RNA–Protein interactions for RNA: ENST00000543114.1

CACNA1C-230, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 4

Gene CACNA1C, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-230ENST00000543114 SLC26A8Q96RN1 970 aa30.21■■■□□ 2.43
CACNA1C-230ENST00000543114 SENP3Q9H4L4 574 aaPredicted RBP30.18■■■□□ 2.42
CACNA1C-230ENST00000543114 TMEM94Q12767 1356 aa30.17■■■□□ 2.42
CACNA1C-230ENST00000543114 PPARGC1BQ86YN6 1023 aaKnown RBP30.17■■■□□ 2.42
CACNA1C-230ENST00000543114 RIMS2Q9UQ26 1411 aa30.16■■■□□ 2.42
CACNA1C-230ENST00000543114 NKTRP30414 1462 aaKnown RBP30.16■■■□□ 2.42
CACNA1C-230ENST00000543114 KCNA6P17658 529 aa30.15■■■□□ 2.42
CACNA1C-230ENST00000543114 ITGAEP38570 1179 aa30.14■■■□□ 2.42
CACNA1C-230ENST00000543114 PLEKHG1Q9ULL1 1385 aa30.14■■■□□ 2.41
CACNA1C-230ENST00000543114 CHD2O14647 1828 aaKnown RBP30.1■■■□□ 2.41
CACNA1C-230ENST00000543114 NUP155O75694 1391 aa30.09■■■□□ 2.41
CACNA1C-230ENST00000543114 RBM33Q96EV2 1170 aaKnown RBP30.08■■■□□ 2.41
CACNA1C-230ENST00000543114 BCANQ96GW7 911 aa30.08■■■□□ 2.41
CACNA1C-230ENST00000543114 PPP1R15AO75807 674 aaPredicted RBP30.07■■■□□ 2.4
CACNA1C-230ENST00000543114 ROBO1Q9Y6N7 1651 aa30.06■■■□□ 2.4
CACNA1C-230ENST00000543114 PROSER2Q86WR7 435 aaPredicted RBP30.05■■■□□ 2.4
CACNA1C-230ENST00000543114 SPHKAPQ2M3C7 1700 aa30.05■■■□□ 2.4
CACNA1C-230ENST00000543114 FAM135BQ49AJ0 1406 aa30.05■■■□□ 2.4
CACNA1C-230ENST00000543114 CHGAP10645 457 aaKnown RBP30.04■■■□□ 2.4
CACNA1C-230ENST00000543114 ADAMTS13Q76LX8 1427 aa30.01■■■□□ 2.39
CACNA1C-230ENST00000543114 DIP2AQ14689 1571 aa30.01■■■□□ 2.39
CACNA1C-230ENST00000543114 RRBP1Q9P2E9 1410 aaKnown RBP30■■■□□ 2.39
CACNA1C-230ENST00000543114 HDGFP51858 240 aaKnown RBP30■■■□□ 2.39
CACNA1C-230ENST00000543114 NUTM2DQ5VT03 806 aaPredicted RBP29.98■■■□□ 2.39
CACNA1C-230ENST00000543114 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.98■■■□□ 2.39
CACNA1C-230ENST00000543114 PHF23Q9BUL5 403 aaPredicted RBP29.98■■■□□ 2.39
CACNA1C-230ENST00000543114 MSH6P52701 1360 aa29.97■■■□□ 2.39
CACNA1C-230ENST00000543114 TBX22Q9Y458 520 aa29.95■■■□□ 2.39
CACNA1C-230ENST00000543114 NRXN3Q9Y4C0 1643 aa29.92■■■□□ 2.38
CACNA1C-230ENST00000543114 TRPM2O94759 1503 aa29.91■■■□□ 2.38
CACNA1C-230ENST00000543114 NAIPQ13075 1403 aa29.9■■■□□ 2.38
CACNA1C-230ENST00000543114 CLTCL1P53675 1640 aa29.89■■■□□ 2.38
CACNA1C-230ENST00000543114 PIK3R4Q99570 1358 aa29.89■■■□□ 2.37
CACNA1C-230ENST00000543114 PHLPP1O60346 1717 aa29.87■■■□□ 2.37
CACNA1C-230ENST00000543114 NCOA3Q9Y6Q9 1424 aa29.87■■■□□ 2.37
CACNA1C-230ENST00000543114 SETBP1Q9Y6X0 1596 aa29.86■■■□□ 2.37
CACNA1C-230ENST00000543114 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.85■■■□□ 2.37
CACNA1C-230ENST00000543114 PTPRUQ92729 1446 aa29.85■■■□□ 2.37
CACNA1C-230ENST00000543114 XRN1Q8IZH2 1706 aaKnown RBP29.84■■■□□ 2.37
CACNA1C-230ENST00000543114 SLAIN2Q9P270 581 aa29.83■■■□□ 2.37
CACNA1C-230ENST00000543114 NEXMIFQ5QGS0 1516 aa29.81■■■□□ 2.36
CACNA1C-230ENST00000543114 RGS17Q9UGC6 210 aaPredicted RBP29.8■■■□□ 2.36
CACNA1C-230ENST00000543114 COL16A1Q07092 1604 aaPredicted RBP29.8■■■□□ 2.36
CACNA1C-230ENST00000543114 KIF1BO60333 1816 aa29.8■■■□□ 2.36
CACNA1C-230ENST00000543114 HFM1A2PYH4 1435 aa29.79■■■□□ 2.36
CACNA1C-230ENST00000543114 C14orf37Q86TY3 774 aa29.78■■■□□ 2.36
CACNA1C-230ENST00000543114 ZNF326Q5BKZ1 582 aaKnown RBP29.77■■■□□ 2.36
CACNA1C-230ENST00000543114 AMOTL2Q9Y2J4 779 aa29.76■■■□□ 2.35
CACNA1C-230ENST00000543114 C19orf44Q9H6X5 657 aa29.72■■■□□ 2.35
CACNA1C-230ENST00000543114 METP08581 1390 aa29.72■■■□□ 2.35
CACNA1C-230ENST00000543114 AHDC1Q5TGY3 1603 aaPredicted RBP29.71■■■□□ 2.35
CACNA1C-230ENST00000543114 CADPS2Q86UW7 1296 aa29.71■■■□□ 2.35
CACNA1C-230ENST00000543114 JCADQ9P266 1359 aa29.7■■■□□ 2.35
CACNA1C-230ENST00000543114 ATF3P18847 181 aa29.68■■■□□ 2.34
CACNA1C-230ENST00000543114 DCCP43146 1447 aa29.68■■■□□ 2.34
CACNA1C-230ENST00000543114 SETD1AO15047 1707 aaKnown RBP29.67■■■□□ 2.34
CACNA1C-230ENST00000543114 TRIM52Q96A61 297 aa29.65■■■□□ 2.34
CACNA1C-230ENST00000543114 NALCNQ8IZF0 1738 aa29.65■■■□□ 2.34
CACNA1C-230ENST00000543114 SHPRHQ149N8 1683 aa29.63■■■□□ 2.33
CACNA1C-230ENST00000543114 POTEAQ6S8J7 498 aa29.62■■■□□ 2.33
CACNA1C-230ENST00000543114 LRP6O75581 1613 aa29.61■■■□□ 2.33
CACNA1C-230ENST00000543114 ASXL1Q8IXJ9 1541 aa29.61■■■□□ 2.33
CACNA1C-230ENST00000543114 PPLO60437 1756 aa29.6■■■□□ 2.33
CACNA1C-230ENST00000543114 MST1RQ04912 1400 aa29.6■■■□□ 2.33
CACNA1C-230ENST00000543114 BRINP3Q76B58 766 aa29.59■■■□□ 2.33
CACNA1C-230ENST00000543114 SLC4A1APQ9BWU0 796 aaKnown RBP29.59■■■□□ 2.33
CACNA1C-230ENST00000543114 ADGRL3Q9HAR2 1447 aa29.59■■■□□ 2.33
CACNA1C-230ENST00000543114 NHSL1Q5SYE7 1610 aa29.57■■■□□ 2.32
CACNA1C-230ENST00000543114 PTCH1Q13635 1447 aa29.54■■■□□ 2.32
CACNA1C-230ENST00000543114 SPATA31A6Q5VVP1 1343 aa29.53■■■□□ 2.32
CACNA1C-230ENST00000543114 VGFO15240 615 aaPredicted RBP29.5■■■□□ 2.31
CACNA1C-230ENST00000543114 FOXD1Q16676 465 aa29.5■■■□□ 2.31
CACNA1C-230ENST00000543114 PRAG1Q86YV5 1406 aa29.49■■■□□ 2.31
CACNA1C-230ENST00000543114 RPGRIP1LQ68CZ1 1315 aa29.47■■■□□ 2.31
CACNA1C-230ENST00000543114 ROBO2Q9HCK4 1378 aa29.47■■■□□ 2.31
CACNA1C-230ENST00000543114 SETD5Q9C0A6 1442 aa29.46■■■□□ 2.31
CACNA1C-230ENST00000543114 IFT172Q9UG01 1749 aa29.45■■■□□ 2.31
CACNA1C-230ENST00000543114 CCDC144AA2RUR9 1427 aa29.44■■■□□ 2.3
CACNA1C-230ENST00000543114 MEX3CQ5U5Q3 659 aaKnown RBP29.43■■■□□ 2.3
CACNA1C-230ENST00000543114 C1orf167Q5SNV9 1468 aa29.42■■■□□ 2.3
CACNA1C-230ENST00000543114 SPATA31E1Q6ZUB1 1445 aa29.41■■■□□ 2.3
CACNA1C-230ENST00000543114 DDX17Q92841 729 aaKnown RBP29.4■■■□□ 2.3
CACNA1C-230ENST00000543114 LAMC1P11047 1609 aa29.4■■■□□ 2.3
CACNA1C-230ENST00000543114 MPHOSPH9Q99550 1183 aa29.36■■■□□ 2.29
CACNA1C-230ENST00000543114 NUTM2BA6NNL0 878 aaPredicted RBP29.35■■■□□ 2.29
CACNA1C-230ENST00000543114 NUTM2EB1AL46 878 aaPredicted RBP29.35■■■□□ 2.29
CACNA1C-230ENST00000543114 NUTM2AQ8IVF1 878 aaPredicted RBP29.35■■■□□ 2.29
CACNA1C-230ENST00000543114 ADGRF5Q8IZF2 1346 aa29.35■■■□□ 2.29
CACNA1C-230ENST00000543114 PNPLA6Q8IY17 1366 aa29.35■■■□□ 2.29
CACNA1C-230ENST00000543114 CDC42BPGQ6DT37 1551 aa29.34■■■□□ 2.29
CACNA1C-230ENST00000543114 ZNF772Q68DY9 489 aaPredicted RBP29.33■■■□□ 2.29
CACNA1C-230ENST00000543114 LRRC59Q96AG4 307 aaKnown RBP29.32■■■□□ 2.28
CACNA1C-230ENST00000543114 RGL3Q3MIN7 710 aa29.31■■■□□ 2.28
CACNA1C-230ENST00000543114 KNDC1Q76NI1 1749 aa29.31■■■□□ 2.28
CACNA1C-230ENST00000543114 ANKRD30BQ9BXX2 1392 aa29.3■■■□□ 2.28
CACNA1C-230ENST00000543114 TECPR2O15040 1411 aa29.28■■■□□ 2.28
CACNA1C-230ENST00000543114 PIK3C2GO75747 1445 aa29.28■■■□□ 2.28
CACNA1C-230ENST00000543114 ORAI2Q96SN7 254 aa29.28■■■□□ 2.28
CACNA1C-230ENST00000543114 AFF2P51816 1311 aa29.24■■■□□ 2.27
CACNA1C-230ENST00000543114 SOS2Q07890 1332 aaPredicted RBP29.23■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms