RNA–Protein interactions for RNA: ENST00000543449.1

NPIPB4-217, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 685 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-217ENST00000543449 PLEKHG1Q9ULL1 1385 aa15.36■□□□□ 0.05
NPIPB4-217ENST00000543449 TMEM131LA2VDJ0 1609 aa15.36■□□□□ 0.05
NPIPB4-217ENST00000543449 BCANQ96GW7 911 aa15.36■□□□□ 0.05
NPIPB4-217ENST00000543449 ZFYVE9O95405 1425 aa15.35■□□□□ 0.05
NPIPB4-217ENST00000543449 SLC4A1APQ9BWU0 796 aaKnown RBP15.35■□□□□ 0.05
NPIPB4-217ENST00000543449 KCNA6P17658 529 aa15.34■□□□□ 0.05
NPIPB4-217ENST00000543449 SPHKAPQ2M3C7 1700 aa15.34■□□□□ 0.05
NPIPB4-217ENST00000543449 TRPM2O94759 1503 aa15.33■□□□□ 0.04
NPIPB4-217ENST00000543449 TBX22Q9Y458 520 aa15.31■□□□□ 0.04
NPIPB4-217ENST00000543449 LRRC7Q96NW7 1537 aa15.31■□□□□ 0.04
NPIPB4-217ENST00000543449 SLC26A8Q96RN1 970 aa15.3■□□□□ 0.04
NPIPB4-217ENST00000543449 PIK3R4Q99570 1358 aa15.3■□□□□ 0.04
NPIPB4-217ENST00000543449 DIP2AQ14689 1571 aa15.29■□□□□ 0.04
NPIPB4-217ENST00000543449 NKTRP30414 1462 aaKnown RBP15.29■□□□□ 0.04
NPIPB4-217ENST00000543449 SETD5Q9C0A6 1442 aa15.29■□□□□ 0.04
NPIPB4-217ENST00000543449 ZNF326Q5BKZ1 582 aaKnown RBP15.29■□□□□ 0.04
NPIPB4-217ENST00000543449 RPGRIP1LQ68CZ1 1315 aa15.27■□□□□ 0.04
NPIPB4-217ENST00000543449 MYO5BQ9ULV0 1848 aa15.27■□□□□ 0.03
NPIPB4-217ENST00000543449 PROSER2Q86WR7 435 aaPredicted RBP15.26■□□□□ 0.03
NPIPB4-217ENST00000543449 NWD1Q149M9 1564 aa15.26■□□□□ 0.03
NPIPB4-217ENST00000543449 SCAF1Q9H7N4 1312 aaKnown RBP15.25■□□□□ 0.03
NPIPB4-217ENST00000543449 MPHOSPH9Q99550 1183 aa15.25■□□□□ 0.03
NPIPB4-217ENST00000543449 NCOA3Q9Y6Q9 1424 aa15.25■□□□□ 0.03
NPIPB4-217ENST00000543449 STRCP1A6NGW2 1772 aa15.24■□□□□ 0.03
NPIPB4-217ENST00000543449 VGFO15240 615 aaPredicted RBP15.24■□□□□ 0.03
NPIPB4-217ENST00000543449 CLTCL1P53675 1640 aa15.24■□□□□ 0.03
NPIPB4-217ENST00000543449 KIF1BO60333 1816 aa15.23■□□□□ 0.03
NPIPB4-217ENST00000543449 HRCP23327 699 aa15.23■□□□□ 0.03
NPIPB4-217ENST00000543449 PIP4K2BP78356 416 aa15.23■□□□□ 0.03
NPIPB4-217ENST00000543449 CCDC144AA2RUR9 1427 aa15.23■□□□□ 0.03
NPIPB4-217ENST00000543449 ADAMTS13Q76LX8 1427 aa15.23■□□□□ 0.03
NPIPB4-217ENST00000543449 TMEM94Q12767 1356 aa15.23■□□□□ 0.03
NPIPB4-217ENST00000543449 NUTM2DQ5VT03 806 aaPredicted RBP15.22■□□□□ 0.03
NPIPB4-217ENST00000543449 SETBP1Q9Y6X0 1596 aa15.21■□□□□ 0.03
NPIPB4-217ENST00000543449 MSH6P52701 1360 aa15.21■□□□□ 0.02
NPIPB4-217ENST00000543449 RAB3GAP2Q9H2M9 1393 aa15.19■□□□□ 0.02
NPIPB4-217ENST00000543449 CHD2O14647 1828 aaKnown RBP15.19■□□□□ 0.02
NPIPB4-217ENST00000543449 NEXMIFQ5QGS0 1516 aa15.18■□□□□ 0.02
NPIPB4-217ENST00000543449 AMOTL2Q9Y2J4 779 aa15.17■□□□□ 0.02
NPIPB4-217ENST00000543449 ANKRD30BQ9BXX2 1392 aa15.16■□□□□ 0.02
NPIPB4-217ENST00000543449 FAM135BQ49AJ0 1406 aa15.16■□□□□ 0.02
NPIPB4-217ENST00000543449 HSPA1LP34931 641 aa15.15■□□□□ 0.02
NPIPB4-217ENST00000543449 C14orf37Q86TY3 774 aa15.15■□□□□ 0.02
NPIPB4-217ENST00000543449 ALKQ9UM73 1620 aa15.14■□□□□ 0.01
NPIPB4-217ENST00000543449 FOXD1Q16676 465 aa15.14■□□□□ 0.01
NPIPB4-217ENST00000543449 CADPS2Q86UW7 1296 aa15.14■□□□□ 0.01
NPIPB4-217ENST00000543449 C19orf44Q9H6X5 657 aa15.14■□□□□ 0.01
NPIPB4-217ENST00000543449 XIRP1Q702N8 1843 aaKnown RBP15.13■□□□□ 0.01
NPIPB4-217ENST00000543449 ATF3P18847 181 aa15.12■□□□□ 0.01
NPIPB4-217ENST00000543449 NRXN3Q9Y4C0 1643 aa15.12■□□□□ 0.01
NPIPB4-217ENST00000543449 DCCP43146 1447 aa15.11■□□□□ 0.01
NPIPB4-217ENST00000543449 SPATA31E1Q6ZUB1 1445 aa15.11■□□□□ 0.01
NPIPB4-217ENST00000543449 SLAIN2Q9P270 581 aa15.11■□□□□ 0.01
NPIPB4-217ENST00000543449 PTPRUQ92729 1446 aa15.1■□□□□ 0.01
NPIPB4-217ENST00000543449 METP08581 1390 aa15.1■□□□□ 0.01
NPIPB4-217ENST00000543449 DISP3Q9P2K9 1392 aa15.1■□□□□ 0.01
NPIPB4-217ENST00000543449 PPLO60437 1756 aa15.09■□□□□ 0.01
NPIPB4-217ENST00000543449 RGL3Q3MIN7 710 aa15.09■□□□□ 0.01
NPIPB4-217ENST00000543449 STAC3Q96MF2 364 aa15.09■□□□□ 0.01
NPIPB4-217ENST00000543449 XRN1Q8IZH2 1706 aaKnown RBP15.09■□□□□ 0.01
NPIPB4-217ENST00000543449 RBM33Q96EV2 1170 aaKnown RBP15.08■□□□□ 0
NPIPB4-217ENST00000543449 PTCH1Q13635 1447 aa15.08■□□□□ 0
NPIPB4-217ENST00000543449 PRAG1Q86YV5 1406 aa15.08■□□□□ 0
NPIPB4-217ENST00000543449 ADGRL3Q9HAR2 1447 aa15.04■□□□□ -0
NPIPB4-217ENST00000543449 ADGRF5Q8IZF2 1346 aa15.04■□□□□ -0
NPIPB4-217ENST00000543449 ROBO1Q9Y6N7 1651 aa15.03■□□□□ -0
NPIPB4-217ENST00000543449 MYOM2P54296 1465 aa15.03■□□□□ -0
NPIPB4-217ENST00000543449 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.03■□□□□ -0
NPIPB4-217ENST00000543449 PIK3C2GO75747 1445 aa15.02■□□□□ -0
NPIPB4-217ENST00000543449 SETD1AO15047 1707 aaKnown RBP15.01□□□□□ -0.01
NPIPB4-217ENST00000543449 IFT172Q9UG01 1749 aa15.01□□□□□ -0.01
NPIPB4-217ENST00000543449 LRPPRCP42704 1394 aaKnown RBP15□□□□□ -0.01
NPIPB4-217ENST00000543449 C14orf93Q9H972 538 aaKnown RBP15□□□□□ -0.01
NPIPB4-217ENST00000543449 ABCC11Q96J66 1382 aa14.99□□□□□ -0.01
NPIPB4-217ENST00000543449 SIRT1Q96EB6 747 aa14.99□□□□□ -0.01
NPIPB4-217ENST00000543449 NRXN1Q9ULB1 1477 aa14.99□□□□□ -0.01
NPIPB4-217ENST00000543449 TECPR2O15040 1411 aa14.99□□□□□ -0.01
NPIPB4-217ENST00000543449 LAMC1P11047 1609 aa14.99□□□□□ -0.01
NPIPB4-217ENST00000543449 DHX57Q6P158 1386 aaKnown RBP14.98□□□□□ -0.01
NPIPB4-217ENST00000543449 ROBO2Q9HCK4 1378 aa14.98□□□□□ -0.01
NPIPB4-217ENST00000543449 MED1Q15648 1581 aaPredicted RBP14.98□□□□□ -0.01
NPIPB4-217ENST00000543449 JCADQ9P266 1359 aa14.98□□□□□ -0.01
NPIPB4-217ENST00000543449 MST1RQ04912 1400 aa14.97□□□□□ -0.01
NPIPB4-217ENST00000543449 AHDC1Q5TGY3 1603 aaPredicted RBP14.96□□□□□ -0.01
NPIPB4-217ENST00000543449 BRINP3Q76B58 766 aa14.96□□□□□ -0.01
NPIPB4-217ENST00000543449 PHLPP1O60346 1717 aa14.95□□□□□ -0.02
NPIPB4-217ENST00000543449 YTHDC2Q9H6S0 1430 aaKnown RBP14.95□□□□□ -0.02
NPIPB4-217ENST00000543449 DCAF11Q8TEB1 546 aa14.94□□□□□ -0.02
NPIPB4-217ENST00000543449 STK26Q9P289 416 aa14.94□□□□□ -0.02
NPIPB4-217ENST00000543449 SPATA31A6Q5VVP1 1343 aa14.93□□□□□ -0.02
NPIPB4-217ENST00000543449 ASXL1Q8IXJ9 1541 aa14.93□□□□□ -0.02
NPIPB4-217ENST00000543449 KNDC1Q76NI1 1749 aa14.93□□□□□ -0.02
NPIPB4-217ENST00000543449 NALCNQ8IZF0 1738 aa14.93□□□□□ -0.02
NPIPB4-217ENST00000543449 CFAP70Q5T0N1 1121 aa14.92□□□□□ -0.02
NPIPB4-217ENST00000543449 TMEM132EQ6IEE7 984 aa14.92□□□□□ -0.02
NPIPB4-217ENST00000543449 C1orf167Q5SNV9 1468 aa14.92□□□□□ -0.02
NPIPB4-217ENST00000543449 CDC42BPGQ6DT37 1551 aa14.91□□□□□ -0.02
NPIPB4-217ENST00000543449 LRRC59Q96AG4 307 aaKnown RBP14.91□□□□□ -0.02
NPIPB4-217ENST00000543449 KDM2AQ9Y2K7 1162 aa14.9□□□□□ -0.02
NPIPB4-217ENST00000543449 COL16A1Q07092 1604 aaPredicted RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms