RNA–Protein interactions for RNA: ENST00000542936.1

PACRG-207, Transcript of parkin coregulated, humanhuman

TSL 3

Gene PACRG, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRG-207ENST00000542936 PPP4CP60510 307 aa10.69□□□□□ -0.7
PACRG-207ENST00000542936 FAM9AQ8IZU1 332 aaPredicted RBP10.69□□□□□ -0.7
PACRG-207ENST00000542936 IRX2Q9BZI1 471 aaPredicted RBP10.69□□□□□ -0.7
PACRG-207ENST00000542936 SWT1Q5T5J6 900 aaKnown RBP10.67□□□□□ -0.7
PACRG-207ENST00000542936 PPARGC1BQ86YN6 1023 aaKnown RBP10.67□□□□□ -0.7
PACRG-207ENST00000542936 EYA1Q99502 592 aa10.65□□□□□ -0.7
PACRG-207ENST00000542936 ADGRG1Q9Y653 693 aa10.64□□□□□ -0.71
PACRG-207ENST00000542936 RBM46Q8TBY0 533 aaKnown RBP10.63□□□□□ -0.71
PACRG-207ENST00000542936 FECHP22830 423 aa10.62□□□□□ -0.71
PACRG-207ENST00000542936 HIC1Q14526 733 aa10.62□□□□□ -0.71
PACRG-207ENST00000542936 WIZO95785 1651 aa10.62□□□□□ -0.71
PACRG-207ENST00000542936 GPIHBP1Q8IV16 184 aa10.61□□□□□ -0.71
PACRG-207ENST00000542936 GPR37O15354 613 aa10.59□□□□□ -0.71
PACRG-207ENST00000542936 DNAJB2P25686 324 aa10.59□□□□□ -0.71
PACRG-207ENST00000542936 SLF2Q8IX21 1173 aa10.59□□□□□ -0.71
PACRG-207ENST00000542936 BAZ1AQ9NRL2 1556 aaPredicted RBP10.59□□□□□ -0.71
PACRG-207ENST00000542936 RCCD1A6NED2 376 aa10.58□□□□□ -0.72
PACRG-207ENST00000542936 GNPATO15228 680 aa10.58□□□□□ -0.72
PACRG-207ENST00000542936 TJAP1Q5JTD0 557 aa10.58□□□□□ -0.72
PACRG-207ENST00000542936 SLC4A3P48751 1232 aa10.57□□□□□ -0.72
PACRG-207ENST00000542936 APLP1P51693 650 aa10.57□□□□□ -0.72
PACRG-207ENST00000542936 TULP1O00294 542 aaPredicted RBP10.56□□□□□ -0.72
PACRG-207ENST00000542936 MTRQ99707 1265 aa10.56□□□□□ -0.72
PACRG-207ENST00000542936 PXYLP1Q8TE99 480 aa10.55□□□□□ -0.72
PACRG-207ENST00000542936 TMEM134Q9H6X4 195 aa10.55□□□□□ -0.72
PACRG-207ENST00000542936 IL21Q9HBE4 155 aa10.55□□□□□ -0.72
PACRG-207ENST00000542936 NECTIN2Q92692 538 aa10.54□□□□□ -0.72
PACRG-207ENST00000542936 OATP04181 439 aa10.53□□□□□ -0.72
PACRG-207ENST00000542936 NLRP7Q8WX94 980 aa10.53□□□□□ -0.72
PACRG-207ENST00000542936 COPS2P61201 443 aa10.52□□□□□ -0.73
PACRG-207ENST00000542936 METTL3Q86U44 580 aaKnown RBP10.52□□□□□ -0.73
PACRG-207ENST00000542936 TOP2AP11388 1531 aaKnown RBP10.52□□□□□ -0.73
PACRG-207ENST00000542936 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.51□□□□□ -0.73
PACRG-207ENST00000542936 ZEB1P37275 1124 aaPredicted RBP10.51□□□□□ -0.73
PACRG-207ENST00000542936 EIF4G1Q04637 1599 aaKnown RBP10.51□□□□□ -0.73
PACRG-207ENST00000542936 CCDC88BA6NC98 1476 aa10.49□□□□□ -0.73
PACRG-207ENST00000542936 ZNF516Q92618 1163 aa10.49□□□□□ -0.73
PACRG-207ENST00000542936 SMARCA4P51532 1647 aa10.48□□□□□ -0.73
PACRG-207ENST00000542936 Q6ZNB5 142 aa10.48□□□□□ -0.73
PACRG-207ENST00000542936 CFHP08603 1231 aa10.47□□□□□ -0.73
PACRG-207ENST00000542936 PPP1R18Q6NYC8 613 aa10.47□□□□□ -0.73
PACRG-207ENST00000542936 SLC10A3P09131 477 aa10.46□□□□□ -0.73
PACRG-207ENST00000542936 PCDHB3Q9Y5E6 796 aa10.46□□□□□ -0.73
PACRG-207ENST00000542936 LAPTM4AQ15012 233 aa10.45□□□□□ -0.74
PACRG-207ENST00000542936 PRKD2Q9BZL6 878 aa10.45□□□□□ -0.74
PACRG-207ENST00000542936 KMT5BQ4FZB7 885 aa10.44□□□□□ -0.74
PACRG-207ENST00000542936 BLOC1S3Q6QNY0 202 aa10.44□□□□□ -0.74
PACRG-207ENST00000542936 NKX2-3Q8TAU0 364 aa10.44□□□□□ -0.74
PACRG-207ENST00000542936 PHOX2BQ99453 314 aa10.44□□□□□ -0.74
PACRG-207ENST00000542936 PRR14Q9BWN1 585 aa10.44□□□□□ -0.74
PACRG-207ENST00000542936 SMARCA2P51531 1590 aa10.43□□□□□ -0.74
PACRG-207ENST00000542936 LMOD2Q6P5Q4 547 aa10.43□□□□□ -0.74
PACRG-207ENST00000542936 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.43□□□□□ -0.74
PACRG-207ENST00000542936 RDH13Q8NBN7 331 aa10.43□□□□□ -0.74
PACRG-207ENST00000542936 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.43□□□□□ -0.74
PACRG-207ENST00000542936 DDX11L8A8MPP1 907 aa10.42□□□□□ -0.74
PACRG-207ENST00000542936 MAP2K5Q13163 448 aa10.41□□□□□ -0.74
PACRG-207ENST00000542936 GFRA3O60609 400 aa10.4□□□□□ -0.74
PACRG-207ENST00000542936 GGCXP38435 758 aa10.4□□□□□ -0.74
PACRG-207ENST00000542936 DAXXQ9UER7 740 aaPredicted RBP10.4□□□□□ -0.74
PACRG-207ENST00000542936 V9GY48 417 aaPredicted RBP10.4□□□□□ -0.74
PACRG-207ENST00000542936 ABCC8Q09428 1581 aa10.39□□□□□ -0.75
PACRG-207ENST00000542936 ACTN4O43707 911 aaKnown RBP10.39□□□□□ -0.75
PACRG-207ENST00000542936 ZPR1O75312 459 aa10.39□□□□□ -0.75
PACRG-207ENST00000542936 TLL1O43897 1013 aa10.38□□□□□ -0.75
PACRG-207ENST00000542936 PUS10Q3MIT2 529 aaKnown RBP10.38□□□□□ -0.75
PACRG-207ENST00000542936 RSPH4AQ5TD94 716 aa10.38□□□□□ -0.75
PACRG-207ENST00000542936 IRF6O14896 467 aa10.37□□□□□ -0.75
PACRG-207ENST00000542936 CCDC102AQ96A19 550 aa10.37□□□□□ -0.75
PACRG-207ENST00000542936 BICRAQ9NZM4 1560 aa10.36□□□□□ -0.75
PACRG-207ENST00000542936 SOGA1O94964 1423 aa10.36□□□□□ -0.75
PACRG-207ENST00000542936 UNC13AQ9UPW8 1703 aa10.36□□□□□ -0.75
PACRG-207ENST00000542936 TMUB1Q9BVT8 246 aa10.35□□□□□ -0.75
PACRG-207ENST00000542936 MINK1Q8N4C8 1332 aaPredicted RBP10.34□□□□□ -0.75
PACRG-207ENST00000542936 MDM2Q00987 491 aaPredicted RBP10.34□□□□□ -0.75
PACRG-207ENST00000542936 EEA1Q15075 1411 aa10.33□□□□□ -0.76
PACRG-207ENST00000542936 NRG2O14511 850 aaPredicted RBP10.33□□□□□ -0.76
PACRG-207ENST00000542936 SULF1Q8IWU6 871 aa10.33□□□□□ -0.76
PACRG-207ENST00000542936 KRI1Q8N9T8 703 aaKnown RBP10.33□□□□□ -0.76
PACRG-207ENST00000542936 TNIKQ9UKE5 1360 aa10.33□□□□□ -0.76
PACRG-207ENST00000542936 TRAF7Q6Q0C0 670 aa10.32□□□□□ -0.76
PACRG-207ENST00000542936 WRNQ14191 1432 aaPredicted RBP eCLIP10.32□□□□□ -0.76
PACRG-207ENST00000542936 CEP162Q5TB80 1403 aa10.32□□□□□ -0.76
PACRG-207ENST00000542936 NR1I2O75469 434 aa10.31□□□□□ -0.76
PACRG-207ENST00000542936 FUT2Q10981 343 aa10.31□□□□□ -0.76
PACRG-207ENST00000542936 ZC3H15Q8WU90 426 aaKnown RBP10.3□□□□□ -0.76
PACRG-207ENST00000542936 RUSC2Q8N2Y8 1516 aa10.29□□□□□ -0.76
PACRG-207ENST00000542936 GCGRP47871 477 aa10.29□□□□□ -0.76
PACRG-207ENST00000542936 PEG3Q9GZU2 1588 aa10.29□□□□□ -0.76
PACRG-207ENST00000542936 S1PR4O95977 384 aa10.28□□□□□ -0.76
PACRG-207ENST00000542936 UBTFP17480 764 aaKnown RBP10.28□□□□□ -0.76
PACRG-207ENST00000542936 SCUBE3Q8IX30 993 aa10.28□□□□□ -0.76
PACRG-207ENST00000542936 PDZRN3Q9UPQ7 1066 aa10.28□□□□□ -0.76
PACRG-207ENST00000542936 RNF223E7ERA6 249 aa10.27□□□□□ -0.77
PACRG-207ENST00000542936 LCE2BO14633 110 aa10.27□□□□□ -0.77
PACRG-207ENST00000542936 PPEF1O14829 653 aaPredicted RBP10.27□□□□□ -0.77
PACRG-207ENST00000542936 ATAD2BQ9ULI0 1458 aa10.27□□□□□ -0.77
PACRG-207ENST00000542936 ADH1BP00325 375 aa10.26□□□□□ -0.77
PACRG-207ENST00000542936 ZMYND10O75800 440 aa10.25□□□□□ -0.77
PACRG-207ENST00000542936 CD46P15529 392 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms