa10.56□□□□□ -0.72
TRIM59-208ENST00000543469 WASLO00401 505 aaPredicted RBP10.55□□□□□ -0.72
TRIM59-208ENST00000543469 KCNA6P17658 529 aa10.55□□□□□ -0.72
TRIM59-208ENST00000543469 MIER1Q8N108 512 aa10.55□□□□□ -0.72
TRIM59-208ENST00000543469 SENP3Q9H4L4 574 aaPredicted RBP10.55□□□□□ -0.72
TRIM59-208ENST00000543469 KDM5AP29375 1690 aaKnown RBP10.54□□□□□ -0.72
TRIM59-208ENST00000543469 CC2D1BQ5T0F9 858 aaKnown RBP10.54□□□□□ -0.72
TRIM59-208ENST00000543469 RIMS1Q86UR5 1692 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms