RNA–Protein interactions for RNA: ENST00000543093.1

CSF1R-209, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 1 (best) BASIC

Gene CSF1R, Length 921 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-209ENST00000543093 NWD1Q149M9 1564 aa23.93■■□□□ 1.42
CSF1R-209ENST00000543093 PROSER2Q86WR7 435 aaPredicted RBP23.92■■□□□ 1.42
CSF1R-209ENST00000543093 RBM33Q96EV2 1170 aaKnown RBP23.91■■□□□ 1.42
CSF1R-209ENST00000543093 NKTRP30414 1462 aaKnown RBP23.9■■□□□ 1.42
CSF1R-209ENST00000543093 TMEM131LA2VDJ0 1609 aa23.9■■□□□ 1.42
CSF1R-209ENST00000543093 FAM135BQ49AJ0 1406 aa23.9■■□□□ 1.42
CSF1R-209ENST00000543093 ZFYVE9O95405 1425 aa23.89■■□□□ 1.41
CSF1R-209ENST00000543093 ROBO1Q9Y6N7 1651 aa23.89■■□□□ 1.41
CSF1R-209ENST00000543093 E9PCH4 1651 aa23.88■■□□□ 1.41
CSF1R-209ENST00000543093 RIMS2Q9UQ26 1411 aa23.87■■□□□ 1.41
CSF1R-209ENST00000543093 PLEKHG1Q9ULL1 1385 aa23.86■■□□□ 1.41
CSF1R-209ENST00000543093 CHD2O14647 1828 aaKnown RBP23.86■■□□□ 1.41
CSF1R-209ENST00000543093 PPP1R15AO75807 674 aaPredicted RBP23.85■■□□□ 1.41
CSF1R-209ENST00000543093 IQGAP3Q86VI3 1631 aa23.84■■□□□ 1.41
CSF1R-209ENST00000543093 ROCK1Q13464 1354 aa23.83■■□□□ 1.41
CSF1R-209ENST00000543093 HDGFP51858 240 aaKnown RBP23.83■■□□□ 1.41
CSF1R-209ENST00000543093 CHGAP10645 457 aaKnown RBP23.82■■□□□ 1.4
CSF1R-209ENST00000543093 MSH6P52701 1360 aa23.81■■□□□ 1.4
CSF1R-209ENST00000543093 RGS17Q9UGC6 210 aaPredicted RBP23.79■■□□□ 1.4
CSF1R-209ENST00000543093 ITGAEP38570 1179 aa23.77■■□□□ 1.4
CSF1R-209ENST00000543093 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.77■■□□□ 1.4
CSF1R-209ENST00000543093 NUTM2DQ5VT03 806 aaPredicted RBP23.76■■□□□ 1.39
CSF1R-209ENST00000543093 TBX22Q9Y458 520 aa23.76■■□□□ 1.39
CSF1R-209ENST00000543093 PHLPP1O60346 1717 aa23.76■■□□□ 1.39
CSF1R-209ENST00000543093 NUP155O75694 1391 aa23.75■■□□□ 1.39
CSF1R-209ENST00000543093 SLAIN2Q9P270 581 aa23.74■■□□□ 1.39
CSF1R-209ENST00000543093 ADAMTS13Q76LX8 1427 aa23.74■■□□□ 1.39
CSF1R-209ENST00000543093 DIP2AQ14689 1571 aa23.74■■□□□ 1.39
CSF1R-209ENST00000543093 PPARGC1BQ86YN6 1023 aaKnown RBP23.72■■□□□ 1.39
CSF1R-209ENST00000543093 C14orf37Q86TY3 774 aa23.69■■□□□ 1.38
CSF1R-209ENST00000543093 NCOA3Q9Y6Q9 1424 aa23.68■■□□□ 1.38
CSF1R-209ENST00000543093 SPHKAPQ2M3C7 1700 aa23.68■■□□□ 1.38
CSF1R-209ENST00000543093 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.67■■□□□ 1.38
CSF1R-209ENST00000543093 PIK3R4Q99570 1358 aa23.67■■□□□ 1.38
CSF1R-209ENST00000543093 TRPM2O94759 1503 aa23.67■■□□□ 1.38
CSF1R-209ENST00000543093 COL16A1Q07092 1604 aaPredicted RBP23.66■■□□□ 1.38
CSF1R-209ENST00000543093 POTEAQ6S8J7 498 aa23.65■■□□□ 1.38
CSF1R-209ENST00000543093 JCADQ9P266 1359 aa23.65■■□□□ 1.38
CSF1R-209ENST00000543093 PTPRUQ92729 1446 aa23.62■■□□□ 1.37
CSF1R-209ENST00000543093 NRXN3Q9Y4C0 1643 aa23.62■■□□□ 1.37
CSF1R-209ENST00000543093 C19orf44Q9H6X5 657 aa23.61■■□□□ 1.37
CSF1R-209ENST00000543093 AMOTL2Q9Y2J4 779 aa23.61■■□□□ 1.37
CSF1R-209ENST00000543093 ATF3P18847 181 aa23.6■■□□□ 1.37
CSF1R-209ENST00000543093 CADPS2Q86UW7 1296 aa23.6■■□□□ 1.37
CSF1R-209ENST00000543093 SETBP1Q9Y6X0 1596 aa23.59■■□□□ 1.37
CSF1R-209ENST00000543093 XRN1Q8IZH2 1706 aaKnown RBP23.58■■□□□ 1.37
CSF1R-209ENST00000543093 AHDC1Q5TGY3 1603 aaPredicted RBP23.58■■□□□ 1.36
CSF1R-209ENST00000543093 ZNF326Q5BKZ1 582 aaKnown RBP23.57■■□□□ 1.36
CSF1R-209ENST00000543093 CLTCL1P53675 1640 aa23.55■■□□□ 1.36
CSF1R-209ENST00000543093 SHPRHQ149N8 1683 aa23.54■■□□□ 1.36
CSF1R-209ENST00000543093 LRP6O75581 1613 aa23.53■■□□□ 1.36
CSF1R-209ENST00000543093 SETD1AO15047 1707 aaKnown RBP23.53■■□□□ 1.36
CSF1R-209ENST00000543093 SPATA31A6Q5VVP1 1343 aa23.52■■□□□ 1.36
CSF1R-209ENST00000543093 KIF1BO60333 1816 aa23.52■■□□□ 1.36
CSF1R-209ENST00000543093 RRBP1Q9P2E9 1410 aaKnown RBP23.51■■□□□ 1.35
CSF1R-209ENST00000543093 NEXMIFQ5QGS0 1516 aa23.51■■□□□ 1.35
CSF1R-209ENST00000543093 DCCP43146 1447 aa23.5■■□□□ 1.35
CSF1R-209ENST00000543093 BRINP3Q76B58 766 aa23.5■■□□□ 1.35
CSF1R-209ENST00000543093 METP08581 1390 aa23.5■■□□□ 1.35
CSF1R-209ENST00000543093 NAIPQ13075 1403 aa23.5■■□□□ 1.35
CSF1R-209ENST00000543093 MEX3CQ5U5Q3 659 aaKnown RBP23.49■■□□□ 1.35
CSF1R-209ENST00000543093 ASXL1Q8IXJ9 1541 aa23.48■■□□□ 1.35
CSF1R-209ENST00000543093 MST1RQ04912 1400 aa23.46■■□□□ 1.35
CSF1R-209ENST00000543093 NALCNQ8IZF0 1738 aa23.45■■□□□ 1.34
CSF1R-209ENST00000543093 NHSL1Q5SYE7 1610 aa23.44■■□□□ 1.34
CSF1R-209ENST00000543093 ADGRL3Q9HAR2 1447 aa23.42■■□□□ 1.34
CSF1R-209ENST00000543093 ZNF772Q68DY9 489 aaPredicted RBP23.41■■□□□ 1.34
CSF1R-209ENST00000543093 TRIM52Q96A61 297 aa23.41■■□□□ 1.34
CSF1R-209ENST00000543093 NUTM2BA6NNL0 878 aaPredicted RBP23.4■■□□□ 1.34
CSF1R-209ENST00000543093 NUTM2EB1AL46 878 aaPredicted RBP23.4■■□□□ 1.34
CSF1R-209ENST00000543093 NUTM2AQ8IVF1 878 aaPredicted RBP23.4■■□□□ 1.34
CSF1R-209ENST00000543093 SETD5Q9C0A6 1442 aa23.39■■□□□ 1.33
CSF1R-209ENST00000543093 HFM1A2PYH4 1435 aa23.38■■□□□ 1.33
CSF1R-209ENST00000543093 DDX17Q92841 729 aaKnown RBP23.35■■□□□ 1.33
CSF1R-209ENST00000543093 PPLO60437 1756 aa23.35■■□□□ 1.33
CSF1R-209ENST00000543093 VGFO15240 615 aaPredicted RBP23.34■■□□□ 1.33
CSF1R-209ENST00000543093 SLC4A1APQ9BWU0 796 aaKnown RBP23.34■■□□□ 1.33
CSF1R-209ENST00000543093 PTCH1Q13635 1447 aa23.33■■□□□ 1.33
CSF1R-209ENST00000543093 LRRC59Q96AG4 307 aaKnown RBP23.33■■□□□ 1.33
CSF1R-209ENST00000543093 ROBO2Q9HCK4 1378 aa23.31■■□□□ 1.32
CSF1R-209ENST00000543093 AFF2P51816 1311 aa23.31■■□□□ 1.32
CSF1R-209ENST00000543093 RPGRIP1LQ68CZ1 1315 aa23.31■■□□□ 1.32
CSF1R-209ENST00000543093 C1orf167Q5SNV9 1468 aa23.3■■□□□ 1.32
CSF1R-209ENST00000543093 RXRBP28702 533 aa23.3■■□□□ 1.32
CSF1R-209ENST00000543093 PNPLA6Q8IY17 1366 aa23.29■■□□□ 1.32
CSF1R-209ENST00000543093 LAMC1P11047 1609 aa23.27■■□□□ 1.32
CSF1R-209ENST00000543093 PRAG1Q86YV5 1406 aa23.26■■□□□ 1.31
CSF1R-209ENST00000543093 FOXD1Q16676 465 aa23.25■■□□□ 1.31
CSF1R-209ENST00000543093 C8orf37Q96NL8 207 aa23.25■■□□□ 1.31
CSF1R-209ENST00000543093 CDK12Q9NYV4 1490 aaPredicted RBP23.24■■□□□ 1.31
CSF1R-209ENST00000543093 UPF1Q92900 1129 aaKnown RBP eCLIP23.24■■□□□ 1.31
CSF1R-209ENST00000543093 ORAI2Q96SN7 254 aa23.24■■□□□ 1.31
CSF1R-209ENST00000543093 SOS2Q07890 1332 aaPredicted RBP23.2■■□□□ 1.3
CSF1R-209ENST00000543093 IFT172Q9UG01 1749 aa23.19■■□□□ 1.3
CSF1R-209ENST00000543093 CCDC144AA2RUR9 1427 aa23.19■■□□□ 1.3
CSF1R-209ENST00000543093 ADAMTS2O95450 1211 aa23.19■■□□□ 1.3
CSF1R-209ENST00000543093 CDC42BPGQ6DT37 1551 aa23.18■■□□□ 1.3
CSF1R-209ENST00000543093 QTRT2Q9H974 415 aaKnown RBP23.18■■□□□ 1.3
CSF1R-209ENST00000543093 ADGRF5Q8IZF2 1346 aa23.17■■□□□ 1.3
CSF1R-209ENST00000543093 NGLY1Q96IV0 654 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms