RNA–Protein interactions for RNA: ENST00000541846.5

LMO3-228, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LMO3, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-228ENST00000541846 TMEM2Q9UHN6 1383 aa17.91■□□□□ 0.46
LMO3-228ENST00000541846 ZNF326Q5BKZ1 582 aaKnown RBP17.9■□□□□ 0.46
LMO3-228ENST00000541846 STAC3Q96MF2 364 aa17.9■□□□□ 0.46
LMO3-228ENST00000541846 ZNF142P52746 1687 aaPredicted RBP17.9■□□□□ 0.46
LMO3-228ENST00000541846 MYOM2P54296 1465 aa17.89■□□□□ 0.45
LMO3-228ENST00000541846 NBPF8Q3BBV2 869 aa17.89■□□□□ 0.45
LMO3-228ENST00000541846 LMTK3Q96Q04 1460 aa17.88■□□□□ 0.45
LMO3-228ENST00000541846 ARHGAP23Q9P227 1491 aa17.88■□□□□ 0.45
LMO3-228ENST00000541846 ZFYVE9O95405 1425 aa17.88■□□□□ 0.45
LMO3-228ENST00000541846 PRAG1Q86YV5 1406 aa17.88■□□□□ 0.45
LMO3-228ENST00000541846 SLIT1O75093 1534 aa17.87■□□□□ 0.45
LMO3-228ENST00000541846 TRPM1Q7Z4N2 1603 aa17.87■□□□□ 0.45
LMO3-228ENST00000541846 HDGFP51858 240 aaKnown RBP17.86■□□□□ 0.45
LMO3-228ENST00000541846 LTKP29376 864 aa17.85■□□□□ 0.45
LMO3-228ENST00000541846 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.85■□□□□ 0.45
LMO3-228ENST00000541846 NRXN1Q9ULB1 1477 aa17.84■□□□□ 0.45
LMO3-228ENST00000541846 RIMS2Q9UQ26 1411 aa17.84■□□□□ 0.45
LMO3-228ENST00000541846 VGFO15240 615 aaPredicted RBP17.84■□□□□ 0.45
LMO3-228ENST00000541846 RALGAPBQ86X10 1494 aa17.83■□□□□ 0.45
LMO3-228ENST00000541846 KIAA1210Q9ULL0 1709 aa17.83■□□□□ 0.44
LMO3-228ENST00000541846 ADGRF5Q8IZF2 1346 aa17.82■□□□□ 0.44
LMO3-228ENST00000541846 TXNDC2Q86VQ3 553 aa17.82■□□□□ 0.44
LMO3-228ENST00000541846 ANKLE2Q86XL3 938 aa17.82■□□□□ 0.44
LMO3-228ENST00000541846 HSPA2P54652 639 aa17.81■□□□□ 0.44
LMO3-228ENST00000541846 EID1Q9Y6B2 187 aa17.81■□□□□ 0.44
LMO3-228ENST00000541846 AEBP2Q6ZN18 517 aaPredicted RBP17.8■□□□□ 0.44
LMO3-228ENST00000541846 NUTM2DQ5VT03 806 aaPredicted RBP17.79■□□□□ 0.44
LMO3-228ENST00000541846 PIK3C2GO75747 1445 aa17.79■□□□□ 0.44
LMO3-228ENST00000541846 SCAF11Q99590 1463 aaKnown RBP17.77■□□□□ 0.44
LMO3-228ENST00000541846 LAMC1P11047 1609 aa17.77■□□□□ 0.44
LMO3-228ENST00000541846 PLEKHG1Q9ULL1 1385 aa17.77■□□□□ 0.43
LMO3-228ENST00000541846 MED14O60244 1454 aa17.76■□□□□ 0.43
LMO3-228ENST00000541846 NCKAP5LQ9HCH0 1330 aa17.75■□□□□ 0.43
LMO3-228ENST00000541846 NRXN3Q9Y4C0 1643 aa17.75■□□□□ 0.43
LMO3-228ENST00000541846 IQGAP1P46940 1657 aa17.74■□□□□ 0.43
LMO3-228ENST00000541846 C14orf93Q9H972 538 aaKnown RBP17.74■□□□□ 0.43
LMO3-228ENST00000541846 ROCK2O75116 1388 aaKnown RBP17.74■□□□□ 0.43
LMO3-228ENST00000541846 GPRASP1Q5JY77 1395 aa17.74■□□□□ 0.43
LMO3-228ENST00000541846 SETD1AO15047 1707 aaKnown RBP17.73■□□□□ 0.43
LMO3-228ENST00000541846 NBPF1Q3BBV0 1214 aa17.73■□□□□ 0.43
LMO3-228ENST00000541846 SETBP1Q9Y6X0 1596 aa17.73■□□□□ 0.43
LMO3-228ENST00000541846 CFAP70Q5T0N1 1121 aa17.72■□□□□ 0.43
LMO3-228ENST00000541846 ALKQ9UM73 1620 aa17.72■□□□□ 0.43
LMO3-228ENST00000541846 TBX22Q9Y458 520 aa17.71■□□□□ 0.43
LMO3-228ENST00000541846 POLR1AO95602 1720 aaPredicted RBP17.71■□□□□ 0.43
LMO3-228ENST00000541846 NPHP4O75161 1426 aaPredicted RBP17.71■□□□□ 0.43
LMO3-228ENST00000541846 ADAMTS13Q76LX8 1427 aa17.71■□□□□ 0.43
LMO3-228ENST00000541846 CARD11Q9BXL7 1154 aa17.7■□□□□ 0.42
LMO3-228ENST00000541846 ASXL1Q8IXJ9 1541 aa17.7■□□□□ 0.42
LMO3-228ENST00000541846 ADGRB1O14514 1584 aa17.7■□□□□ 0.42
LMO3-228ENST00000541846 SENP3Q9H4L4 574 aaPredicted RBP17.69■□□□□ 0.42
LMO3-228ENST00000541846 DMRT2Q9Y5R5 561 aa17.67■□□□□ 0.42
LMO3-228ENST00000541846 USP47Q96K76 1375 aa17.66■□□□□ 0.42
LMO3-228ENST00000541846 EIF4G2P78344 907 aaKnown RBP eCLIP17.66■□□□□ 0.42
LMO3-228ENST00000541846 HSPA5P11021 654 aaKnown RBP17.65■□□□□ 0.42
LMO3-228ENST00000541846 SLC26A8Q96RN1 970 aa17.65■□□□□ 0.42
LMO3-228ENST00000541846 STRCQ7RTU9 1775 aa17.64■□□□□ 0.41
LMO3-228ENST00000541846 BCANQ96GW7 911 aa17.64■□□□□ 0.41
LMO3-228ENST00000541846 PIK3R4Q99570 1358 aa17.64■□□□□ 0.41
LMO3-228ENST00000541846 TMEM132EQ6IEE7 984 aa17.63■□□□□ 0.41
LMO3-228ENST00000541846 METP08581 1390 aa17.63■□□□□ 0.41
LMO3-228ENST00000541846 DIP2AQ14689 1571 aa17.62■□□□□ 0.41
LMO3-228ENST00000541846 ARHGEF28Q8N1W1 1705 aaKnown RBP17.62■□□□□ 0.41
LMO3-228ENST00000541846 ZNF316A6NFI3 1004 aaPredicted RBP17.62■□□□□ 0.41
LMO3-228ENST00000541846 HIRIP3Q9BW71 556 aaPredicted RBP17.62■□□□□ 0.41
LMO3-228ENST00000541846 KNDC1Q76NI1 1749 aa17.59■□□□□ 0.41
LMO3-228ENST00000541846 YTHDC2Q9H6S0 1430 aaKnown RBP17.59■□□□□ 0.41
LMO3-228ENST00000541846 LRPPRCP42704 1394 aaKnown RBP17.58■□□□□ 0.4
LMO3-228ENST00000541846 ABCC11Q96J66 1382 aa17.58■□□□□ 0.4
LMO3-228ENST00000541846 SIRT1Q96EB6 747 aa17.58■□□□□ 0.4
LMO3-228ENST00000541846 PTPRUQ92729 1446 aa17.57■□□□□ 0.4
LMO3-228ENST00000541846 ST20-MTHFSA0A0A6YYL1 179 aa17.57■□□□□ 0.4
LMO3-228ENST00000541846 KCNA6P17658 529 aa17.57■□□□□ 0.4
LMO3-228ENST00000541846 EIF3AQ14152 1382 aaKnown RBP17.56■□□□□ 0.4
LMO3-228ENST00000541846 QRICH2Q9H0J4 1663 aa17.56■□□□□ 0.4
LMO3-228ENST00000541846 TRAK1Q9UPV9 953 aa17.56■□□□□ 0.4
LMO3-228ENST00000541846 AMOTL2Q9Y2J4 779 aa17.55■□□□□ 0.4
LMO3-228ENST00000541846 DLC1Q96QB1 1528 aa17.55■□□□□ 0.4
LMO3-228ENST00000541846 TECPR2O15040 1411 aa17.55■□□□□ 0.4
LMO3-228ENST00000541846 CHD2O14647 1828 aaKnown RBP17.54■□□□□ 0.4
LMO3-228ENST00000541846 STK26Q9P289 416 aa17.54■□□□□ 0.4
LMO3-228ENST00000541846 CPS1P31327 1500 aa17.53■□□□□ 0.4
LMO3-228ENST00000541846 XRN1Q8IZH2 1706 aaKnown RBP17.53■□□□□ 0.4
LMO3-228ENST00000541846 TESK2Q96S53 571 aa17.51■□□□□ 0.39
LMO3-228ENST00000541846 CENPJQ9HC77 1338 aaPredicted RBP17.5■□□□□ 0.39
LMO3-228ENST00000541846 PTCH1Q13635 1447 aa17.49■□□□□ 0.39
LMO3-228ENST00000541846 FAM135BQ49AJ0 1406 aa17.49■□□□□ 0.39
LMO3-228ENST00000541846 ROBO2Q9HCK4 1378 aa17.49■□□□□ 0.39
LMO3-228ENST00000541846 ZNF335Q9H4Z2 1342 aaPredicted RBP17.48■□□□□ 0.39
LMO3-228ENST00000541846 C11orf95C9JLR9 678 aaPredicted RBP17.48■□□□□ 0.39
LMO3-228ENST00000541846 SBNO2Q9Y2G9 1366 aa17.48■□□□□ 0.39
LMO3-228ENST00000541846 NWD1Q149M9 1564 aa17.48■□□□□ 0.39
LMO3-228ENST00000541846 PRAM1Q96QH2 718 aa17.46■□□□□ 0.39
LMO3-228ENST00000541846 NKTRP30414 1462 aaKnown RBP17.45■□□□□ 0.38
LMO3-228ENST00000541846 CCDC7Q96M83 1385 aa17.45■□□□□ 0.38
LMO3-228ENST00000541846 DISP3Q9P2K9 1392 aa17.45■□□□□ 0.38
LMO3-228ENST00000541846 PLEKHH1Q9ULM0 1364 aa17.45■□□□□ 0.38
LMO3-228ENST00000541846 WAPLQ7Z5K2 1190 aa17.45■□□□□ 0.38
LMO3-228ENST00000541846 WASHC2AQ641Q2 1341 aa17.45■□□□□ 0.38
LMO3-228ENST00000541846 POGKQ9P215 609 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 157.7 ms