RNA–Protein interactions for RNA: ENST00000541110.5

TRERF1-205, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 7,646 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-205ENST00000541110 ATF3P18847 181 aa12.23□□□□□ -0.45
TRERF1-205ENST00000541110 ANKRD45Q5TZF3 282 aa12.23□□□□□ -0.45
TRERF1-205ENST00000541110 RDXP35241 583 aaKnown RBP12.22□□□□□ -0.45
TRERF1-205ENST00000541110 COG3Q96JB2 828 aa12.22□□□□□ -0.45
TRERF1-205ENST00000541110 SPDYE4A6NLX3 237 aa12.22□□□□□ -0.45
TRERF1-205ENST00000541110 FAM177BA6PVY3 158 aa12.22□□□□□ -0.45
TRERF1-205ENST00000541110 WASHC2AQ641Q2 1341 aa12.21□□□□□ -0.45
TRERF1-205ENST00000541110 IFIT2P09913 472 aaKnown RBP12.21□□□□□ -0.45
TRERF1-205ENST00000541110 HOMER1Q86YM7 354 aa12.21□□□□□ -0.45
TRERF1-205ENST00000541110 ATP2B2Q01814 1243 aa12.21□□□□□ -0.45
TRERF1-205ENST00000541110 TRAK1Q9UPV9 953 aa12.21□□□□□ -0.45
TRERF1-205ENST00000541110 RRP7AQ9Y3A4 280 aaKnown RBP12.21□□□□□ -0.45
TRERF1-205ENST00000541110 OFD1O75665 1012 aa12.2□□□□□ -0.46
TRERF1-205ENST00000541110 AK7Q96M32 723 aa12.2□□□□□ -0.46
TRERF1-205ENST00000541110 DCAF1Q9Y4B6 1507 aa12.2□□□□□ -0.46
TRERF1-205ENST00000541110 CEP162Q5TB80 1403 aa12.19□□□□□ -0.46
TRERF1-205ENST00000541110 DDX58O95786 925 aaKnown RBP12.19□□□□□ -0.46
TRERF1-205ENST00000541110 MAP7D2Q96T17 732 aa12.19□□□□□ -0.46
TRERF1-205ENST00000541110 BCL11BQ9C0K0 894 aaPredicted RBP12.19□□□□□ -0.46
TRERF1-205ENST00000541110 BRMS1Q9HCU9 246 aa12.19□□□□□ -0.46
TRERF1-205ENST00000541110 ATP6V1DQ9Y5K8 247 aa12.19□□□□□ -0.46
TRERF1-205ENST00000541110 RUFY2Q8WXA3 655 aa12.19□□□□□ -0.46
TRERF1-205ENST00000541110 CENPJQ9HC77 1338 aaPredicted RBP12.19□□□□□ -0.46
TRERF1-205ENST00000541110 SAFBQ15424 915 aaKnown RBP eCLIP12.18□□□□□ -0.46
TRERF1-205ENST00000541110 CCDC173Q0VFZ6 552 aa12.18□□□□□ -0.46
TRERF1-205ENST00000541110 CARMIL2Q6F5E8 1435 aa12.18□□□□□ -0.46
TRERF1-205ENST00000541110 SYCP1Q15431 976 aa12.18□□□□□ -0.46
TRERF1-205ENST00000541110 PAXIP1Q6ZW49 1069 aaPredicted RBP12.18□□□□□ -0.46
TRERF1-205ENST00000541110 RBM5P52756 815 aaKnown RBP eCLIP12.17□□□□□ -0.46
TRERF1-205ENST00000541110 NEFHP12036 1026 aa12.17□□□□□ -0.46
TRERF1-205ENST00000541110 CDR1P51861 262 aa12.17□□□□□ -0.46
TRERF1-205ENST00000541110 BICD2Q8TD16 824 aa12.17□□□□□ -0.46
TRERF1-205ENST00000541110 ANKRD62A6NC57 917 aa12.16□□□□□ -0.46
TRERF1-205ENST00000541110 G3BP1Q13283 466 aaKnown RBP eCLIP12.16□□□□□ -0.46
TRERF1-205ENST00000541110 TTLL5Q6EMB2 1281 aa12.16□□□□□ -0.46
TRERF1-205ENST00000541110 ZNF771Q7L3S4 317 aaPredicted RBP12.16□□□□□ -0.46
TRERF1-205ENST00000541110 HSPA5P11021 654 aaKnown RBP12.16□□□□□ -0.46
TRERF1-205ENST00000541110 MATR3P43243 847 aaKnown RBP eCLIP12.16□□□□□ -0.46
TRERF1-205ENST00000541110 AIMP1Q12904 312 aaKnown RBP12.16□□□□□ -0.46
TRERF1-205ENST00000541110 NEUROD6Q96NK8 337 aa12.16□□□□□ -0.46
TRERF1-205ENST00000541110 WASHC4Q2M389 1173 aa12.16□□□□□ -0.46
TRERF1-205ENST00000541110 CDK5RAP3Q96JB5 506 aa12.16□□□□□ -0.46
TRERF1-205ENST00000541110 EFCAB2Q5VUJ9 269 aa12.16□□□□□ -0.46
TRERF1-205ENST00000541110 ZKSCAN1P17029 563 aaPredicted RBP12.16□□□□□ -0.46
TRERF1-205ENST00000541110 NUP155O75694 1391 aa12.15□□□□□ -0.46
TRERF1-205ENST00000541110 RIC3Q7Z5B4 369 aa12.15□□□□□ -0.46
TRERF1-205ENST00000541110 MPHOSPH10O00566 681 aaKnown RBP12.15□□□□□ -0.46
TRERF1-205ENST00000541110 MYCNP04198 464 aaPredicted RBP12.15□□□□□ -0.46
TRERF1-205ENST00000541110 TMEM87AQ8NBN3 555 aa12.15□□□□□ -0.46
TRERF1-205ENST00000541110 CAGE1Q8TC20 777 aa12.15□□□□□ -0.46
TRERF1-205ENST00000541110 PRDM2Q13029 1718 aa12.15□□□□□ -0.46
TRERF1-205ENST00000541110 HNRNPMP52272 730 aaKnown RBP eCLIP12.15□□□□□ -0.46
TRERF1-205ENST00000541110 FHAD1B1AJZ9 1412 aa12.15□□□□□ -0.46
TRERF1-205ENST00000541110 NUTM2BA6NNL0 878 aaPredicted RBP12.15□□□□□ -0.46
TRERF1-205ENST00000541110 NUTM2EB1AL46 878 aaPredicted RBP12.15□□□□□ -0.46
TRERF1-205ENST00000541110 NUTM2AQ8IVF1 878 aaPredicted RBP12.15□□□□□ -0.46
TRERF1-205ENST00000541110 ARHGAP35Q9NRY4 1499 aa12.15□□□□□ -0.47
TRERF1-205ENST00000541110 NEBLO76041 1014 aa12.14□□□□□ -0.47
TRERF1-205ENST00000541110 ZRSR2Q15696 482 aaKnown RBP12.14□□□□□ -0.47
TRERF1-205ENST00000541110 CHMP4BP1P59074 171 aa12.14□□□□□ -0.47
TRERF1-205ENST00000541110 RALBP1Q15311 655 aa12.14□□□□□ -0.47
TRERF1-205ENST00000541110 BCL2L13Q9BXK5 485 aa12.14□□□□□ -0.47
TRERF1-205ENST00000541110 TEX35Q5T0J7 233 aa12.14□□□□□ -0.47
TRERF1-205ENST00000541110 RALYLQ86SE5 291 aaKnown RBP12.13□□□□□ -0.47
TRERF1-205ENST00000541110 MYO6Q9UM54 1294 aa12.13□□□□□ -0.47
TRERF1-205ENST00000541110 XBP1P17861 261 aa12.13□□□□□ -0.47
TRERF1-205ENST00000541110 PDILTQ8N807 584 aa12.13□□□□□ -0.47
TRERF1-205ENST00000541110 KIF6Q6ZMV9 814 aa12.13□□□□□ -0.47
TRERF1-205ENST00000541110 KRT18P05783 430 aaKnown RBP12.13□□□□□ -0.47
TRERF1-205ENST00000541110 RNF20Q5VTR2 975 aa12.13□□□□□ -0.47
TRERF1-205ENST00000541110 SEPT7Q16181 437 aaKnown RBP12.12□□□□□ -0.47
TRERF1-205ENST00000541110 PIP4K2BP78356 416 aa12.12□□□□□ -0.47
TRERF1-205ENST00000541110 DDX49Q9Y6V7 483 aaKnown RBP12.12□□□□□ -0.47
TRERF1-205ENST00000541110 CYB5RLQ6IPT4 315 aa12.12□□□□□ -0.47
TRERF1-205ENST00000541110 SASS6Q6UVJ0 657 aa12.12□□□□□ -0.47
TRERF1-205ENST00000541110 STK11IPQ8N1F8 1099 aa12.11□□□□□ -0.47
TRERF1-205ENST00000541110 RAPGEF4Q8WZA2 1011 aa12.11□□□□□ -0.47
TRERF1-205ENST00000541110 OLFM4Q6UX06 510 aa12.11□□□□□ -0.47
TRERF1-205ENST00000541110 DDX11L8A8MPP1 907 aa12.11□□□□□ -0.47
TRERF1-205ENST00000541110 NUTM2GQ5VZR2 741 aa12.11□□□□□ -0.47
TRERF1-205ENST00000541110 SLC3A2P08195 630 aaKnown RBP12.1□□□□□ -0.47
TRERF1-205ENST00000541110 PLCD4Q9BRC7 762 aa12.1□□□□□ -0.47
TRERF1-205ENST00000541110 STRN4Q9NRL3 753 aa12.1□□□□□ -0.47
TRERF1-205ENST00000541110 MINK1Q8N4C8 1332 aaPredicted RBP12.1□□□□□ -0.47
TRERF1-205ENST00000541110 PDCL3Q9H2J4 239 aa12.1□□□□□ -0.47
TRERF1-205ENST00000541110 HSP90AB4PQ58FF6 505 aa12.1□□□□□ -0.47
TRERF1-205ENST00000541110 VPS37CA5D8V6 355 aaPredicted RBP12.09□□□□□ -0.47
TRERF1-205ENST00000541110 WRNQ14191 1432 aaPredicted RBP eCLIP12.09□□□□□ -0.47
TRERF1-205ENST00000541110 ZHX3Q9H4I2 956 aa12.09□□□□□ -0.47
TRERF1-205ENST00000541110 CEP164Q9UPV0 1460 aa12.09□□□□□ -0.47
TRERF1-205ENST00000541110 RBM42Q9BTD8 480 aaKnown RBP12.09□□□□□ -0.47
TRERF1-205ENST00000541110 EEA1Q15075 1411 aa12.09□□□□□ -0.47
TRERF1-205ENST00000541110 FKBP5Q13451 457 aaPredicted RBP12.08□□□□□ -0.48
TRERF1-205ENST00000541110 CCDC191Q8NCU4 936 aa12.08□□□□□ -0.48
TRERF1-205ENST00000541110 MAGEC2Q9UBF1 373 aaPredicted RBP12.08□□□□□ -0.48
TRERF1-205ENST00000541110 DCTN1Q14203 1278 aa12.08□□□□□ -0.48
TRERF1-205ENST00000541110 PLCD3Q8N3E9 789 aa12.08□□□□□ -0.48
TRERF1-205ENST00000541110 NLRP2Q9NX02 1062 aa12.07□□□□□ -0.48
TRERF1-205ENST00000541110 BRPF1P55201 1214 aaPredicted RBP12.07□□□□□ -0.48
TRERF1-205ENST00000541110 ANKRD30AQ9BXX3 1397 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms