RNA–Protein interactions for RNA: ENST00000541899.1

LRTOMT-219, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 5

Gene LRTOMT, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-219ENST00000541899 RGL3Q3MIN7 710 aa22.47■■□□□ 1.19
LRTOMT-219ENST00000541899 ZNF326Q5BKZ1 582 aaKnown RBP22.47■■□□□ 1.19
LRTOMT-219ENST00000541899 ZFYVE9O95405 1425 aa22.47■■□□□ 1.19
LRTOMT-219ENST00000541899 TONSLQ96HA7 1378 aa22.46■■□□□ 1.19
LRTOMT-219ENST00000541899 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.45■■□□□ 1.18
LRTOMT-219ENST00000541899 L3MBTL2Q969R5 705 aa22.44■■□□□ 1.18
LRTOMT-219ENST00000541899 RIMS2Q9UQ26 1411 aa22.44■■□□□ 1.18
LRTOMT-219ENST00000541899 MYOM2P54296 1465 aa22.42■■□□□ 1.18
LRTOMT-219ENST00000541899 VGFO15240 615 aaPredicted RBP22.42■■□□□ 1.18
LRTOMT-219ENST00000541899 AEBP2Q6ZN18 517 aaPredicted RBP22.4■■□□□ 1.18
LRTOMT-219ENST00000541899 DCAF11Q8TEB1 546 aa22.4■■□□□ 1.18
LRTOMT-219ENST00000541899 EID1Q9Y6B2 187 aa22.4■■□□□ 1.18
LRTOMT-219ENST00000541899 ANKLE2Q86XL3 938 aa22.39■■□□□ 1.17
LRTOMT-219ENST00000541899 LTKP29376 864 aa22.38■■□□□ 1.17
LRTOMT-219ENST00000541899 TXNDC2Q86VQ3 553 aa22.38■■□□□ 1.17
LRTOMT-219ENST00000541899 SCAF11Q99590 1463 aaKnown RBP22.38■■□□□ 1.17
LRTOMT-219ENST00000541899 NRXN1Q9ULB1 1477 aa22.38■■□□□ 1.17
LRTOMT-219ENST00000541899 POLR1AO95602 1720 aaPredicted RBP22.37■■□□□ 1.17
LRTOMT-219ENST00000541899 MED14O60244 1454 aa22.35■■□□□ 1.17
LRTOMT-219ENST00000541899 PPP1R15AO75807 674 aaPredicted RBP22.34■■□□□ 1.17
LRTOMT-219ENST00000541899 HSPA2P54652 639 aa22.34■■□□□ 1.17
LRTOMT-219ENST00000541899 PLEKHG1Q9ULL1 1385 aa22.34■■□□□ 1.17
LRTOMT-219ENST00000541899 KDM2AQ9Y2K7 1162 aa22.33■■□□□ 1.17
LRTOMT-219ENST00000541899 ADGRF5Q8IZF2 1346 aa22.32■■□□□ 1.16
LRTOMT-219ENST00000541899 STRCQ7RTU9 1775 aa22.32■■□□□ 1.16
LRTOMT-219ENST00000541899 PIK3C2GO75747 1445 aa22.31■■□□□ 1.16
LRTOMT-219ENST00000541899 PRAG1Q86YV5 1406 aa22.31■■□□□ 1.16
LRTOMT-219ENST00000541899 SETBP1Q9Y6X0 1596 aa22.31■■□□□ 1.16
LRTOMT-219ENST00000541899 ZEB1P37275 1124 aaPredicted RBP22.31■■□□□ 1.16
LRTOMT-219ENST00000541899 NUTM2DQ5VT03 806 aaPredicted RBP22.3■■□□□ 1.16
LRTOMT-219ENST00000541899 NCKAP5LQ9HCH0 1330 aa22.29■■□□□ 1.16
LRTOMT-219ENST00000541899 KIAA1210Q9ULL0 1709 aa22.28■■□□□ 1.16
LRTOMT-219ENST00000541899 NRXN3Q9Y4C0 1643 aa22.28■■□□□ 1.16
LRTOMT-219ENST00000541899 IQGAP1P46940 1657 aa22.27■■□□□ 1.16
LRTOMT-219ENST00000541899 NPHP4O75161 1426 aaPredicted RBP22.27■■□□□ 1.16
LRTOMT-219ENST00000541899 LAMC1P11047 1609 aa22.27■■□□□ 1.16
LRTOMT-219ENST00000541899 DIP2AQ14689 1571 aa22.25■■□□□ 1.15
LRTOMT-219ENST00000541899 C14orf93Q9H972 538 aaKnown RBP22.25■■□□□ 1.15
LRTOMT-219ENST00000541899 ALKQ9UM73 1620 aa22.24■■□□□ 1.15
LRTOMT-219ENST00000541899 ADAMTS13Q76LX8 1427 aa22.24■■□□□ 1.15
LRTOMT-219ENST00000541899 NBPF8Q3BBV2 869 aa22.24■■□□□ 1.15
LRTOMT-219ENST00000541899 TRPM1Q7Z4N2 1603 aa22.24■■□□□ 1.15
LRTOMT-219ENST00000541899 SETD1AO15047 1707 aaKnown RBP22.23■■□□□ 1.15
LRTOMT-219ENST00000541899 TBX22Q9Y458 520 aa22.23■■□□□ 1.15
LRTOMT-219ENST00000541899 DMRT2Q9Y5R5 561 aa22.22■■□□□ 1.15
LRTOMT-219ENST00000541899 CFAP70Q5T0N1 1121 aa22.19■■□□□ 1.14
LRTOMT-219ENST00000541899 BCANQ96GW7 911 aa22.19■■□□□ 1.14
LRTOMT-219ENST00000541899 RALGAPBQ86X10 1494 aa22.19■■□□□ 1.14
LRTOMT-219ENST00000541899 PIK3R4Q99570 1358 aa22.18■■□□□ 1.14
LRTOMT-219ENST00000541899 GPRASP1Q5JY77 1395 aa22.16■■□□□ 1.14
LRTOMT-219ENST00000541899 SLC26A8Q96RN1 970 aa22.16■■□□□ 1.14
LRTOMT-219ENST00000541899 ADGRB1O14514 1584 aa22.16■■□□□ 1.14
LRTOMT-219ENST00000541899 ASXL1Q8IXJ9 1541 aa22.13■■□□□ 1.13
LRTOMT-219ENST00000541899 METP08581 1390 aa22.12■■□□□ 1.13
LRTOMT-219ENST00000541899 NBPF1Q3BBV0 1214 aa22.12■■□□□ 1.13
LRTOMT-219ENST00000541899 CHD2O14647 1828 aaKnown RBP22.12■■□□□ 1.13
LRTOMT-219ENST00000541899 ROCK2O75116 1388 aaKnown RBP22.12■■□□□ 1.13
LRTOMT-219ENST00000541899 SENP3Q9H4L4 574 aaPredicted RBP22.11■■□□□ 1.13
LRTOMT-219ENST00000541899 LRPPRCP42704 1394 aaKnown RBP22.09■■□□□ 1.13
LRTOMT-219ENST00000541899 YTHDC2Q9H6S0 1430 aaKnown RBP22.08■■□□□ 1.13
LRTOMT-219ENST00000541899 TMEM132EQ6IEE7 984 aa22.08■■□□□ 1.13
LRTOMT-219ENST00000541899 ABCC11Q96J66 1382 aa22.08■■□□□ 1.12
LRTOMT-219ENST00000541899 KNDC1Q76NI1 1749 aa22.08■■□□□ 1.12
LRTOMT-219ENST00000541899 PTPRUQ92729 1446 aa22.07■■□□□ 1.12
LRTOMT-219ENST00000541899 NWD1Q149M9 1564 aa22.07■■□□□ 1.12
LRTOMT-219ENST00000541899 TECPR2O15040 1411 aa22.06■■□□□ 1.12
LRTOMT-219ENST00000541899 XRN1Q8IZH2 1706 aaKnown RBP22.06■■□□□ 1.12
LRTOMT-219ENST00000541899 KCNA6P17658 529 aa22.06■■□□□ 1.12
LRTOMT-219ENST00000541899 SIRT1Q96EB6 747 aa22.06■■□□□ 1.12
LRTOMT-219ENST00000541899 CARD11Q9BXL7 1154 aa22.06■■□□□ 1.12
LRTOMT-219ENST00000541899 DLC1Q96QB1 1528 aa22.05■■□□□ 1.12
LRTOMT-219ENST00000541899 AMOTL2Q9Y2J4 779 aa22.03■■□□□ 1.12
LRTOMT-219ENST00000541899 CPS1P31327 1500 aa22.02■■□□□ 1.12
LRTOMT-219ENST00000541899 PTCH1Q13635 1447 aa22.01■■□□□ 1.11
LRTOMT-219ENST00000541899 ARHGEF28Q8N1W1 1705 aaKnown RBP22■■□□□ 1.11
LRTOMT-219ENST00000541899 STRCP1A6NGW2 1772 aa22■■□□□ 1.11
LRTOMT-219ENST00000541899 FAM135BQ49AJ0 1406 aa22■■□□□ 1.11
LRTOMT-219ENST00000541899 NKTRP30414 1462 aaKnown RBP22■■□□□ 1.11
LRTOMT-219ENST00000541899 TRAK1Q9UPV9 953 aa21.99■■□□□ 1.11
LRTOMT-219ENST00000541899 STK26Q9P289 416 aa21.98■■□□□ 1.11
LRTOMT-219ENST00000541899 EIF3AQ14152 1382 aaKnown RBP21.98■■□□□ 1.11
LRTOMT-219ENST00000541899 ZNF335Q9H4Z2 1342 aaPredicted RBP21.95■■□□□ 1.1
LRTOMT-219ENST00000541899 USP47Q96K76 1375 aa21.95■■□□□ 1.1
LRTOMT-219ENST00000541899 ROBO2Q9HCK4 1378 aa21.95■■□□□ 1.1
LRTOMT-219ENST00000541899 EIF4G2P78344 907 aaKnown RBP eCLIP21.94■■□□□ 1.1
LRTOMT-219ENST00000541899 NCOA3Q9Y6Q9 1424 aa21.94■■□□□ 1.1
LRTOMT-219ENST00000541899 LTBP4Q8N2S1 1624 aa21.91■■□□□ 1.1
LRTOMT-219ENST00000541899 CENPJQ9HC77 1338 aaPredicted RBP21.91■■□□□ 1.1
LRTOMT-219ENST00000541899 PRAM1Q96QH2 718 aa21.91■■□□□ 1.1
LRTOMT-219ENST00000541899 SBNO2Q9Y2G9 1366 aa21.9■■□□□ 1.1
LRTOMT-219ENST00000541899 SLC24A1O60721 1099 aa21.9■■□□□ 1.1
LRTOMT-219ENST00000541899 POGKQ9P215 609 aa21.9■■□□□ 1.1
LRTOMT-219ENST00000541899 ST20-MTHFSA0A0A6YYL1 179 aa21.89■■□□□ 1.09
LRTOMT-219ENST00000541899 WAPLQ7Z5K2 1190 aa21.89■■□□□ 1.09
LRTOMT-219ENST00000541899 PROSER2Q86WR7 435 aaPredicted RBP21.89■■□□□ 1.09
LRTOMT-219ENST00000541899 QRICH2Q9H0J4 1663 aa21.88■■□□□ 1.09
LRTOMT-219ENST00000541899 LRRC7Q96NW7 1537 aa21.88■■□□□ 1.09
LRTOMT-219ENST00000541899 PLEKHH1Q9ULM0 1364 aa21.87■■□□□ 1.09
LRTOMT-219ENST00000541899 HSPA5P11021 654 aaKnown RBP21.87■■□□□ 1.09
LRTOMT-219ENST00000541899 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms