RNA–Protein interactions for RNA: ENST00000542658.1

PRR4-210, Transcript of proline rich 4, humanhuman

TSL 2

Gene PRR4, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRR4-210ENST00000542658 ANKK1Q8NFD2 765 aa12□□□□□ -0.49
PRR4-210ENST00000542658 MINK1Q8N4C8 1332 aaPredicted RBP12□□□□□ -0.49
PRR4-210ENST00000542658 IRF6O14896 467 aa11.99□□□□□ -0.49
PRR4-210ENST00000542658 PROX2Q3B8N5 592 aa11.98□□□□□ -0.49
PRR4-210ENST00000542658 ERCC6Q03468 1493 aa11.97□□□□□ -0.49
PRR4-210ENST00000542658 AK7Q96M32 723 aa11.97□□□□□ -0.49
PRR4-210ENST00000542658 RBM27Q9P2N5 1060 aaKnown RBP11.97□□□□□ -0.49
PRR4-210ENST00000542658 RABGEF1Q9UJ41 708 aa11.97□□□□□ -0.49
PRR4-210ENST00000542658 FAM161AQ3B820 660 aa11.96□□□□□ -0.49
PRR4-210ENST00000542658 TTC13Q8NBP0 860 aa11.96□□□□□ -0.49
PRR4-210ENST00000542658 FAM198AQ9UFP1 575 aa11.96□□□□□ -0.49
PRR4-210ENST00000542658 TSKSQ9UJT2 592 aa11.96□□□□□ -0.49
PRR4-210ENST00000542658 TRIM6-TRIM34B2RNG4 842 aa11.95□□□□□ -0.5
PRR4-210ENST00000542658 CCDC102AQ96A19 550 aa11.95□□□□□ -0.5
PRR4-210ENST00000542658 SOWAHBA6NEL2 793 aa11.94□□□□□ -0.5
PRR4-210ENST00000542658 KCNC4Q03721 635 aa11.94□□□□□ -0.5
PRR4-210ENST00000542658 LAPTM4AQ15012 233 aa11.94□□□□□ -0.5
PRR4-210ENST00000542658 TRAF7Q6Q0C0 670 aa11.94□□□□□ -0.5
PRR4-210ENST00000542658 WBP1LQ9NX94 342 aa11.93□□□□□ -0.5
PRR4-210ENST00000542658 ONECUT3O60422 494 aaPredicted RBP11.92□□□□□ -0.5
PRR4-210ENST00000542658 PACS2Q86VP3 889 aa11.92□□□□□ -0.5
PRR4-210ENST00000542658 KIAA1468Q9P260 1216 aa11.92□□□□□ -0.5
PRR4-210ENST00000542658 GFRA3O60609 400 aa11.91□□□□□ -0.5
PRR4-210ENST00000542658 ADGRG1Q9Y653 693 aa11.91□□□□□ -0.5
PRR4-210ENST00000542658 TRIM66O15016 1216 aa11.9□□□□□ -0.5
PRR4-210ENST00000542658 NYAP1Q6ZVC0 841 aa11.9□□□□□ -0.5
PRR4-210ENST00000542658 C3orf80F5H4A9 247 aa11.89□□□□□ -0.51
PRR4-210ENST00000542658 OATP04181 439 aa11.89□□□□□ -0.51
PRR4-210ENST00000542658 NUDT18Q6ZVK8 323 aa11.89□□□□□ -0.51
PRR4-210ENST00000542658 PNMA3Q9UL41 463 aa11.89□□□□□ -0.51
PRR4-210ENST00000542658 LAPTM4BQ86VI4 370 aa11.88□□□□□ -0.51
PRR4-210ENST00000542658 TATDN2Q93075 761 aa11.88□□□□□ -0.51
PRR4-210ENST00000542658 ZFRQ96KR1 1074 aaKnown RBP11.88□□□□□ -0.51
PRR4-210ENST00000542658 CFTRP13569 1480 aa11.88□□□□□ -0.51
PRR4-210ENST00000542658 RBM46Q8TBY0 533 aaKnown RBP11.87□□□□□ -0.51
PRR4-210ENST00000542658 NBPF26B4DH59 902 aa11.86□□□□□ -0.51
PRR4-210ENST00000542658 SMAPO00193 183 aa11.86□□□□□ -0.51
PRR4-210ENST00000542658 METTL3Q86U44 580 aaKnown RBP11.86□□□□□ -0.51
PRR4-210ENST00000542658 PXYLP1Q8TE99 480 aa11.85□□□□□ -0.51
PRR4-210ENST00000542658 PHOX2BQ99453 314 aa11.85□□□□□ -0.51
PRR4-210ENST00000542658 EYA1Q99502 592 aa11.85□□□□□ -0.51
PRR4-210ENST00000542658 PDE4DQ08499 809 aa11.83□□□□□ -0.52
PRR4-210ENST00000542658 SEPT9Q9UHD8 586 aaPredicted RBP11.83□□□□□ -0.52
PRR4-210ENST00000542658 PRDM2Q13029 1718 aa11.83□□□□□ -0.52
PRR4-210ENST00000542658 CADPSQ9ULU8 1353 aa11.82□□□□□ -0.52
PRR4-210ENST00000542658 NLRP7Q8WX94 980 aa11.82□□□□□ -0.52
PRR4-210ENST00000542658 AMHR2Q16671 573 aa11.81□□□□□ -0.52
PRR4-210ENST00000542658 RCCD1A6NED2 376 aa11.8□□□□□ -0.52
PRR4-210ENST00000542658 NEUROD2Q15784 382 aa11.8□□□□□ -0.52
PRR4-210ENST00000542658 BRPF1P55201 1214 aaPredicted RBP11.78□□□□□ -0.52
PRR4-210ENST00000542658 MDM2Q00987 491 aaPredicted RBP11.78□□□□□ -0.52
PRR4-210ENST00000542658 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.77□□□□□ -0.53
PRR4-210ENST00000542658 TTLL12Q14166 644 aaPredicted RBP11.77□□□□□ -0.53
PRR4-210ENST00000542658 GPBP1L1Q9HC44 474 aaPredicted RBP11.77□□□□□ -0.53
PRR4-210ENST00000542658 NRG2O14511 850 aaPredicted RBP11.76□□□□□ -0.53
PRR4-210ENST00000542658 DNAJB2P25686 324 aa11.76□□□□□ -0.53
PRR4-210ENST00000542658 FAM98CQ17RN3 349 aaKnown RBP11.76□□□□□ -0.53
PRR4-210ENST00000542658 TSR3Q9UJK0 312 aaKnown RBP11.76□□□□□ -0.53
PRR4-210ENST00000542658 HPS5Q9UPZ3 1129 aa11.76□□□□□ -0.53
PRR4-210ENST00000542658 WRNQ14191 1432 aaPredicted RBP eCLIP11.76□□□□□ -0.53
PRR4-210ENST00000542658 LAMC3Q9Y6N6 1575 aa11.75□□□□□ -0.53
PRR4-210ENST00000542658 PARP9Q8IXQ6 854 aa11.75□□□□□ -0.53
PRR4-210ENST00000542658 REPIN1Q9BWE0 567 aaKnown RBP11.75□□□□□ -0.53
PRR4-210ENST00000542658 PRKD2Q9BZL6 878 aa11.75□□□□□ -0.53
PRR4-210ENST00000542658 CLCN1P35523 988 aa11.74□□□□□ -0.53
PRR4-210ENST00000542658 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.74□□□□□ -0.53
PRR4-210ENST00000542658 ABCC8Q09428 1581 aa11.74□□□□□ -0.53
PRR4-210ENST00000542658 GPCPD1Q9NPB8 672 aa11.73□□□□□ -0.53
PRR4-210ENST00000542658 ZNF787Q6DD87 383 aa11.72□□□□□ -0.53
PRR4-210ENST00000542658 TMUB1Q9BVT8 246 aa11.72□□□□□ -0.53
PRR4-210ENST00000542658 KDM4CQ9H3R0 1056 aa11.72□□□□□ -0.53
PRR4-210ENST00000542658 TMEM134Q9H6X4 195 aa11.72□□□□□ -0.53
PRR4-210ENST00000542658 DAXXQ9UER7 740 aaPredicted RBP11.72□□□□□ -0.53
PRR4-210ENST00000542658 HDGFP51858 240 aaKnown RBP11.71□□□□□ -0.53
PRR4-210ENST00000542658 GIGYF2Q6Y7W6 1299 aaKnown RBP11.71□□□□□ -0.53
PRR4-210ENST00000542658 LRCH3Q96II8 777 aa11.71□□□□□ -0.53
PRR4-210ENST00000542658 TOP2BQ02880 1626 aa11.71□□□□□ -0.54
PRR4-210ENST00000542658 SWT1Q5T5J6 900 aaKnown RBP11.7□□□□□ -0.54
PRR4-210ENST00000542658 BIVM-ERCC5R4GMW8 1640 aa11.7□□□□□ -0.54
PRR4-210ENST00000542658 TJAP1Q5JTD0 557 aa11.69□□□□□ -0.54
PRR4-210ENST00000542658 SAMD7Q7Z3H4 446 aa11.69□□□□□ -0.54
PRR4-210ENST00000542658 SYNJ1O43426 1573 aa11.68□□□□□ -0.54
PRR4-210ENST00000542658 SSTR3P32745 418 aaPredicted RBP11.68□□□□□ -0.54
PRR4-210ENST00000542658 ZNF775Q96BV0 537 aaPredicted RBP11.68□□□□□ -0.54
PRR4-210ENST00000542658 EEA1Q15075 1411 aa11.68□□□□□ -0.54
PRR4-210ENST00000542658 THOC2Q8NI27 1593 aaKnown RBP11.67□□□□□ -0.54
PRR4-210ENST00000542658 FAM217BQ9NTX9 383 aaPredicted RBP11.66□□□□□ -0.54
PRR4-210ENST00000542658 FANCD2Q9BXW9 1451 aa11.65□□□□□ -0.54
PRR4-210ENST00000542658 DDX11L8A8MPP1 907 aa11.65□□□□□ -0.54
PRR4-210ENST00000542658 MS4A1P11836 297 aa11.65□□□□□ -0.54
PRR4-210ENST00000542658 V9GY48 417 aaPredicted RBP11.65□□□□□ -0.54
PRR4-210ENST00000542658 PDS5BQ9NTI5 1447 aa11.65□□□□□ -0.54
PRR4-210ENST00000542658 PPP1R18Q6NYC8 613 aa11.64□□□□□ -0.55
PRR4-210ENST00000542658 SULF1Q8IWU6 871 aa11.63□□□□□ -0.55
PRR4-210ENST00000542658 CUX1P39880 1505 aa11.63□□□□□ -0.55
PRR4-210ENST00000542658 NESP48681 1621 aa11.63□□□□□ -0.55
PRR4-210ENST00000542658 RNF40O75150 1001 aa11.62□□□□□ -0.55
PRR4-210ENST00000542658 PPP4CP60510 307 aa11.62□□□□□ -0.55
PRR4-210ENST00000542658 IL27Q8NEV9 243 aa11.62□□□□□ -0.55
PRR4-210ENST00000542658 FAM117AQ9C073 453 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms