RNA–Protein interactions for RNA: ENST00000542095.6

NECAP1-206, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 2

Gene NECAP1, Length 2,385 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-206ENST00000542095 BRD4O60885 1362 aaPredicted RBP14.72□□□□□ -0.05
NECAP1-206ENST00000542095 ZC3H13Q5T200 1668 aaKnown RBP14.72□□□□□ -0.05
NECAP1-206ENST00000542095 EIF3AQ14152 1382 aaKnown RBP14.71□□□□□ -0.05
NECAP1-206ENST00000542095 TMC1Q8TDI8 760 aa14.71□□□□□ -0.05
NECAP1-206ENST00000542095 PPLO60437 1756 aa14.71□□□□□ -0.06
NECAP1-206ENST00000542095 WASHC2CQ9Y4E1 1318 aa14.71□□□□□ -0.06
NECAP1-206ENST00000542095 PARD3Q8TEW0 1356 aa14.7□□□□□ -0.06
NECAP1-206ENST00000542095 NRXN1Q9ULB1 1477 aa14.69□□□□□ -0.06
NECAP1-206ENST00000542095 PER1O15534 1290 aaPredicted RBP14.69□□□□□ -0.06
NECAP1-206ENST00000542095 CDCA8Q53HL2 280 aa14.69□□□□□ -0.06
NECAP1-206ENST00000542095 PNISRQ8TF01 805 aaKnown RBP14.69□□□□□ -0.06
NECAP1-206ENST00000542095 DIP2BQ9P265 1576 aa14.68□□□□□ -0.06
NECAP1-206ENST00000542095 SIGLEC1Q9BZZ2 1709 aa14.68□□□□□ -0.06
NECAP1-206ENST00000542095 SYNMO15061 1565 aa14.68□□□□□ -0.06
NECAP1-206ENST00000542095 KDM5AP29375 1690 aaKnown RBP14.67□□□□□ -0.06
NECAP1-206ENST00000542095 BCANQ96GW7 911 aa14.67□□□□□ -0.06
NECAP1-206ENST00000542095 PANK3Q9H999 370 aa14.67□□□□□ -0.06
NECAP1-206ENST00000542095 ADGRF5Q8IZF2 1346 aa14.67□□□□□ -0.06
NECAP1-206ENST00000542095 NLRP13Q86W25 1043 aa14.66□□□□□ -0.06
NECAP1-206ENST00000542095 ZMYM4Q5VZL5 1548 aa14.66□□□□□ -0.06
NECAP1-206ENST00000542095 SETBP1Q9Y6X0 1596 aa14.66□□□□□ -0.06
NECAP1-206ENST00000542095 PIK3C2BO00750 1634 aa14.66□□□□□ -0.06
NECAP1-206ENST00000542095 TSPOAP1O95153 1857 aa14.66□□□□□ -0.06
NECAP1-206ENST00000542095 SLC24A1O60721 1099 aa14.66□□□□□ -0.06
NECAP1-206ENST00000542095 LRPPRCP42704 1394 aaKnown RBP14.66□□□□□ -0.06
NECAP1-206ENST00000542095 CFAP70Q5T0N1 1121 aa14.65□□□□□ -0.06
NECAP1-206ENST00000542095 NOS1P29475 1434 aa14.65□□□□□ -0.06
NECAP1-206ENST00000542095 MYO3AQ8NEV4 1616 aa14.65□□□□□ -0.06
NECAP1-206ENST00000542095 MYOM1P52179 1685 aa14.65□□□□□ -0.06
NECAP1-206ENST00000542095 CHGAP10645 457 aaKnown RBP14.65□□□□□ -0.07
NECAP1-206ENST00000542095 YEATS2Q9ULM3 1422 aa14.64□□□□□ -0.07
NECAP1-206ENST00000542095 ARHGAP31Q2M1Z3 1444 aa14.64□□□□□ -0.07
NECAP1-206ENST00000542095 RPGRIP1LQ68CZ1 1315 aa14.63□□□□□ -0.07
NECAP1-206ENST00000542095 FAM69CQ0P6D2 419 aa14.63□□□□□ -0.07
NECAP1-206ENST00000542095 CC2D1BQ5T0F9 858 aaKnown RBP14.61□□□□□ -0.07
NECAP1-206ENST00000542095 PIK3C2GO75747 1445 aa14.61□□□□□ -0.07
NECAP1-206ENST00000542095 SMG6Q86US8 1419 aaKnown RBP14.61□□□□□ -0.07
NECAP1-206ENST00000542095 PREX1Q8TCU6 1659 aa14.6□□□□□ -0.07
NECAP1-206ENST00000542095 ERICH6BQ5W0A0 696 aa14.59□□□□□ -0.07
NECAP1-206ENST00000542095 KNSTRNQ9Y448 316 aa14.59□□□□□ -0.07
NECAP1-206ENST00000542095 ERVK-7P63135 1459 aa14.59□□□□□ -0.07
NECAP1-206ENST00000542095 SBNO2Q9Y2G9 1366 aa14.58□□□□□ -0.08
NECAP1-206ENST00000542095 REREQ9P2R6 1566 aa14.58□□□□□ -0.08
NECAP1-206ENST00000542095 QRICH2Q9H0J4 1663 aa14.58□□□□□ -0.08
NECAP1-206ENST00000542095 C14orf93Q9H972 538 aaKnown RBP14.58□□□□□ -0.08
NECAP1-206ENST00000542095 NEXMIFQ5QGS0 1516 aa14.57□□□□□ -0.08
NECAP1-206ENST00000542095 ASXL1Q8IXJ9 1541 aa14.57□□□□□ -0.08
NECAP1-206ENST00000542095 MYO5BQ9ULV0 1848 aa14.57□□□□□ -0.08
NECAP1-206ENST00000542095 NUDCQ9Y266 331 aa14.57□□□□□ -0.08
NECAP1-206ENST00000542095 ADGRB1O14514 1584 aa14.56□□□□□ -0.08
NECAP1-206ENST00000542095 INSRP06213 1382 aa14.56□□□□□ -0.08
NECAP1-206ENST00000542095 SLC52A1Q9NWF4 448 aa14.55□□□□□ -0.08
NECAP1-206ENST00000542095 NPC1L1Q9UHC9 1359 aa14.55□□□□□ -0.08
NECAP1-206ENST00000542095 IRX6P78412 446 aaPredicted RBP14.54□□□□□ -0.08
NECAP1-206ENST00000542095 CENPJQ9HC77 1338 aaPredicted RBP14.54□□□□□ -0.08
NECAP1-206ENST00000542095 KIF13AQ9H1H9 1805 aa14.54□□□□□ -0.08
NECAP1-206ENST00000542095 AGLP35573 1532 aa14.54□□□□□ -0.08
NECAP1-206ENST00000542095 VGFO15240 615 aaPredicted RBP14.54□□□□□ -0.08
NECAP1-206ENST00000542095 AMER1Q5JTC6 1135 aaPredicted RBP14.54□□□□□ -0.08
NECAP1-206ENST00000542095 TMEM131LA2VDJ0 1609 aa14.53□□□□□ -0.08
NECAP1-206ENST00000542095 ARHGEF28Q8N1W1 1705 aaKnown RBP14.52□□□□□ -0.08
NECAP1-206ENST00000542095 IDI1Q13907 227 aa14.52□□□□□ -0.09
NECAP1-206ENST00000542095 ZFYVE9O95405 1425 aa14.52□□□□□ -0.09
NECAP1-206ENST00000542095 BLMP54132 1417 aaPredicted RBP14.52□□□□□ -0.09
NECAP1-206ENST00000542095 TRAK1Q9UPV9 953 aa14.51□□□□□ -0.09
NECAP1-206ENST00000542095 PPP6R1Q9UPN7 881 aa14.5□□□□□ -0.09
NECAP1-206ENST00000542095 CLTCQ00610 1675 aaKnown RBP14.5□□□□□ -0.09
NECAP1-206ENST00000542095 PPP2R1AP30153 589 aa14.49□□□□□ -0.09
NECAP1-206ENST00000542095 TSHZ2Q9NRE2 1034 aa14.49□□□□□ -0.09
NECAP1-206ENST00000542095 PPP4R2Q9NY27 417 aa14.49□□□□□ -0.09
NECAP1-206ENST00000542095 TMEM132EQ6IEE7 984 aa14.48□□□□□ -0.09
NECAP1-206ENST00000542095 SENP3-EIF4A1A0A087X0R7 540 aa14.48□□□□□ -0.09
NECAP1-206ENST00000542095 PDE3BQ13370 1112 aa14.48□□□□□ -0.09
NECAP1-206ENST00000542095 ARHGEF40Q8TER5 1519 aa14.47□□□□□ -0.09
NECAP1-206ENST00000542095 RNF123Q5XPI4 1314 aa14.47□□□□□ -0.09
NECAP1-206ENST00000542095 NUTM2DQ5VT03 806 aaPredicted RBP14.47□□□□□ -0.09
NECAP1-206ENST00000542095 WDR43Q15061 677 aaKnown RBP eCLIP14.44□□□□□ -0.1
NECAP1-206ENST00000542095 PUS7Q96PZ0 661 aaKnown RBP14.44□□□□□ -0.1
NECAP1-206ENST00000542095 CARD14Q9BXL6 1004 aa14.44□□□□□ -0.1
NECAP1-206ENST00000542095 USP32Q8NFA0 1604 aa14.44□□□□□ -0.1
NECAP1-206ENST00000542095 SPATA31D1Q6ZQQ2 1576 aa14.43□□□□□ -0.1
NECAP1-206ENST00000542095 FBXO31Q5XUX0 539 aaPredicted RBP14.43□□□□□ -0.1
NECAP1-206ENST00000542095 SALL2Q9Y467 1007 aaPredicted RBP14.42□□□□□ -0.1
NECAP1-206ENST00000542095 EVC2Q86UK5 1308 aa14.42□□□□□ -0.1
NECAP1-206ENST00000542095 ADAMTS8Q9UP79 889 aa14.42□□□□□ -0.1
NECAP1-206ENST00000542095 TULP4Q9NRJ4 1543 aa14.42□□□□□ -0.1
NECAP1-206ENST00000542095 NSD3Q9BZ95 1437 aa14.41□□□□□ -0.1
NECAP1-206ENST00000542095 STAG3Q9UJ98 1225 aa14.4□□□□□ -0.1
NECAP1-206ENST00000542095 ALKQ9UM73 1620 aa14.39□□□□□ -0.11
NECAP1-206ENST00000542095 SLC12A5Q9H2X9 1139 aa14.39□□□□□ -0.11
NECAP1-206ENST00000542095 DNAJC5Q9H3Z4 198 aa14.39□□□□□ -0.11
NECAP1-206ENST00000542095 RCAN3Q9UKA8 241 aa14.38□□□□□ -0.11
NECAP1-206ENST00000542095 PTPRMP28827 1452 aa14.37□□□□□ -0.11
NECAP1-206ENST00000542095 A2ML1A8K2U0 1454 aa14.37□□□□□ -0.11
NECAP1-206ENST00000542095 YTHDC2Q9H6S0 1430 aaKnown RBP14.37□□□□□ -0.11
NECAP1-206ENST00000542095 MLECQ14165 292 aa14.37□□□□□ -0.11
NECAP1-206ENST00000542095 B4GALNT3Q6L9W6 998 aa14.36□□□□□ -0.11
NECAP1-206ENST00000542095 STK26Q9P289 416 aa14.36□□□□□ -0.11
NECAP1-206ENST00000542095 ANKRD36BQ8N2N9 1353 aa14.36□□□□□ -0.11
NECAP1-206ENST00000542095 NINLQ9Y2I6 1382 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms