RNA–Protein interactions for RNA: ENST00000541897.5

MSRB3-211, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 3

Gene MSRB3, Length 489 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-211ENST00000541897 STAG3Q9UJ98 1225 aa30.58■■■□□ 2.49
MSRB3-211ENST00000541897 SOCS7O14512 581 aa30.57■■■□□ 2.48
MSRB3-211ENST00000541897 CCER1Q8TC90 406 aaPredicted RBP30.56■■■□□ 2.48
MSRB3-211ENST00000541897 SLIT1O75093 1534 aa30.53■■■□□ 2.48
MSRB3-211ENST00000541897 ARHGAP23Q9P227 1491 aa30.52■■■□□ 2.48
MSRB3-211ENST00000541897 CHGAP10645 457 aaKnown RBP30.52■■■□□ 2.48
MSRB3-211ENST00000541897 TMEM2Q9UHN6 1383 aa30.51■■■□□ 2.47
MSRB3-211ENST00000541897 RPGRIP1LQ68CZ1 1315 aa30.5■■■□□ 2.47
MSRB3-211ENST00000541897 NPHP4O75161 1426 aaPredicted RBP30.49■■■□□ 2.47
MSRB3-211ENST00000541897 SIN3AQ96ST3 1273 aa30.49■■■□□ 2.47
MSRB3-211ENST00000541897 MYO5BQ9ULV0 1848 aa30.48■■■□□ 2.47
MSRB3-211ENST00000541897 MED14O60244 1454 aa30.47■■■□□ 2.47
MSRB3-211ENST00000541897 CPS1P31327 1500 aa30.47■■■□□ 2.47
MSRB3-211ENST00000541897 ZFYVE9O95405 1425 aa30.47■■■□□ 2.47
MSRB3-211ENST00000541897 IQGAP1P46940 1657 aa30.46■■■□□ 2.47
MSRB3-211ENST00000541897 HDGFP51858 240 aaKnown RBP30.46■■■□□ 2.47
MSRB3-211ENST00000541897 ZNF326Q5BKZ1 582 aaKnown RBP30.43■■■□□ 2.46
MSRB3-211ENST00000541897 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.43■■■□□ 2.46
MSRB3-211ENST00000541897 RIMS2Q9UQ26 1411 aa30.43■■■□□ 2.46
MSRB3-211ENST00000541897 NEXMIFQ5QGS0 1516 aa30.42■■■□□ 2.46
MSRB3-211ENST00000541897 RGL3Q3MIN7 710 aa30.41■■■□□ 2.46
MSRB3-211ENST00000541897 STAC3Q96MF2 364 aa30.41■■■□□ 2.46
MSRB3-211ENST00000541897 NEUROD1Q13562 356 aa30.4■■■□□ 2.46
MSRB3-211ENST00000541897 EID1Q9Y6B2 187 aa30.4■■■□□ 2.46
MSRB3-211ENST00000541897 STRCP1A6NGW2 1772 aa30.39■■■□□ 2.46
MSRB3-211ENST00000541897 SCAF1Q9H7N4 1312 aaKnown RBP30.39■■■□□ 2.46
MSRB3-211ENST00000541897 SCAF11Q99590 1463 aaKnown RBP30.38■■■□□ 2.45
MSRB3-211ENST00000541897 PIP4K2BP78356 416 aa30.38■■■□□ 2.45
MSRB3-211ENST00000541897 IFT172Q9UG01 1749 aa30.37■■■□□ 2.45
MSRB3-211ENST00000541897 TIMELESSQ9UNS1 1208 aa30.37■■■□□ 2.45
MSRB3-211ENST00000541897 PPLO60437 1756 aa30.36■■■□□ 2.45
MSRB3-211ENST00000541897 VGFO15240 615 aaPredicted RBP30.36■■■□□ 2.45
MSRB3-211ENST00000541897 TXNDC2Q86VQ3 553 aa30.36■■■□□ 2.45
MSRB3-211ENST00000541897 TOM1O60784 492 aa30.35■■■□□ 2.45
MSRB3-211ENST00000541897 LTKP29376 864 aa30.35■■■□□ 2.45
MSRB3-211ENST00000541897 MYOM2P54296 1465 aa30.34■■■□□ 2.45
MSRB3-211ENST00000541897 TONSLQ96HA7 1378 aa30.32■■■□□ 2.44
MSRB3-211ENST00000541897 PLEKHG1Q9ULL1 1385 aa30.3■■■□□ 2.44
MSRB3-211ENST00000541897 HSPA1LP34931 641 aa30.3■■■□□ 2.44
MSRB3-211ENST00000541897 L3MBTL2Q969R5 705 aa30.3■■■□□ 2.44
MSRB3-211ENST00000541897 PPP1R15AO75807 674 aaPredicted RBP30.29■■■□□ 2.44
MSRB3-211ENST00000541897 NRXN1Q9ULB1 1477 aa30.29■■■□□ 2.44
MSRB3-211ENST00000541897 DCAF11Q8TEB1 546 aa30.28■■■□□ 2.44
MSRB3-211ENST00000541897 ALKQ9UM73 1620 aa30.26■■■□□ 2.44
MSRB3-211ENST00000541897 LRRC7Q96NW7 1537 aa30.26■■■□□ 2.43
MSRB3-211ENST00000541897 SETBP1Q9Y6X0 1596 aa30.24■■■□□ 2.43
MSRB3-211ENST00000541897 NUTM2DQ5VT03 806 aaPredicted RBP30.23■■■□□ 2.43
MSRB3-211ENST00000541897 ADGRF5Q8IZF2 1346 aa30.22■■■□□ 2.43
MSRB3-211ENST00000541897 PIK3C2GO75747 1445 aa30.22■■■□□ 2.43
MSRB3-211ENST00000541897 MED1Q15648 1581 aaPredicted RBP30.2■■■□□ 2.43
MSRB3-211ENST00000541897 KDM2AQ9Y2K7 1162 aa30.19■■■□□ 2.42
MSRB3-211ENST00000541897 DIP2AQ14689 1571 aa30.18■■■□□ 2.42
MSRB3-211ENST00000541897 NRXN3Q9Y4C0 1643 aa30.18■■■□□ 2.42
MSRB3-211ENST00000541897 PRAG1Q86YV5 1406 aa30.17■■■□□ 2.42
MSRB3-211ENST00000541897 ADAMTS13Q76LX8 1427 aa30.16■■■□□ 2.42
MSRB3-211ENST00000541897 XIRP1Q702N8 1843 aaKnown RBP30.16■■■□□ 2.42
MSRB3-211ENST00000541897 SENP3Q9H4L4 574 aaPredicted RBP30.15■■■□□ 2.42
MSRB3-211ENST00000541897 TBX22Q9Y458 520 aa30.15■■■□□ 2.42
MSRB3-211ENST00000541897 LAMC1P11047 1609 aa30.13■■■□□ 2.41
MSRB3-211ENST00000541897 BCANQ96GW7 911 aa30.11■■■□□ 2.41
MSRB3-211ENST00000541897 C14orf93Q9H972 538 aaKnown RBP30.11■■■□□ 2.41
MSRB3-211ENST00000541897 KIAA1210Q9ULL0 1709 aa30.08■■■□□ 2.41
MSRB3-211ENST00000541897 PIK3R4Q99570 1358 aa30.08■■■□□ 2.41
MSRB3-211ENST00000541897 SETD1AO15047 1707 aaKnown RBP30.08■■■□□ 2.41
MSRB3-211ENST00000541897 SLC26A8Q96RN1 970 aa30.07■■■□□ 2.4
MSRB3-211ENST00000541897 NBPF8Q3BBV2 869 aa30.03■■■□□ 2.4
MSRB3-211ENST00000541897 CFAP70Q5T0N1 1121 aa30.03■■■□□ 2.4
MSRB3-211ENST00000541897 TRPM1Q7Z4N2 1603 aa30■■■□□ 2.39
MSRB3-211ENST00000541897 METP08581 1390 aa30■■■□□ 2.39
MSRB3-211ENST00000541897 ADGRB1O14514 1584 aa29.98■■■□□ 2.39
MSRB3-211ENST00000541897 KCNA6P17658 529 aa29.98■■■□□ 2.39
MSRB3-211ENST00000541897 RALGAPBQ86X10 1494 aa29.98■■■□□ 2.39
MSRB3-211ENST00000541897 ASXL1Q8IXJ9 1541 aa29.97■■■□□ 2.39
MSRB3-211ENST00000541897 RBM33Q96EV2 1170 aaKnown RBP29.97■■■□□ 2.39
MSRB3-211ENST00000541897 TMEM94Q12767 1356 aa29.96■■■□□ 2.39
MSRB3-211ENST00000541897 NWD1Q149M9 1564 aa29.95■■■□□ 2.39
MSRB3-211ENST00000541897 GPRASP1Q5JY77 1395 aa29.95■■■□□ 2.39
MSRB3-211ENST00000541897 ZEB1P37275 1124 aaPredicted RBP29.94■■■□□ 2.38
MSRB3-211ENST00000541897 CHD2O14647 1828 aaKnown RBP29.94■■■□□ 2.38
MSRB3-211ENST00000541897 PROSER2Q86WR7 435 aaPredicted RBP29.93■■■□□ 2.38
MSRB3-211ENST00000541897 LRPPRCP42704 1394 aaKnown RBP29.92■■■□□ 2.38
MSRB3-211ENST00000541897 PTPRUQ92729 1446 aa29.92■■■□□ 2.38
MSRB3-211ENST00000541897 YTHDC2Q9H6S0 1430 aaKnown RBP29.91■■■□□ 2.38
MSRB3-211ENST00000541897 XRN1Q8IZH2 1706 aaKnown RBP29.91■■■□□ 2.38
MSRB3-211ENST00000541897 ROCK2O75116 1388 aaKnown RBP29.9■■■□□ 2.38
MSRB3-211ENST00000541897 ABCC11Q96J66 1382 aa29.9■■■□□ 2.38
MSRB3-211ENST00000541897 TECPR2O15040 1411 aa29.9■■■□□ 2.38
MSRB3-211ENST00000541897 NBPF1Q3BBV0 1214 aa29.9■■■□□ 2.38
MSRB3-211ENST00000541897 TMEM132EQ6IEE7 984 aa29.9■■■□□ 2.38
MSRB3-211ENST00000541897 NKTRP30414 1462 aaKnown RBP29.89■■■□□ 2.38
MSRB3-211ENST00000541897 PHF23Q9BUL5 403 aaPredicted RBP29.89■■■□□ 2.38
MSRB3-211ENST00000541897 AMOTL2Q9Y2J4 779 aa29.89■■■□□ 2.38
MSRB3-211ENST00000541897 KNDC1Q76NI1 1749 aa29.87■■■□□ 2.37
MSRB3-211ENST00000541897 SIRT1Q96EB6 747 aa29.86■■■□□ 2.37
MSRB3-211ENST00000541897 PTCH1Q13635 1447 aa29.86■■■□□ 2.37
MSRB3-211ENST00000541897 DLC1Q96QB1 1528 aa29.85■■■□□ 2.37
MSRB3-211ENST00000541897 FAM135BQ49AJ0 1406 aa29.84■■■□□ 2.37
MSRB3-211ENST00000541897 ROBO1Q9Y6N7 1651 aa29.82■■■□□ 2.36
MSRB3-211ENST00000541897 CARD11Q9BXL7 1154 aa29.8■■■□□ 2.36
MSRB3-211ENST00000541897 STK26Q9P289 416 aa29.78■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms