RNA–Protein interactions for RNA: ENST00000541081.1

TM7SF3-209, Transcript of transmembrane 7 superfamily member 3, humanhuman

TSL 4

Gene TM7SF3, Length 516 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM7SF3-209ENST00000541081 NUP155O75694 1391 aa14.03□□□□□ -0.16
TM7SF3-209ENST00000541081 ADGRB3O60242 1522 aa14.03□□□□□ -0.16
TM7SF3-209ENST00000541081 E9PCH4 1651 aa14.03□□□□□ -0.16
TM7SF3-209ENST00000541081 TMEM2Q9UHN6 1383 aa14.02□□□□□ -0.17
TM7SF3-209ENST00000541081 UBAP1LF5GYI3 381 aa14.02□□□□□ -0.17
TM7SF3-209ENST00000541081 LTKP29376 864 aa14.01□□□□□ -0.17
TM7SF3-209ENST00000541081 MYO5BQ9ULV0 1848 aa14□□□□□ -0.17
TM7SF3-209ENST00000541081 STRCP1A6NGW2 1772 aa13.99□□□□□ -0.17
TM7SF3-209ENST00000541081 CHGAP10645 457 aaKnown RBP13.98□□□□□ -0.17
TM7SF3-209ENST00000541081 NAIPQ13075 1403 aa13.97□□□□□ -0.17
TM7SF3-209ENST00000541081 TMEM131LA2VDJ0 1609 aa13.97□□□□□ -0.17
TM7SF3-209ENST00000541081 C1QBPQ07021 282 aaKnown RBP13.96□□□□□ -0.17
TM7SF3-209ENST00000541081 BCANQ96GW7 911 aa13.96□□□□□ -0.17
TM7SF3-209ENST00000541081 SPHKAPQ2M3C7 1700 aa13.95□□□□□ -0.18
TM7SF3-209ENST00000541081 TOM1O60784 492 aa13.95□□□□□ -0.18
TM7SF3-209ENST00000541081 HDGFP51858 240 aaKnown RBP13.95□□□□□ -0.18
TM7SF3-209ENST00000541081 PPP1R15AO75807 674 aaPredicted RBP13.94□□□□□ -0.18
TM7SF3-209ENST00000541081 HFM1A2PYH4 1435 aa13.93□□□□□ -0.18
TM7SF3-209ENST00000541081 RIMS2Q9UQ26 1411 aa13.93□□□□□ -0.18
TM7SF3-209ENST00000541081 SLC26A8Q96RN1 970 aa13.93□□□□□ -0.18
TM7SF3-209ENST00000541081 LRRC7Q96NW7 1537 aa13.93□□□□□ -0.18
TM7SF3-209ENST00000541081 PIP4K2BP78356 416 aa13.92□□□□□ -0.18
TM7SF3-209ENST00000541081 TRIM52Q96A61 297 aa13.92□□□□□ -0.18
TM7SF3-209ENST00000541081 ZFYVE9O95405 1425 aa13.91□□□□□ -0.18
TM7SF3-209ENST00000541081 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.9□□□□□ -0.18
TM7SF3-209ENST00000541081 PLEKHG1Q9ULL1 1385 aa13.89□□□□□ -0.19
TM7SF3-209ENST00000541081 XIRP1Q702N8 1843 aaKnown RBP13.88□□□□□ -0.19
TM7SF3-209ENST00000541081 NUTM2DQ5VT03 806 aaPredicted RBP13.88□□□□□ -0.19
TM7SF3-209ENST00000541081 KCNA6P17658 529 aa13.87□□□□□ -0.19
TM7SF3-209ENST00000541081 KCNA4P22459 653 aa13.87□□□□□ -0.19
TM7SF3-209ENST00000541081 CLTCL1P53675 1640 aa13.86□□□□□ -0.19
TM7SF3-209ENST00000541081 TRPM2O94759 1503 aa13.86□□□□□ -0.19
TM7SF3-209ENST00000541081 KIF1BO60333 1816 aa13.86□□□□□ -0.19
TM7SF3-209ENST00000541081 ZNF326Q5BKZ1 582 aaKnown RBP13.86□□□□□ -0.19
TM7SF3-209ENST00000541081 NWD1Q149M9 1564 aa13.86□□□□□ -0.19
TM7SF3-209ENST00000541081 PROSER2Q86WR7 435 aaPredicted RBP13.85□□□□□ -0.19
TM7SF3-209ENST00000541081 SLC4A1APQ9BWU0 796 aaKnown RBP13.85□□□□□ -0.19
TM7SF3-209ENST00000541081 NKTRP30414 1462 aaKnown RBP13.85□□□□□ -0.19
TM7SF3-209ENST00000541081 CHD2O14647 1828 aaKnown RBP13.85□□□□□ -0.19
TM7SF3-209ENST00000541081 DIP2AQ14689 1571 aa13.84□□□□□ -0.19
TM7SF3-209ENST00000541081 ALKQ9UM73 1620 aa13.84□□□□□ -0.19
TM7SF3-209ENST00000541081 TMEM94Q12767 1356 aa13.83□□□□□ -0.19
TM7SF3-209ENST00000541081 DISP3Q9P2K9 1392 aa13.83□□□□□ -0.19
TM7SF3-209ENST00000541081 HSPA1LP34931 641 aa13.83□□□□□ -0.2
TM7SF3-209ENST00000541081 TBX22Q9Y458 520 aa13.83□□□□□ -0.2
TM7SF3-209ENST00000541081 RBM33Q96EV2 1170 aaKnown RBP13.81□□□□□ -0.2
TM7SF3-209ENST00000541081 ADAMTS13Q76LX8 1427 aa13.81□□□□□ -0.2
TM7SF3-209ENST00000541081 PIK3R4Q99570 1358 aa13.79□□□□□ -0.2
TM7SF3-209ENST00000541081 NEXMIFQ5QGS0 1516 aa13.79□□□□□ -0.2
TM7SF3-209ENST00000541081 MSH6P52701 1360 aa13.78□□□□□ -0.2
TM7SF3-209ENST00000541081 SETBP1Q9Y6X0 1596 aa13.78□□□□□ -0.2
TM7SF3-209ENST00000541081 NRXN3Q9Y4C0 1643 aa13.78□□□□□ -0.2
TM7SF3-209ENST00000541081 C14orf37Q86TY3 774 aa13.77□□□□□ -0.21
TM7SF3-209ENST00000541081 ACIN1Q9UKV3 1341 aaKnown RBP13.77□□□□□ -0.21
TM7SF3-209ENST00000541081 SETD5Q9C0A6 1442 aa13.76□□□□□ -0.21
TM7SF3-209ENST00000541081 MPHOSPH9Q99550 1183 aa13.76□□□□□ -0.21
TM7SF3-209ENST00000541081 AMOTL2Q9Y2J4 779 aa13.75□□□□□ -0.21
TM7SF3-209ENST00000541081 ROBO1Q9Y6N7 1651 aa13.75□□□□□ -0.21
TM7SF3-209ENST00000541081 CCDC144AA2RUR9 1427 aa13.74□□□□□ -0.21
TM7SF3-209ENST00000541081 VGFO15240 615 aaPredicted RBP13.74□□□□□ -0.21
TM7SF3-209ENST00000541081 FAM135BQ49AJ0 1406 aa13.73□□□□□ -0.21
TM7SF3-209ENST00000541081 NCOA3Q9Y6Q9 1424 aa13.73□□□□□ -0.21
TM7SF3-209ENST00000541081 PPLO60437 1756 aa13.73□□□□□ -0.21
TM7SF3-209ENST00000541081 XRN1Q8IZH2 1706 aaKnown RBP13.73□□□□□ -0.21
TM7SF3-209ENST00000541081 PTPRUQ92729 1446 aa13.73□□□□□ -0.21
TM7SF3-209ENST00000541081 RPGRIP1LQ68CZ1 1315 aa13.72□□□□□ -0.21
TM7SF3-209ENST00000541081 MED1Q15648 1581 aaPredicted RBP13.72□□□□□ -0.21
TM7SF3-209ENST00000541081 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.72□□□□□ -0.21
TM7SF3-209ENST00000541081 RAB3GAP2Q9H2M9 1393 aa13.71□□□□□ -0.21
TM7SF3-209ENST00000541081 SLAIN2Q9P270 581 aa13.71□□□□□ -0.21
TM7SF3-209ENST00000541081 METP08581 1390 aa13.71□□□□□ -0.22
TM7SF3-209ENST00000541081 ATF3P18847 181 aa13.69□□□□□ -0.22
TM7SF3-209ENST00000541081 RGL3Q3MIN7 710 aa13.69□□□□□ -0.22
TM7SF3-209ENST00000541081 CADPS2Q86UW7 1296 aa13.69□□□□□ -0.22
TM7SF3-209ENST00000541081 C19orf44Q9H6X5 657 aa13.69□□□□□ -0.22
TM7SF3-209ENST00000541081 SETD1AO15047 1707 aaKnown RBP13.68□□□□□ -0.22
TM7SF3-209ENST00000541081 PHLPP1O60346 1717 aa13.67□□□□□ -0.22
TM7SF3-209ENST00000541081 ILDR2Q71H61 639 aa13.67□□□□□ -0.22
TM7SF3-209ENST00000541081 IFT172Q9UG01 1749 aa13.67□□□□□ -0.22
TM7SF3-209ENST00000541081 SPATA31E1Q6ZUB1 1445 aa13.65□□□□□ -0.22
TM7SF3-209ENST00000541081 ANKRD30BQ9BXX2 1392 aa13.65□□□□□ -0.22
TM7SF3-209ENST00000541081 DCCP43146 1447 aa13.64□□□□□ -0.23
TM7SF3-209ENST00000541081 NALCNQ8IZF0 1738 aa13.64□□□□□ -0.23
TM7SF3-209ENST00000541081 ADGRL3Q9HAR2 1447 aa13.63□□□□□ -0.23
TM7SF3-209ENST00000541081 ADGRF5Q8IZF2 1346 aa13.63□□□□□ -0.23
TM7SF3-209ENST00000541081 U3KPZ7 1027 aaPredicted RBP13.62□□□□□ -0.23
TM7SF3-209ENST00000541081 PTCH1Q13635 1447 aa13.62□□□□□ -0.23
TM7SF3-209ENST00000541081 COL16A1Q07092 1604 aaPredicted RBP13.6□□□□□ -0.23
TM7SF3-209ENST00000541081 MST1RQ04912 1400 aa13.59□□□□□ -0.23
TM7SF3-209ENST00000541081 HRCP23327 699 aa13.59□□□□□ -0.23
TM7SF3-209ENST00000541081 AHDC1Q5TGY3 1603 aaPredicted RBP13.59□□□□□ -0.23
TM7SF3-209ENST00000541081 ROBO2Q9HCK4 1378 aa13.58□□□□□ -0.23
TM7SF3-209ENST00000541081 JCADQ9P266 1359 aa13.58□□□□□ -0.23
TM7SF3-209ENST00000541081 PIK3C2GO75747 1445 aa13.58□□□□□ -0.24
TM7SF3-209ENST00000541081 PRAG1Q86YV5 1406 aa13.58□□□□□ -0.24
TM7SF3-209ENST00000541081 BRINP3Q76B58 766 aa13.58□□□□□ -0.24
TM7SF3-209ENST00000541081 STK26Q9P289 416 aa13.58□□□□□ -0.24
TM7SF3-209ENST00000541081 ASXL1Q8IXJ9 1541 aa13.58□□□□□ -0.24
TM7SF3-209ENST00000541081 LAMC1P11047 1609 aa13.57□□□□□ -0.24
TM7SF3-209ENST00000541081 KNDC1Q76NI1 1749 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms