RNA–Protein interactions for RNA: ENST00000543428.5

PSME3-204, Transcript of proteasome activator subunit 3, humanhuman

TSL 2

Gene PSME3, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME3-204ENST00000543428 RIMS2Q9UQ26 1411 aa32.45■■■□□ 2.79
PSME3-204ENST00000543428 DISP3Q9P2K9 1392 aa32.45■■■□□ 2.78
PSME3-204ENST00000543428 SENP3Q9H4L4 574 aaPredicted RBP32.43■■■□□ 2.78
PSME3-204ENST00000543428 ZFYVE9O95405 1425 aa32.43■■■□□ 2.78
PSME3-204ENST00000543428 NAIPQ13075 1403 aa32.42■■■□□ 2.78
PSME3-204ENST00000543428 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.4■■■□□ 2.78
PSME3-204ENST00000543428 KCNA6P17658 529 aa32.39■■■□□ 2.78
PSME3-204ENST00000543428 PLEKHG1Q9ULL1 1385 aa32.38■■■□□ 2.77
PSME3-204ENST00000543428 HSPA1LP34931 641 aa32.38■■■□□ 2.77
PSME3-204ENST00000543428 ALKQ9UM73 1620 aa32.35■■■□□ 2.77
PSME3-204ENST00000543428 SPHKAPQ2M3C7 1700 aa32.34■■■□□ 2.77
PSME3-204ENST00000543428 NUTM2DQ5VT03 806 aaPredicted RBP32.34■■■□□ 2.77
PSME3-204ENST00000543428 PROSER2Q86WR7 435 aaPredicted RBP32.34■■■□□ 2.77
PSME3-204ENST00000543428 TRIM52Q96A61 297 aa32.33■■■□□ 2.77
PSME3-204ENST00000543428 XIRP1Q702N8 1843 aaKnown RBP32.33■■■□□ 2.77
PSME3-204ENST00000543428 HFM1A2PYH4 1435 aa32.32■■■□□ 2.76
PSME3-204ENST00000543428 TMEM94Q12767 1356 aa32.31■■■□□ 2.76
PSME3-204ENST00000543428 NKTRP30414 1462 aaKnown RBP32.27■■■□□ 2.76
PSME3-204ENST00000543428 NWD1Q149M9 1564 aa32.27■■■□□ 2.76
PSME3-204ENST00000543428 TBX22Q9Y458 520 aa32.26■■■□□ 2.75
PSME3-204ENST00000543428 ZNF326Q5BKZ1 582 aaKnown RBP32.25■■■□□ 2.75
PSME3-204ENST00000543428 RBM33Q96EV2 1170 aaKnown RBP32.25■■■□□ 2.75
PSME3-204ENST00000543428 CHD2O14647 1828 aaKnown RBP32.22■■■□□ 2.75
PSME3-204ENST00000543428 SLC4A1APQ9BWU0 796 aaKnown RBP32.2■■■□□ 2.75
PSME3-204ENST00000543428 DIP2AQ14689 1571 aa32.19■■■□□ 2.74
PSME3-204ENST00000543428 TRPM2O94759 1503 aa32.19■■■□□ 2.74
PSME3-204ENST00000543428 ADAMTS13Q76LX8 1427 aa32.18■■■□□ 2.74
PSME3-204ENST00000543428 CLTCL1P53675 1640 aa32.18■■■□□ 2.74
PSME3-204ENST00000543428 MSH6P52701 1360 aa32.16■■■□□ 2.74
PSME3-204ENST00000543428 KIF1BO60333 1816 aa32.13■■■□□ 2.73
PSME3-204ENST00000543428 ILDR2Q71H61 639 aa32.13■■■□□ 2.73
PSME3-204ENST00000543428 PIK3R4Q99570 1358 aa32.13■■■□□ 2.73
PSME3-204ENST00000543428 C14orf37Q86TY3 774 aa32.1■■■□□ 2.73
PSME3-204ENST00000543428 FAM135BQ49AJ0 1406 aa32.09■■■□□ 2.73
PSME3-204ENST00000543428 MED1Q15648 1581 aaPredicted RBP32.07■■■□□ 2.72
PSME3-204ENST00000543428 SETBP1Q9Y6X0 1596 aa32.06■■■□□ 2.72
PSME3-204ENST00000543428 AMOTL2Q9Y2J4 779 aa32.05■■■□□ 2.72
PSME3-204ENST00000543428 NCOA3Q9Y6Q9 1424 aa32.04■■■□□ 2.72
PSME3-204ENST00000543428 NEXMIFQ5QGS0 1516 aa32.04■■■□□ 2.72
PSME3-204ENST00000543428 NRXN3Q9Y4C0 1643 aa32.03■■■□□ 2.72
PSME3-204ENST00000543428 ROBO1Q9Y6N7 1651 aa32.02■■■□□ 2.72
PSME3-204ENST00000543428 SLAIN2Q9P270 581 aa32.02■■■□□ 2.72
PSME3-204ENST00000543428 FOXD1Q16676 465 aa32.01■■■□□ 2.71
PSME3-204ENST00000543428 PTPRUQ92729 1446 aa32■■■□□ 2.71
PSME3-204ENST00000543428 VGFO15240 615 aaPredicted RBP31.97■■■□□ 2.71
PSME3-204ENST00000543428 PHF23Q9BUL5 403 aaPredicted RBP31.97■■■□□ 2.71
PSME3-204ENST00000543428 ATF3P18847 181 aa31.96■■■□□ 2.71
PSME3-204ENST00000543428 MPHOSPH9Q99550 1183 aa31.96■■■□□ 2.71
PSME3-204ENST00000543428 C19orf44Q9H6X5 657 aa31.96■■■□□ 2.71
PSME3-204ENST00000543428 RPGRIP1LQ68CZ1 1315 aa31.95■■■□□ 2.7
PSME3-204ENST00000543428 METP08581 1390 aa31.94■■■□□ 2.7
PSME3-204ENST00000543428 CADPS2Q86UW7 1296 aa31.94■■■□□ 2.7
PSME3-204ENST00000543428 ACIN1Q9UKV3 1341 aaKnown RBP31.94■■■□□ 2.7
PSME3-204ENST00000543428 XRN1Q8IZH2 1706 aaKnown RBP31.92■■■□□ 2.7
PSME3-204ENST00000543428 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.92■■■□□ 2.7
PSME3-204ENST00000543428 CCDC144AA2RUR9 1427 aa31.92■■■□□ 2.7
PSME3-204ENST00000543428 SETD5Q9C0A6 1442 aa31.92■■■□□ 2.7
PSME3-204ENST00000543428 SOCS7O14512 581 aa31.9■■■□□ 2.7
PSME3-204ENST00000543428 PPLO60437 1756 aa31.86■■■□□ 2.69
PSME3-204ENST00000543428 PHLPP1O60346 1717 aa31.86■■■□□ 2.69
PSME3-204ENST00000543428 RGL3Q3MIN7 710 aa31.83■■■□□ 2.69
PSME3-204ENST00000543428 DCCP43146 1447 aa31.81■■■□□ 2.68
PSME3-204ENST00000543428 RAB3GAP2Q9H2M9 1393 aa31.78■■■□□ 2.68
PSME3-204ENST00000543428 SETD1AO15047 1707 aaKnown RBP31.76■■■□□ 2.67
PSME3-204ENST00000543428 SPATA31E1Q6ZUB1 1445 aa31.75■■■□□ 2.67
PSME3-204ENST00000543428 ADGRL3Q9HAR2 1447 aa31.75■■■□□ 2.67
PSME3-204ENST00000543428 JCADQ9P266 1359 aa31.74■■■□□ 2.67
PSME3-204ENST00000543428 ADGRF5Q8IZF2 1346 aa31.73■■■□□ 2.67
PSME3-204ENST00000543428 ANKRD30BQ9BXX2 1392 aa31.72■■■□□ 2.67
PSME3-204ENST00000543428 BRINP3Q76B58 766 aa31.72■■■□□ 2.67
PSME3-204ENST00000543428 PTCH1Q13635 1447 aa31.72■■■□□ 2.67
PSME3-204ENST00000543428 COL16A1Q07092 1604 aaPredicted RBP31.71■■■□□ 2.67
PSME3-204ENST00000543428 NALCNQ8IZF0 1738 aa31.7■■■□□ 2.67
PSME3-204ENST00000543428 ROBO2Q9HCK4 1378 aa31.69■■■□□ 2.66
PSME3-204ENST00000543428 MST1RQ04912 1400 aa31.69■■■□□ 2.66
PSME3-204ENST00000543428 AHDC1Q5TGY3 1603 aaPredicted RBP31.69■■■□□ 2.66
PSME3-204ENST00000543428 IFT172Q9UG01 1749 aa31.68■■■□□ 2.66
PSME3-204ENST00000543428 ASXL1Q8IXJ9 1541 aa31.65■■■□□ 2.66
PSME3-204ENST00000543428 PRAG1Q86YV5 1406 aa31.63■■■□□ 2.65
PSME3-204ENST00000543428 RGS17Q9UGC6 210 aaPredicted RBP31.62■■■□□ 2.65
PSME3-204ENST00000543428 STK26Q9P289 416 aa31.61■■■□□ 2.65
PSME3-204ENST00000543428 SPATA31A6Q5VVP1 1343 aa31.59■■■□□ 2.65
PSME3-204ENST00000543428 PIK3C2GO75747 1445 aa31.58■■■□□ 2.65
PSME3-204ENST00000543428 SHPRHQ149N8 1683 aa31.55■■■□□ 2.64
PSME3-204ENST00000543428 C1orf167Q5SNV9 1468 aa31.55■■■□□ 2.64
PSME3-204ENST00000543428 HRCP23327 699 aa31.55■■■□□ 2.64
PSME3-204ENST00000543428 MEX3CQ5U5Q3 659 aaKnown RBP31.55■■■□□ 2.64
PSME3-204ENST00000543428 TMEM132EQ6IEE7 984 aa31.55■■■□□ 2.64
PSME3-204ENST00000543428 NHSL1Q5SYE7 1610 aa31.54■■■□□ 2.64
PSME3-204ENST00000543428 LRPPRCP42704 1394 aaKnown RBP31.54■■■□□ 2.64
PSME3-204ENST00000543428 DDX17Q92841 729 aaKnown RBP31.51■■■□□ 2.63
PSME3-204ENST00000543428 LRRC59Q96AG4 307 aaKnown RBP31.51■■■□□ 2.63
PSME3-204ENST00000543428 MYOM2P54296 1465 aa31.5■■■□□ 2.63
PSME3-204ENST00000543428 TECPR2O15040 1411 aa31.49■■■□□ 2.63
PSME3-204ENST00000543428 ABCC11Q96J66 1382 aa31.49■■■□□ 2.63
PSME3-204ENST00000543428 WAPLQ7Z5K2 1190 aa31.49■■■□□ 2.63
PSME3-204ENST00000543428 NUTM2BA6NNL0 878 aaPredicted RBP31.48■■■□□ 2.63
PSME3-204ENST00000543428 NUTM2EB1AL46 878 aaPredicted RBP31.48■■■□□ 2.63
PSME3-204ENST00000543428 POTEAQ6S8J7 498 aa31.48■■■□□ 2.63
PSME3-204ENST00000543428 NUTM2AQ8IVF1 878 aaPredicted RBP31.48■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms