RNA–Protein interactions for RNA: ENST00000543115.5

PTPN6-220, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 4

Gene PTPN6, Length 650 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-220ENST00000543115 NUP155O75694 1391 aa18.46■□□□□ 0.55
PTPN6-220ENST00000543115 XIRP1Q702N8 1843 aaKnown RBP18.46■□□□□ 0.55
PTPN6-220ENST00000543115 RIMS2Q9UQ26 1411 aa18.44■□□□□ 0.54
PTPN6-220ENST00000543115 KCNA6P17658 529 aa18.44■□□□□ 0.54
PTPN6-220ENST00000543115 MYO5BQ9ULV0 1848 aa18.44■□□□□ 0.54
PTPN6-220ENST00000543115 TMEM94Q12767 1356 aa18.43■□□□□ 0.54
PTPN6-220ENST00000543115 RBM33Q96EV2 1170 aaKnown RBP18.43■□□□□ 0.54
PTPN6-220ENST00000543115 RRBP1Q9P2E9 1410 aaKnown RBP18.42■□□□□ 0.54
PTPN6-220ENST00000543115 CHGAP10645 457 aaKnown RBP18.42■□□□□ 0.54
PTPN6-220ENST00000543115 MED1Q15648 1581 aaPredicted RBP18.42■□□□□ 0.54
PTPN6-220ENST00000543115 PLEKHG1Q9ULL1 1385 aa18.42■□□□□ 0.54
PTPN6-220ENST00000543115 BCANQ96GW7 911 aa18.41■□□□□ 0.54
PTPN6-220ENST00000543115 NWD1Q149M9 1564 aa18.41■□□□□ 0.54
PTPN6-220ENST00000543115 PPP1R15AO75807 674 aaPredicted RBP18.39■□□□□ 0.53
PTPN6-220ENST00000543115 NUTM2DQ5VT03 806 aaPredicted RBP18.39■□□□□ 0.53
PTPN6-220ENST00000543115 PROSER2Q86WR7 435 aaPredicted RBP18.39■□□□□ 0.53
PTPN6-220ENST00000543115 NKTRP30414 1462 aaKnown RBP18.38■□□□□ 0.53
PTPN6-220ENST00000543115 HDGFP51858 240 aaKnown RBP18.37■□□□□ 0.53
PTPN6-220ENST00000543115 NAIPQ13075 1403 aa18.35■□□□□ 0.53
PTPN6-220ENST00000543115 ADAMTS13Q76LX8 1427 aa18.35■□□□□ 0.53
PTPN6-220ENST00000543115 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.35■□□□□ 0.53
PTPN6-220ENST00000543115 TBX22Q9Y458 520 aa18.34■□□□□ 0.53
PTPN6-220ENST00000543115 FAM135BQ49AJ0 1406 aa18.33■□□□□ 0.53
PTPN6-220ENST00000543115 CHD2O14647 1828 aaKnown RBP18.32■□□□□ 0.52
PTPN6-220ENST00000543115 SPHKAPQ2M3C7 1700 aa18.31■□□□□ 0.52
PTPN6-220ENST00000543115 MSH6P52701 1360 aa18.3■□□□□ 0.52
PTPN6-220ENST00000543115 DIP2AQ14689 1571 aa18.29■□□□□ 0.52
PTPN6-220ENST00000543115 ROBO1Q9Y6N7 1651 aa18.28■□□□□ 0.52
PTPN6-220ENST00000543115 CLTCL1P53675 1640 aa18.27■□□□□ 0.51
PTPN6-220ENST00000543115 HFM1A2PYH4 1435 aa18.26■□□□□ 0.51
PTPN6-220ENST00000543115 PTPRUQ92729 1446 aa18.26■□□□□ 0.51
PTPN6-220ENST00000543115 PIK3R4Q99570 1358 aa18.26■□□□□ 0.51
PTPN6-220ENST00000543115 TRPM2O94759 1503 aa18.25■□□□□ 0.51
PTPN6-220ENST00000543115 NRXN3Q9Y4C0 1643 aa18.25■□□□□ 0.51
PTPN6-220ENST00000543115 PHF23Q9BUL5 403 aaPredicted RBP18.25■□□□□ 0.51
PTPN6-220ENST00000543115 ZNF326Q5BKZ1 582 aaKnown RBP18.24■□□□□ 0.51
PTPN6-220ENST00000543115 SLAIN2Q9P270 581 aa18.24■□□□□ 0.51
PTPN6-220ENST00000543115 NCOA3Q9Y6Q9 1424 aa18.23■□□□□ 0.51
PTPN6-220ENST00000543115 SETBP1Q9Y6X0 1596 aa18.23■□□□□ 0.51
PTPN6-220ENST00000543115 AMOTL2Q9Y2J4 779 aa18.23■□□□□ 0.51
PTPN6-220ENST00000543115 TRIM52Q96A61 297 aa18.22■□□□□ 0.51
PTPN6-220ENST00000543115 NEXMIFQ5QGS0 1516 aa18.21■□□□□ 0.51
PTPN6-220ENST00000543115 C14orf37Q86TY3 774 aa18.2■□□□□ 0.5
PTPN6-220ENST00000543115 METP08581 1390 aa18.19■□□□□ 0.5
PTPN6-220ENST00000543115 RGS17Q9UGC6 210 aaPredicted RBP18.19■□□□□ 0.5
PTPN6-220ENST00000543115 XRN1Q8IZH2 1706 aaKnown RBP18.18■□□□□ 0.5
PTPN6-220ENST00000543115 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.18■□□□□ 0.5
PTPN6-220ENST00000543115 C19orf44Q9H6X5 657 aa18.18■□□□□ 0.5
PTPN6-220ENST00000543115 SLC4A1APQ9BWU0 796 aaKnown RBP18.17■□□□□ 0.5
PTPN6-220ENST00000543115 PHLPP1O60346 1717 aa18.15■□□□□ 0.5
PTPN6-220ENST00000543115 CADPS2Q86UW7 1296 aa18.15■□□□□ 0.5
PTPN6-220ENST00000543115 ATF3P18847 181 aa18.14■□□□□ 0.49
PTPN6-220ENST00000543115 FOXD1Q16676 465 aa18.14■□□□□ 0.49
PTPN6-220ENST00000543115 KIF1BO60333 1816 aa18.14■□□□□ 0.49
PTPN6-220ENST00000543115 COL16A1Q07092 1604 aaPredicted RBP18.13■□□□□ 0.49
PTPN6-220ENST00000543115 JCADQ9P266 1359 aa18.11■□□□□ 0.49
PTPN6-220ENST00000543115 DCCP43146 1447 aa18.1■□□□□ 0.49
PTPN6-220ENST00000543115 BRINP3Q76B58 766 aa18.1■□□□□ 0.49
PTPN6-220ENST00000543115 AHDC1Q5TGY3 1603 aaPredicted RBP18.09■□□□□ 0.49
PTPN6-220ENST00000543115 MST1RQ04912 1400 aa18.08■□□□□ 0.49
PTPN6-220ENST00000543115 VGFO15240 615 aaPredicted RBP18.08■□□□□ 0.48
PTPN6-220ENST00000543115 POTEAQ6S8J7 498 aa18.08■□□□□ 0.48
PTPN6-220ENST00000543115 SETD1AO15047 1707 aaKnown RBP18.08■□□□□ 0.48
PTPN6-220ENST00000543115 ADGRL3Q9HAR2 1447 aa18.06■□□□□ 0.48
PTPN6-220ENST00000543115 RPGRIP1LQ68CZ1 1315 aa18.06■□□□□ 0.48
PTPN6-220ENST00000543115 LRP6O75581 1613 aa18.05■□□□□ 0.48
PTPN6-220ENST00000543115 ASXL1Q8IXJ9 1541 aa18.05■□□□□ 0.48
PTPN6-220ENST00000543115 MPHOSPH9Q99550 1183 aa18.05■□□□□ 0.48
PTPN6-220ENST00000543115 NALCNQ8IZF0 1738 aa18.05■□□□□ 0.48
PTPN6-220ENST00000543115 ROBO2Q9HCK4 1378 aa18.04■□□□□ 0.48
PTPN6-220ENST00000543115 PPLO60437 1756 aa18.04■□□□□ 0.48
PTPN6-220ENST00000543115 CCDC144AA2RUR9 1427 aa18.03■□□□□ 0.48
PTPN6-220ENST00000543115 PTCH1Q13635 1447 aa18.03■□□□□ 0.48
PTPN6-220ENST00000543115 SPATA31E1Q6ZUB1 1445 aa18.02■□□□□ 0.48
PTPN6-220ENST00000543115 SPATA31A6Q5VVP1 1343 aa18.01■□□□□ 0.47
PTPN6-220ENST00000543115 ADGRF5Q8IZF2 1346 aa18.01■□□□□ 0.47
PTPN6-220ENST00000543115 PRAG1Q86YV5 1406 aa18.01■□□□□ 0.47
PTPN6-220ENST00000543115 RGL3Q3MIN7 710 aa18.01■□□□□ 0.47
PTPN6-220ENST00000543115 SHPRHQ149N8 1683 aa18■□□□□ 0.47
PTPN6-220ENST00000543115 DDX17Q92841 729 aaKnown RBP18■□□□□ 0.47
PTPN6-220ENST00000543115 NHSL1Q5SYE7 1610 aa17.99■□□□□ 0.47
PTPN6-220ENST00000543115 SETD5Q9C0A6 1442 aa17.98■□□□□ 0.47
PTPN6-220ENST00000543115 C1orf167Q5SNV9 1468 aa17.98■□□□□ 0.47
PTPN6-220ENST00000543115 IFT172Q9UG01 1749 aa17.95■□□□□ 0.46
PTPN6-220ENST00000543115 MEX3CQ5U5Q3 659 aaKnown RBP17.95■□□□□ 0.46
PTPN6-220ENST00000543115 ANKRD30BQ9BXX2 1392 aa17.94■□□□□ 0.46
PTPN6-220ENST00000543115 NUTM2BA6NNL0 878 aaPredicted RBP17.94■□□□□ 0.46
PTPN6-220ENST00000543115 NUTM2EB1AL46 878 aaPredicted RBP17.94■□□□□ 0.46
PTPN6-220ENST00000543115 NUTM2AQ8IVF1 878 aaPredicted RBP17.94■□□□□ 0.46
PTPN6-220ENST00000543115 ORAI2Q96SN7 254 aa17.94■□□□□ 0.46
PTPN6-220ENST00000543115 RAB3GAP2Q9H2M9 1393 aa17.93■□□□□ 0.46
PTPN6-220ENST00000543115 PIK3C2GO75747 1445 aa17.92■□□□□ 0.46
PTPN6-220ENST00000543115 TMEM132EQ6IEE7 984 aa17.92■□□□□ 0.46
PTPN6-220ENST00000543115 LRRC59Q96AG4 307 aaKnown RBP17.92■□□□□ 0.46
PTPN6-220ENST00000543115 PNPLA6Q8IY17 1366 aa17.91■□□□□ 0.46
PTPN6-220ENST00000543115 STK26Q9P289 416 aa17.91■□□□□ 0.46
PTPN6-220ENST00000543115 TECPR2O15040 1411 aa17.9■□□□□ 0.46
PTPN6-220ENST00000543115 LAMC1P11047 1609 aa17.9■□□□□ 0.46
PTPN6-220ENST00000543115 LRPPRCP42704 1394 aaKnown RBP17.9■□□□□ 0.46
PTPN6-220ENST00000543115 ZNF772Q68DY9 489 aaPredicted RBP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms