RNA–Protein interactions for RNA: ENST00000541371.5

PRPF19-206, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 3

Gene PRPF19, Length 943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-206ENST00000541371 XIRP1Q702N8 1843 aaKnown RBP20.28■□□□□ 0.84
PRPF19-206ENST00000541371 CHGAP10645 457 aaKnown RBP20.28■□□□□ 0.84
PRPF19-206ENST00000541371 ITGAEP38570 1179 aa20.28■□□□□ 0.84
PRPF19-206ENST00000541371 RBM33Q96EV2 1170 aaKnown RBP20.28■□□□□ 0.84
PRPF19-206ENST00000541371 FAM135BQ49AJ0 1406 aa20.27■□□□□ 0.83
PRPF19-206ENST00000541371 RIMS2Q9UQ26 1411 aa20.26■□□□□ 0.83
PRPF19-206ENST00000541371 UNC13BO14795 1591 aa20.25■□□□□ 0.83
PRPF19-206ENST00000541371 PLEKHG1Q9ULL1 1385 aa20.25■□□□□ 0.83
PRPF19-206ENST00000541371 ZFYVE9O95405 1425 aa20.25■□□□□ 0.83
PRPF19-206ENST00000541371 GCC2Q8IWJ2 1684 aa20.24■□□□□ 0.83
PRPF19-206ENST00000541371 PPARGC1BQ86YN6 1023 aaKnown RBP20.24■□□□□ 0.83
PRPF19-206ENST00000541371 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.24■□□□□ 0.83
PRPF19-206ENST00000541371 NKTRP30414 1462 aaKnown RBP20.24■□□□□ 0.83
PRPF19-206ENST00000541371 NUP155O75694 1391 aa20.23■□□□□ 0.83
PRPF19-206ENST00000541371 MSH6P52701 1360 aa20.21■□□□□ 0.83
PRPF19-206ENST00000541371 TMEM131LA2VDJ0 1609 aa20.21■□□□□ 0.83
PRPF19-206ENST00000541371 TBX22Q9Y458 520 aa20.21■□□□□ 0.83
PRPF19-206ENST00000541371 NWD1Q149M9 1564 aa20.21■□□□□ 0.83
PRPF19-206ENST00000541371 NUTM2DQ5VT03 806 aaPredicted RBP20.2■□□□□ 0.82
PRPF19-206ENST00000541371 MYO5BQ9ULV0 1848 aa20.2■□□□□ 0.82
PRPF19-206ENST00000541371 E9PCH4 1651 aa20.19■□□□□ 0.82
PRPF19-206ENST00000541371 IQGAP3Q86VI3 1631 aa20.17■□□□□ 0.82
PRPF19-206ENST00000541371 SLAIN2Q9P270 581 aa20.17■□□□□ 0.82
PRPF19-206ENST00000541371 C14orf37Q86TY3 774 aa20.15■□□□□ 0.82
PRPF19-206ENST00000541371 ROBO1Q9Y6N7 1651 aa20.15■□□□□ 0.82
PRPF19-206ENST00000541371 CHD2O14647 1828 aaKnown RBP20.13■□□□□ 0.81
PRPF19-206ENST00000541371 ADAMTS13Q76LX8 1427 aa20.12■□□□□ 0.81
PRPF19-206ENST00000541371 RGS17Q9UGC6 210 aaPredicted RBP20.12■□□□□ 0.81
PRPF19-206ENST00000541371 NCOA3Q9Y6Q9 1424 aa20.11■□□□□ 0.81
PRPF19-206ENST00000541371 PIK3R4Q99570 1358 aa20.1■□□□□ 0.81
PRPF19-206ENST00000541371 DIP2AQ14689 1571 aa20.08■□□□□ 0.81
PRPF19-206ENST00000541371 ZNF326Q5BKZ1 582 aaKnown RBP20.08■□□□□ 0.81
PRPF19-206ENST00000541371 C19orf44Q9H6X5 657 aa20.08■□□□□ 0.81
PRPF19-206ENST00000541371 AMOTL2Q9Y2J4 779 aa20.08■□□□□ 0.81
PRPF19-206ENST00000541371 ATF3P18847 181 aa20.07■□□□□ 0.8
PRPF19-206ENST00000541371 CADPS2Q86UW7 1296 aa20.07■□□□□ 0.8
PRPF19-206ENST00000541371 TRPM2O94759 1503 aa20.05■□□□□ 0.8
PRPF19-206ENST00000541371 JCADQ9P266 1359 aa20.05■□□□□ 0.8
PRPF19-206ENST00000541371 PHLPP1O60346 1717 aa20.04■□□□□ 0.8
PRPF19-206ENST00000541371 POTEAQ6S8J7 498 aa20.02■□□□□ 0.8
PRPF19-206ENST00000541371 SPHKAPQ2M3C7 1700 aa20.02■□□□□ 0.79
PRPF19-206ENST00000541371 PTPRUQ92729 1446 aa20.02■□□□□ 0.79
PRPF19-206ENST00000541371 RRBP1Q9P2E9 1410 aaKnown RBP20.02■□□□□ 0.79
PRPF19-206ENST00000541371 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.99■□□□□ 0.79
PRPF19-206ENST00000541371 TRIM52Q96A61 297 aa19.98■□□□□ 0.79
PRPF19-206ENST00000541371 NAIPQ13075 1403 aa19.98■□□□□ 0.79
PRPF19-206ENST00000541371 SETBP1Q9Y6X0 1596 aa19.97■□□□□ 0.79
PRPF19-206ENST00000541371 SPATA31A6Q5VVP1 1343 aa19.96■□□□□ 0.79
PRPF19-206ENST00000541371 METP08581 1390 aa19.95■□□□□ 0.79
PRPF19-206ENST00000541371 COL16A1Q07092 1604 aaPredicted RBP19.95■□□□□ 0.78
PRPF19-206ENST00000541371 NRXN3Q9Y4C0 1643 aa19.95■□□□□ 0.78
PRPF19-206ENST00000541371 MEX3CQ5U5Q3 659 aaKnown RBP19.95■□□□□ 0.78
PRPF19-206ENST00000541371 BRINP3Q76B58 766 aa19.95■□□□□ 0.78
PRPF19-206ENST00000541371 CLTCL1P53675 1640 aa19.94■□□□□ 0.78
PRPF19-206ENST00000541371 DCCP43146 1447 aa19.93■□□□□ 0.78
PRPF19-206ENST00000541371 AHDC1Q5TGY3 1603 aaPredicted RBP19.92■□□□□ 0.78
PRPF19-206ENST00000541371 XRN1Q8IZH2 1706 aaKnown RBP19.92■□□□□ 0.78
PRPF19-206ENST00000541371 VGFO15240 615 aaPredicted RBP19.91■□□□□ 0.78
PRPF19-206ENST00000541371 SLC4A1APQ9BWU0 796 aaKnown RBP19.91■□□□□ 0.78
PRPF19-206ENST00000541371 NEXMIFQ5QGS0 1516 aa19.91■□□□□ 0.78
PRPF19-206ENST00000541371 HFM1A2PYH4 1435 aa19.9■□□□□ 0.78
PRPF19-206ENST00000541371 KIF1BO60333 1816 aa19.88■□□□□ 0.77
PRPF19-206ENST00000541371 ZNF772Q68DY9 489 aaPredicted RBP19.88■□□□□ 0.77
PRPF19-206ENST00000541371 LRP6O75581 1613 aa19.87■□□□□ 0.77
PRPF19-206ENST00000541371 MST1RQ04912 1400 aa19.87■□□□□ 0.77
PRPF19-206ENST00000541371 NUTM2BA6NNL0 878 aaPredicted RBP19.87■□□□□ 0.77
PRPF19-206ENST00000541371 NUTM2EB1AL46 878 aaPredicted RBP19.87■□□□□ 0.77
PRPF19-206ENST00000541371 NUTM2AQ8IVF1 878 aaPredicted RBP19.87■□□□□ 0.77
PRPF19-206ENST00000541371 ADGRL3Q9HAR2 1447 aa19.86■□□□□ 0.77
PRPF19-206ENST00000541371 RPGRIP1LQ68CZ1 1315 aa19.86■□□□□ 0.77
PRPF19-206ENST00000541371 ASXL1Q8IXJ9 1541 aa19.86■□□□□ 0.77
PRPF19-206ENST00000541371 SHPRHQ149N8 1683 aa19.84■□□□□ 0.77
PRPF19-206ENST00000541371 LRRC59Q96AG4 307 aaKnown RBP19.84■□□□□ 0.77
PRPF19-206ENST00000541371 SETD5Q9C0A6 1442 aa19.82■□□□□ 0.76
PRPF19-206ENST00000541371 FOXD1Q16676 465 aa19.8■□□□□ 0.76
PRPF19-206ENST00000541371 DDX17Q92841 729 aaKnown RBP19.8■□□□□ 0.76
PRPF19-206ENST00000541371 ROBO2Q9HCK4 1378 aa19.8■□□□□ 0.76
PRPF19-206ENST00000541371 PTCH1Q13635 1447 aa19.79■□□□□ 0.76
PRPF19-206ENST00000541371 NHSL1Q5SYE7 1610 aa19.77■□□□□ 0.76
PRPF19-206ENST00000541371 NALCNQ8IZF0 1738 aa19.77■□□□□ 0.76
PRPF19-206ENST00000541371 RXRBP28702 533 aa19.77■□□□□ 0.76
PRPF19-206ENST00000541371 C1orf167Q5SNV9 1468 aa19.77■□□□□ 0.76
PRPF19-206ENST00000541371 SETD1AO15047 1707 aaKnown RBP19.76■□□□□ 0.75
PRPF19-206ENST00000541371 AFF2P51816 1311 aa19.76■□□□□ 0.75
PRPF19-206ENST00000541371 CCDC144AA2RUR9 1427 aa19.75■□□□□ 0.75
PRPF19-206ENST00000541371 PNPLA6Q8IY17 1366 aa19.74■□□□□ 0.75
PRPF19-206ENST00000541371 RGL3Q3MIN7 710 aa19.74■□□□□ 0.75
PRPF19-206ENST00000541371 C8orf37Q96NL8 207 aa19.74■□□□□ 0.75
PRPF19-206ENST00000541371 ORAI2Q96SN7 254 aa19.74■□□□□ 0.75
PRPF19-206ENST00000541371 MPHOSPH9Q99550 1183 aa19.73■□□□□ 0.75
PRPF19-206ENST00000541371 PPLO60437 1756 aa19.72■□□□□ 0.75
PRPF19-206ENST00000541371 PRAG1Q86YV5 1406 aa19.72■□□□□ 0.75
PRPF19-206ENST00000541371 ADGRF5Q8IZF2 1346 aa19.71■□□□□ 0.75
PRPF19-206ENST00000541371 SOS2Q07890 1332 aaPredicted RBP19.7■□□□□ 0.74
PRPF19-206ENST00000541371 ADAMTS2O95450 1211 aa19.69■□□□□ 0.74
PRPF19-206ENST00000541371 NGLY1Q96IV0 654 aa19.69■□□□□ 0.74
PRPF19-206ENST00000541371 STK26Q9P289 416 aa19.69■□□□□ 0.74
PRPF19-206ENST00000541371 ANKRD30BQ9BXX2 1392 aa19.69■□□□□ 0.74
PRPF19-206ENST00000541371 UPF1Q92900 1129 aaKnown RBP eCLIP19.68■□□□□ 0.74
PRPF19-206ENST00000541371 QTRT2Q9H974 415 aaKnown RBP19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms