RNA–Protein interactions for RNA: ENST00000542876.1

PPP1CA-210, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-210ENST00000542876 CHGAP10645 457 aaKnown RBP26.69■■□□□ 1.86
PPP1CA-210ENST00000542876 FAM135BQ49AJ0 1406 aa26.68■■□□□ 1.86
PPP1CA-210ENST00000542876 RIMS2Q9UQ26 1411 aa26.67■■□□□ 1.86
PPP1CA-210ENST00000542876 PLEKHG1Q9ULL1 1385 aa26.67■■□□□ 1.86
PPP1CA-210ENST00000542876 ITGAEP38570 1179 aa26.66■■□□□ 1.86
PPP1CA-210ENST00000542876 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.66■■□□□ 1.86
PPP1CA-210ENST00000542876 RBM33Q96EV2 1170 aaKnown RBP26.66■■□□□ 1.86
PPP1CA-210ENST00000542876 XIRP1Q702N8 1843 aaKnown RBP26.66■■□□□ 1.86
PPP1CA-210ENST00000542876 NKTRP30414 1462 aaKnown RBP26.66■■□□□ 1.86
PPP1CA-210ENST00000542876 UNC13BO14795 1591 aa26.66■■□□□ 1.86
PPP1CA-210ENST00000542876 ZFYVE9O95405 1425 aa26.65■■□□□ 1.86
PPP1CA-210ENST00000542876 MSH6P52701 1360 aa26.63■■□□□ 1.85
PPP1CA-210ENST00000542876 GCC2Q8IWJ2 1684 aa26.63■■□□□ 1.85
PPP1CA-210ENST00000542876 NUP155O75694 1391 aa26.62■■□□□ 1.85
PPP1CA-210ENST00000542876 NWD1Q149M9 1564 aa26.61■■□□□ 1.85
PPP1CA-210ENST00000542876 TMEM131LA2VDJ0 1609 aa26.59■■□□□ 1.85
PPP1CA-210ENST00000542876 PPARGC1BQ86YN6 1023 aaKnown RBP26.59■■□□□ 1.85
PPP1CA-210ENST00000542876 TBX22Q9Y458 520 aa26.59■■□□□ 1.85
PPP1CA-210ENST00000542876 NUTM2DQ5VT03 806 aaPredicted RBP26.56■■□□□ 1.84
PPP1CA-210ENST00000542876 IQGAP3Q86VI3 1631 aa26.56■■□□□ 1.84
PPP1CA-210ENST00000542876 E9PCH4 1651 aa26.55■■□□□ 1.84
PPP1CA-210ENST00000542876 SLAIN2Q9P270 581 aa26.55■■□□□ 1.84
PPP1CA-210ENST00000542876 C14orf37Q86TY3 774 aa26.54■■□□□ 1.84
PPP1CA-210ENST00000542876 MYO5BQ9ULV0 1848 aa26.53■■□□□ 1.84
PPP1CA-210ENST00000542876 ROBO1Q9Y6N7 1651 aa26.52■■□□□ 1.84
PPP1CA-210ENST00000542876 NCOA3Q9Y6Q9 1424 aa26.49■■□□□ 1.83
PPP1CA-210ENST00000542876 PIK3R4Q99570 1358 aa26.48■■□□□ 1.83
PPP1CA-210ENST00000542876 ADAMTS13Q76LX8 1427 aa26.48■■□□□ 1.83
PPP1CA-210ENST00000542876 CHD2O14647 1828 aaKnown RBP26.47■■□□□ 1.83
PPP1CA-210ENST00000542876 DIP2AQ14689 1571 aa26.46■■□□□ 1.83
PPP1CA-210ENST00000542876 RGS17Q9UGC6 210 aaPredicted RBP26.46■■□□□ 1.83
PPP1CA-210ENST00000542876 ZNF326Q5BKZ1 582 aaKnown RBP26.44■■□□□ 1.82
PPP1CA-210ENST00000542876 ATF3P18847 181 aa26.43■■□□□ 1.82
PPP1CA-210ENST00000542876 CADPS2Q86UW7 1296 aa26.43■■□□□ 1.82
PPP1CA-210ENST00000542876 C19orf44Q9H6X5 657 aa26.43■■□□□ 1.82
PPP1CA-210ENST00000542876 AMOTL2Q9Y2J4 779 aa26.42■■□□□ 1.82
PPP1CA-210ENST00000542876 TRPM2O94759 1503 aa26.4■■□□□ 1.82
PPP1CA-210ENST00000542876 JCADQ9P266 1359 aa26.4■■□□□ 1.82
PPP1CA-210ENST00000542876 PHLPP1O60346 1717 aa26.36■■□□□ 1.81
PPP1CA-210ENST00000542876 RRBP1Q9P2E9 1410 aaKnown RBP26.34■■□□□ 1.81
PPP1CA-210ENST00000542876 POTEAQ6S8J7 498 aa26.34■■□□□ 1.81
PPP1CA-210ENST00000542876 PTPRUQ92729 1446 aa26.33■■□□□ 1.81
PPP1CA-210ENST00000542876 SPHKAPQ2M3C7 1700 aa26.33■■□□□ 1.81
PPP1CA-210ENST00000542876 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.3■■□□□ 1.8
PPP1CA-210ENST00000542876 NAIPQ13075 1403 aa26.3■■□□□ 1.8
PPP1CA-210ENST00000542876 SETBP1Q9Y6X0 1596 aa26.29■■□□□ 1.8
PPP1CA-210ENST00000542876 TRIM52Q96A61 297 aa26.29■■□□□ 1.8
PPP1CA-210ENST00000542876 SPATA31A6Q5VVP1 1343 aa26.28■■□□□ 1.8
PPP1CA-210ENST00000542876 MEX3CQ5U5Q3 659 aaKnown RBP26.27■■□□□ 1.8
PPP1CA-210ENST00000542876 DCCP43146 1447 aa26.27■■□□□ 1.8
PPP1CA-210ENST00000542876 COL16A1Q07092 1604 aaPredicted RBP26.27■■□□□ 1.8
PPP1CA-210ENST00000542876 METP08581 1390 aa26.25■■□□□ 1.79
PPP1CA-210ENST00000542876 BRINP3Q76B58 766 aa26.25■■□□□ 1.79
PPP1CA-210ENST00000542876 AHDC1Q5TGY3 1603 aaPredicted RBP26.24■■□□□ 1.79
PPP1CA-210ENST00000542876 NRXN3Q9Y4C0 1643 aa26.24■■□□□ 1.79
PPP1CA-210ENST00000542876 CLTCL1P53675 1640 aa26.22■■□□□ 1.79
PPP1CA-210ENST00000542876 SLC4A1APQ9BWU0 796 aaKnown RBP26.21■■□□□ 1.79
PPP1CA-210ENST00000542876 XRN1Q8IZH2 1706 aaKnown RBP26.21■■□□□ 1.79
PPP1CA-210ENST00000542876 NEXMIFQ5QGS0 1516 aa26.2■■□□□ 1.79
PPP1CA-210ENST00000542876 VGFO15240 615 aaPredicted RBP26.2■■□□□ 1.78
PPP1CA-210ENST00000542876 HFM1A2PYH4 1435 aa26.2■■□□□ 1.78
PPP1CA-210ENST00000542876 ZNF772Q68DY9 489 aaPredicted RBP26.18■■□□□ 1.78
PPP1CA-210ENST00000542876 MST1RQ04912 1400 aa26.16■■□□□ 1.78
PPP1CA-210ENST00000542876 LRP6O75581 1613 aa26.16■■□□□ 1.78
PPP1CA-210ENST00000542876 ADGRL3Q9HAR2 1447 aa26.15■■□□□ 1.78
PPP1CA-210ENST00000542876 ASXL1Q8IXJ9 1541 aa26.15■■□□□ 1.78
PPP1CA-210ENST00000542876 RPGRIP1LQ68CZ1 1315 aa26.14■■□□□ 1.78
PPP1CA-210ENST00000542876 KIF1BO60333 1816 aa26.14■■□□□ 1.78
PPP1CA-210ENST00000542876 NUTM2BA6NNL0 878 aaPredicted RBP26.14■■□□□ 1.78
PPP1CA-210ENST00000542876 NUTM2EB1AL46 878 aaPredicted RBP26.14■■□□□ 1.78
PPP1CA-210ENST00000542876 NUTM2AQ8IVF1 878 aaPredicted RBP26.14■■□□□ 1.78
PPP1CA-210ENST00000542876 SHPRHQ149N8 1683 aa26.12■■□□□ 1.77
PPP1CA-210ENST00000542876 LRRC59Q96AG4 307 aaKnown RBP26.12■■□□□ 1.77
PPP1CA-210ENST00000542876 SETD5Q9C0A6 1442 aa26.1■■□□□ 1.77
PPP1CA-210ENST00000542876 PTCH1Q13635 1447 aa26.07■■□□□ 1.76
PPP1CA-210ENST00000542876 RXRBP28702 533 aa26.04■■□□□ 1.76
PPP1CA-210ENST00000542876 DDX17Q92841 729 aaKnown RBP26.04■■□□□ 1.76
PPP1CA-210ENST00000542876 ROBO2Q9HCK4 1378 aa26.04■■□□□ 1.76
PPP1CA-210ENST00000542876 FOXD1Q16676 465 aa26.02■■□□□ 1.76
PPP1CA-210ENST00000542876 C1orf167Q5SNV9 1468 aa26.02■■□□□ 1.76
PPP1CA-210ENST00000542876 NHSL1Q5SYE7 1610 aa26.02■■□□□ 1.76
PPP1CA-210ENST00000542876 NALCNQ8IZF0 1738 aa26.02■■□□□ 1.76
PPP1CA-210ENST00000542876 CCDC144AA2RUR9 1427 aa26■■□□□ 1.75
PPP1CA-210ENST00000542876 AFF2P51816 1311 aa26■■□□□ 1.75
PPP1CA-210ENST00000542876 SETD1AO15047 1707 aaKnown RBP25.99■■□□□ 1.75
PPP1CA-210ENST00000542876 PRAG1Q86YV5 1406 aa25.98■■□□□ 1.75
PPP1CA-210ENST00000542876 PNPLA6Q8IY17 1366 aa25.98■■□□□ 1.75
PPP1CA-210ENST00000542876 RGL3Q3MIN7 710 aa25.97■■□□□ 1.75
PPP1CA-210ENST00000542876 C8orf37Q96NL8 207 aa25.97■■□□□ 1.75
PPP1CA-210ENST00000542876 ORAI2Q96SN7 254 aa25.97■■□□□ 1.75
PPP1CA-210ENST00000542876 MPHOSPH9Q99550 1183 aa25.96■■□□□ 1.75
PPP1CA-210ENST00000542876 ADGRF5Q8IZF2 1346 aa25.93■■□□□ 1.74
PPP1CA-210ENST00000542876 PPLO60437 1756 aa25.93■■□□□ 1.74
PPP1CA-210ENST00000542876 SOS2Q07890 1332 aaPredicted RBP25.92■■□□□ 1.74
PPP1CA-210ENST00000542876 ANKRD30BQ9BXX2 1392 aa25.92■■□□□ 1.74
PPP1CA-210ENST00000542876 ADAMTS2O95450 1211 aa25.91■■□□□ 1.74
PPP1CA-210ENST00000542876 NGLY1Q96IV0 654 aa25.91■■□□□ 1.74
PPP1CA-210ENST00000542876 ACIN1Q9UKV3 1341 aaKnown RBP25.9■■□□□ 1.74
PPP1CA-210ENST00000542876 UPF1Q92900 1129 aaKnown RBP eCLIP25.9■■□□□ 1.74
PPP1CA-210ENST00000542876 QTRT2Q9H974 415 aaKnown RBP25.9■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 238.8 ms