RNA–Protein interactions for RNA: ENST00000543323.5

MDM2-230, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 427 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-230ENST00000543323 RCCD1A6NED2 376 aa9.99□□□□□ -0.81
MDM2-230ENST00000543323 RSBN1LQ6PCB5 846 aaPredicted RBP9.99□□□□□ -0.81
MDM2-230ENST00000543323 RETREG2Q8NC44 543 aa9.99□□□□□ -0.81
MDM2-230ENST00000543323 SULF1Q8IWU6 871 aa9.98□□□□□ -0.81
MDM2-230ENST00000543323 PRM3Q9NNZ6 103 aa9.98□□□□□ -0.81
MDM2-230ENST00000543323 POTEB2H3BUK9 544 aa9.97□□□□□ -0.81
MDM2-230ENST00000543323 PPP1R15AO75807 674 aaPredicted RBP9.97□□□□□ -0.81
MDM2-230ENST00000543323 GJA5P36382 358 aa9.97□□□□□ -0.81
MDM2-230ENST00000543323 NUTM1Q86Y26 1132 aa9.97□□□□□ -0.81
MDM2-230ENST00000543323 EYA1Q99502 592 aa9.97□□□□□ -0.81
MDM2-230ENST00000543323 FAM198AQ9UFP1 575 aa9.97□□□□□ -0.81
MDM2-230ENST00000543323 AEBP1Q8IUX7 1158 aa9.96□□□□□ -0.82
MDM2-230ENST00000543323 CALR3Q96L12 384 aaKnown RBP9.96□□□□□ -0.82
MDM2-230ENST00000543323 MOXD2PA6NHM9 499 aa9.95□□□□□ -0.82
MDM2-230ENST00000543323 LILRB3O75022 631 aa9.95□□□□□ -0.82
MDM2-230ENST00000543323 NUDT7P0C024 238 aa9.95□□□□□ -0.82
MDM2-230ENST00000543323 ABL2P42684 1182 aa9.95□□□□□ -0.82
MDM2-230ENST00000543323 CSPP1Q1MSJ5 1256 aa9.94□□□□□ -0.82
MDM2-230ENST00000543323 DDX11L8A8MPP1 907 aa9.93□□□□□ -0.82
MDM2-230ENST00000543323 AP1G2O75843 785 aa9.93□□□□□ -0.82
MDM2-230ENST00000543323 HOXB3P14651 431 aaPredicted RBP9.93□□□□□ -0.82
MDM2-230ENST00000543323 QPCTQ16769 361 aa9.93□□□□□ -0.82
MDM2-230ENST00000543323 TBC1D2BQ9UPU7 963 aa9.93□□□□□ -0.82
MDM2-230ENST00000543323 POM121CA8CG34 1229 aa9.92□□□□□ -0.82
MDM2-230ENST00000543323 DNAJB2P25686 324 aa9.92□□□□□ -0.82
MDM2-230ENST00000543323 MAMSTRQ6ZN01 415 aa9.92□□□□□ -0.82
MDM2-230ENST00000543323 GLMNQ92990 594 aa9.92□□□□□ -0.82
MDM2-230ENST00000543323 USP17L8P0C7I0 530 aa9.91□□□□□ -0.82
MDM2-230ENST00000543323 NDUFV2P19404 249 aa9.91□□□□□ -0.82
MDM2-230ENST00000543323 COL9A1P20849 921 aa9.91□□□□□ -0.82
MDM2-230ENST00000543323 DOK7Q18PE1 504 aa9.91□□□□□ -0.82
MDM2-230ENST00000543323 ZNF710Q8N1W2 664 aa9.91□□□□□ -0.82
MDM2-230ENST00000543323 KHSRPQ92945 711 aaKnown RBP eCLIP9.91□□□□□ -0.824e-9■■■□□ 16.2
MDM2-230ENST00000543323 SCUBE2Q9NQ36 999 aa9.91□□□□□ -0.82
MDM2-230ENST00000543323 ACIN1Q9UKV3 1341 aaKnown RBP9.9□□□□□ -0.82
MDM2-230ENST00000543323 IRF5Q13568 498 aa9.9□□□□□ -0.82
MDM2-230ENST00000543323 ARSIQ5FYB1 569 aa9.9□□□□□ -0.82
MDM2-230ENST00000543323 RTL5Q5HYW3 569 aaPredicted RBP9.9□□□□□ -0.82
MDM2-230ENST00000543323 ZSWIM6Q9HCJ5 1215 aa9.9□□□□□ -0.82
MDM2-230ENST00000543323 TSKSQ9UJT2 592 aa9.9□□□□□ -0.82
MDM2-230ENST00000543323 PCDHB15Q9Y5E8 787 aa9.9□□□□□ -0.82
MDM2-230ENST00000543323 NBPF26B4DH59 902 aa9.89□□□□□ -0.83
MDM2-230ENST00000543323 PDE4CQ08493 712 aa9.89□□□□□ -0.83
MDM2-230ENST00000543323 PRPF38BQ5VTL8 546 aaKnown RBP9.89□□□□□ -0.83
MDM2-230ENST00000543323 NUDT18Q6ZVK8 323 aa9.89□□□□□ -0.83
MDM2-230ENST00000543323 TMEM134Q9H6X4 195 aa9.89□□□□□ -0.83
MDM2-230ENST00000543323 NUTM2BA6NNL0 878 aaPredicted RBP9.88□□□□□ -0.83
MDM2-230ENST00000543323 NUTM2EB1AL46 878 aaPredicted RBP9.88□□□□□ -0.83
MDM2-230ENST00000543323 PPP1R3GB7ZBB8 358 aa9.88□□□□□ -0.83
MDM2-230ENST00000543323 NUTM2DQ5VT03 806 aaPredicted RBP9.88□□□□□ -0.83
MDM2-230ENST00000543323 NUTM2AQ8IVF1 878 aaPredicted RBP9.88□□□□□ -0.83
MDM2-230ENST00000543323 BCL2L12Q9HB09 334 aa9.88□□□□□ -0.83
MDM2-230ENST00000543323 C3orf80F5H4A9 247 aa9.87□□□□□ -0.83
MDM2-230ENST00000543323 PPP4R3BQ5MIZ7 849 aa9.87□□□□□ -0.83
MDM2-230ENST00000543323 PNMA3Q9UL41 463 aa9.87□□□□□ -0.83
MDM2-230ENST00000543323 RIMBP2O15034 1052 aa9.86□□□□□ -0.83
MDM2-230ENST00000543323 GPR153Q6NV75 609 aa9.86□□□□□ -0.83
MDM2-230ENST00000543323 CABLES1Q8TDN4 633 aa9.86□□□□□ -0.83
MDM2-230ENST00000543323 TATDN2Q93075 761 aa9.86□□□□□ -0.83
MDM2-230ENST00000543323 NDUFB9Q9Y6M9 179 aa9.86□□□□□ -0.83
MDM2-230ENST00000543323 KDM4AO75164 1064 aa9.85□□□□□ -0.83
MDM2-230ENST00000543323 RDH13Q8NBN7 331 aa9.85□□□□□ -0.83
MDM2-230ENST00000543323 GJD4Q96KN9 370 aaPredicted RBP9.85□□□□□ -0.83
MDM2-230ENST00000543323 ZBTB3Q9H5J0 574 aa9.85□□□□□ -0.83
MDM2-230ENST00000543323 LHX6Q9UPM6 363 aa9.85□□□□□ -0.83
MDM2-230ENST00000543323 PSDA5PKW4 1024 aaPredicted RBP9.84□□□□□ -0.83
MDM2-230ENST00000543323 TRIM6-TRIM34B2RNG4 842 aa9.84□□□□□ -0.83
MDM2-230ENST00000543323 PTPREP23469 700 aa9.84□□□□□ -0.83
MDM2-230ENST00000543323 USP46P62068 366 aa9.84□□□□□ -0.83
MDM2-230ENST00000543323 TMCO4Q5TGY1 634 aa9.84□□□□□ -0.83
MDM2-230ENST00000543323 PACS2Q86VP3 889 aa9.84□□□□□ -0.83
MDM2-230ENST00000543323 WASHC4Q2M389 1173 aa9.83□□□□□ -0.84
MDM2-230ENST00000543323 PBXIP1Q96AQ6 731 aa9.83□□□□□ -0.84
MDM2-230ENST00000543323 GZF1Q9H116 711 aaPredicted RBP9.83□□□□□ -0.84
MDM2-230ENST00000543323 HDGFL1Q5TGJ6 251 aa9.82□□□□□ -0.84
MDM2-230ENST00000543323 HOXA2O43364 376 aa9.81□□□□□ -0.84
MDM2-230ENST00000543323 FDX1P10109 184 aa9.81□□□□□ -0.84
MDM2-230ENST00000543323 ADAMTS19Q8TE59 1207 aa9.81□□□□□ -0.84
MDM2-230ENST00000543323 PATL2C9JE40 543 aaKnown RBP9.8□□□□□ -0.84
MDM2-230ENST00000543323 GCGRP47871 477 aa9.8□□□□□ -0.84
MDM2-230ENST00000543323 RSPH4AQ5TD94 716 aa9.79□□□□□ -0.84
MDM2-230ENST00000543323 RGS22Q8NE09 1264 aa9.79□□□□□ -0.84
MDM2-230ENST00000543323 USTQ9Y2C2 406 aa9.79□□□□□ -0.84
MDM2-230ENST00000543323 SMAPO00193 183 aa9.78□□□□□ -0.84
MDM2-230ENST00000543323 GPR37L1O60883 481 aa9.78□□□□□ -0.84
MDM2-230ENST00000543323 MFAP1P55081 439 aaKnown RBP9.78□□□□□ -0.84
MDM2-230ENST00000543323 CFAP70Q5T0N1 1121 aa9.78□□□□□ -0.84
MDM2-230ENST00000543323 TRIM34Q9BYJ4 488 aa9.78□□□□□ -0.84
MDM2-230ENST00000543323 HMX1Q9NP08 348 aaPredicted RBP9.78□□□□□ -0.84
MDM2-230ENST00000543323 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.77□□□□□ -0.85
MDM2-230ENST00000543323 SNPHO15079 494 aa9.77□□□□□ -0.85
MDM2-230ENST00000543323 CTDSPL2Q05D32 466 aa9.77□□□□□ -0.85
MDM2-230ENST00000543323 PCDHGC3Q9UN70 934 aa9.77□□□□□ -0.85
MDM2-230ENST00000543323 RFX1P22670 979 aa9.76□□□□□ -0.85
MDM2-230ENST00000543323 SRPK2P78362 688 aaKnown RBP9.76□□□□□ -0.85
MDM2-230ENST00000543323 HELBQ8NG08 1087 aaPredicted RBP9.76□□□□□ -0.85
MDM2-230ENST00000543323 BRD1O95696 1058 aa9.75□□□□□ -0.85
MDM2-230ENST00000543323 CSB-PGBD3P0DP91 1061 aa9.75□□□□□ -0.85
MDM2-230ENST00000543323 KCNA1Q09470 495 aa9.75□□□□□ -0.85
MDM2-230ENST00000543323 MTMR2Q13614 643 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms