RNA–Protein interactions for RNA: ENST00000540803.1

RAB35-204, Transcript of RAB35, member RAS oncogene family, humanhuman

TSL 2

Gene RAB35, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB35-204ENST00000540803 CLTCL1P53675 1640 aa28.76■■■□□ 2.19
RAB35-204ENST00000540803 PLEKHG1Q9ULL1 1385 aa28.75■■■□□ 2.19
RAB35-204ENST00000540803 HDGFP51858 240 aaKnown RBP28.73■■■□□ 2.19
RAB35-204ENST00000540803 SLC26A8Q96RN1 970 aa28.73■■■□□ 2.19
RAB35-204ENST00000540803 PPP1R15AO75807 674 aaPredicted RBP28.71■■■□□ 2.19
RAB35-204ENST00000540803 SLC4A1APQ9BWU0 796 aaKnown RBP28.71■■■□□ 2.19
RAB35-204ENST00000540803 XIRP1Q702N8 1843 aaKnown RBP28.71■■■□□ 2.19
RAB35-204ENST00000540803 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.7■■■□□ 2.18
RAB35-204ENST00000540803 KIF1BO60333 1816 aa28.69■■■□□ 2.18
RAB35-204ENST00000540803 SENP3Q9H4L4 574 aaPredicted RBP28.69■■■□□ 2.18
RAB35-204ENST00000540803 NUTM2DQ5VT03 806 aaPredicted RBP28.68■■■□□ 2.18
RAB35-204ENST00000540803 BCANQ96GW7 911 aa28.68■■■□□ 2.18
RAB35-204ENST00000540803 NWD1Q149M9 1564 aa28.67■■■□□ 2.18
RAB35-204ENST00000540803 ALKQ9UM73 1620 aa28.67■■■□□ 2.18
RAB35-204ENST00000540803 KCNA6P17658 529 aa28.65■■■□□ 2.18
RAB35-204ENST00000540803 CHD2O14647 1828 aaKnown RBP28.64■■■□□ 2.18
RAB35-204ENST00000540803 SETD5Q9C0A6 1442 aa28.64■■■□□ 2.18
RAB35-204ENST00000540803 ADAMTS13Q76LX8 1427 aa28.63■■■□□ 2.17
RAB35-204ENST00000540803 TOM1O60784 492 aa28.63■■■□□ 2.17
RAB35-204ENST00000540803 DIP2AQ14689 1571 aa28.62■■■□□ 2.17
RAB35-204ENST00000540803 NEXMIFQ5QGS0 1516 aa28.6■■■□□ 2.17
RAB35-204ENST00000540803 ZNF326Q5BKZ1 582 aaKnown RBP28.6■■■□□ 2.17
RAB35-204ENST00000540803 NKTRP30414 1462 aaKnown RBP28.59■■■□□ 2.17
RAB35-204ENST00000540803 FOXD1Q16676 465 aa28.59■■■□□ 2.17
RAB35-204ENST00000540803 TBX22Q9Y458 520 aa28.59■■■□□ 2.17
RAB35-204ENST00000540803 NRXN3Q9Y4C0 1643 aa28.58■■■□□ 2.17
RAB35-204ENST00000540803 MPHOSPH9Q99550 1183 aa28.58■■■□□ 2.17
RAB35-204ENST00000540803 PIP4K2BP78356 416 aa28.57■■■□□ 2.16
RAB35-204ENST00000540803 TMEM94Q12767 1356 aa28.56■■■□□ 2.16
RAB35-204ENST00000540803 SETBP1Q9Y6X0 1596 aa28.56■■■□□ 2.16
RAB35-204ENST00000540803 SCAF1Q9H7N4 1312 aaKnown RBP28.55■■■□□ 2.16
RAB35-204ENST00000540803 RAB3GAP2Q9H2M9 1393 aa28.54■■■□□ 2.16
RAB35-204ENST00000540803 ACIN1Q9UKV3 1341 aaKnown RBP28.53■■■□□ 2.16
RAB35-204ENST00000540803 PROSER2Q86WR7 435 aaPredicted RBP28.52■■■□□ 2.16
RAB35-204ENST00000540803 PIK3R4Q99570 1358 aa28.51■■■□□ 2.16
RAB35-204ENST00000540803 RBM33Q96EV2 1170 aaKnown RBP28.5■■■□□ 2.15
RAB35-204ENST00000540803 PPLO60437 1756 aa28.48■■■□□ 2.15
RAB35-204ENST00000540803 CCDC144AA2RUR9 1427 aa28.47■■■□□ 2.15
RAB35-204ENST00000540803 PTPRUQ92729 1446 aa28.46■■■□□ 2.15
RAB35-204ENST00000540803 HSPA1LP34931 641 aa28.45■■■□□ 2.14
RAB35-204ENST00000540803 XRN1Q8IZH2 1706 aaKnown RBP28.43■■■□□ 2.14
RAB35-204ENST00000540803 RPGRIP1LQ68CZ1 1315 aa28.43■■■□□ 2.14
RAB35-204ENST00000540803 SPATA31E1Q6ZUB1 1445 aa28.41■■■□□ 2.14
RAB35-204ENST00000540803 SETD1AO15047 1707 aaKnown RBP28.4■■■□□ 2.14
RAB35-204ENST00000540803 METP08581 1390 aa28.4■■■□□ 2.14
RAB35-204ENST00000540803 AMOTL2Q9Y2J4 779 aa28.4■■■□□ 2.14
RAB35-204ENST00000540803 VGFO15240 615 aaPredicted RBP28.39■■■□□ 2.14
RAB35-204ENST00000540803 IFT172Q9UG01 1749 aa28.39■■■□□ 2.14
RAB35-204ENST00000540803 MSH6P52701 1360 aa28.38■■■□□ 2.13
RAB35-204ENST00000540803 NCOA3Q9Y6Q9 1424 aa28.38■■■□□ 2.13
RAB35-204ENST00000540803 HRCP23327 699 aa28.34■■■□□ 2.13
RAB35-204ENST00000540803 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.33■■■□□ 2.13
RAB35-204ENST00000540803 RGL3Q3MIN7 710 aa28.33■■■□□ 2.13
RAB35-204ENST00000540803 FAM135BQ49AJ0 1406 aa28.33■■■□□ 2.13
RAB35-204ENST00000540803 ROBO1Q9Y6N7 1651 aa28.32■■■□□ 2.12
RAB35-204ENST00000540803 C14orf37Q86TY3 774 aa28.28■■■□□ 2.12
RAB35-204ENST00000540803 ADGRF5Q8IZF2 1346 aa28.27■■■□□ 2.12
RAB35-204ENST00000540803 ANKRD30BQ9BXX2 1392 aa28.26■■■□□ 2.12
RAB35-204ENST00000540803 DISP3Q9P2K9 1392 aa28.26■■■□□ 2.12
RAB35-204ENST00000540803 C19orf44Q9H6X5 657 aa28.26■■■□□ 2.11
RAB35-204ENST00000540803 SLAIN2Q9P270 581 aa28.25■■■□□ 2.11
RAB35-204ENST00000540803 NALCNQ8IZF0 1738 aa28.21■■■□□ 2.11
RAB35-204ENST00000540803 PTCH1Q13635 1447 aa28.21■■■□□ 2.11
RAB35-204ENST00000540803 PRAG1Q86YV5 1406 aa28.21■■■□□ 2.11
RAB35-204ENST00000540803 CADPS2Q86UW7 1296 aa28.21■■■□□ 2.11
RAB35-204ENST00000540803 PIK3C2GO75747 1445 aa28.2■■■□□ 2.11
RAB35-204ENST00000540803 MED1Q15648 1581 aaPredicted RBP28.2■■■□□ 2.1
RAB35-204ENST00000540803 DCCP43146 1447 aa28.19■■■□□ 2.1
RAB35-204ENST00000540803 ATF3P18847 181 aa28.19■■■□□ 2.1
RAB35-204ENST00000540803 ROBO2Q9HCK4 1378 aa28.18■■■□□ 2.1
RAB35-204ENST00000540803 ADGRL3Q9HAR2 1447 aa28.18■■■□□ 2.1
RAB35-204ENST00000540803 MYOM2P54296 1465 aa28.16■■■□□ 2.1
RAB35-204ENST00000540803 ASXL1Q8IXJ9 1541 aa28.16■■■□□ 2.1
RAB35-204ENST00000540803 NRXN1Q9ULB1 1477 aa28.15■■■□□ 2.1
RAB35-204ENST00000540803 PHLPP1O60346 1717 aa28.15■■■□□ 2.1
RAB35-204ENST00000540803 KNDC1Q76NI1 1749 aa28.11■■■□□ 2.09
RAB35-204ENST00000540803 MST1RQ04912 1400 aa28.1■■■□□ 2.09
RAB35-204ENST00000540803 LAMC1P11047 1609 aa28.09■■■□□ 2.09
RAB35-204ENST00000540803 COL16A1Q07092 1604 aaPredicted RBP28.08■■■□□ 2.09
RAB35-204ENST00000540803 TECPR2O15040 1411 aa28.08■■■□□ 2.09
RAB35-204ENST00000540803 AHDC1Q5TGY3 1603 aaPredicted RBP28.07■■■□□ 2.08
RAB35-204ENST00000540803 TMEM132EQ6IEE7 984 aa28.07■■■□□ 2.08
RAB35-204ENST00000540803 LRPPRCP42704 1394 aaKnown RBP28.07■■■□□ 2.08
RAB35-204ENST00000540803 C14orf93Q9H972 538 aaKnown RBP28.06■■■□□ 2.08
RAB35-204ENST00000540803 BRINP3Q76B58 766 aa28.05■■■□□ 2.08
RAB35-204ENST00000540803 ABCC11Q96J66 1382 aa28.04■■■□□ 2.08
RAB35-204ENST00000540803 ILDR2Q71H61 639 aa28.04■■■□□ 2.08
RAB35-204ENST00000540803 STK26Q9P289 416 aa28.04■■■□□ 2.08
RAB35-204ENST00000540803 YTHDC2Q9H6S0 1430 aaKnown RBP28.03■■■□□ 2.08
RAB35-204ENST00000540803 CFAP70Q5T0N1 1121 aa28.03■■■□□ 2.08
RAB35-204ENST00000540803 NHSL1Q5SYE7 1610 aa28■■■□□ 2.07
RAB35-204ENST00000540803 DHX57Q6P158 1386 aaKnown RBP27.99■■■□□ 2.07
RAB35-204ENST00000540803 C1orf167Q5SNV9 1468 aa27.98■■■□□ 2.07
RAB35-204ENST00000540803 WAPLQ7Z5K2 1190 aa27.98■■■□□ 2.07
RAB35-204ENST00000540803 DCAF11Q8TEB1 546 aa27.98■■■□□ 2.07
RAB35-204ENST00000540803 CDC42BPGQ6DT37 1551 aa27.98■■■□□ 2.07
RAB35-204ENST00000540803 PLEKHH1Q9ULM0 1364 aa27.98■■■□□ 2.07
RAB35-204ENST00000540803 KDM2AQ9Y2K7 1162 aa27.97■■■□□ 2.07
RAB35-204ENST00000540803 JCADQ9P266 1359 aa27.97■■■□□ 2.07
RAB35-204ENST00000540803 ADGRB1O14514 1584 aa27.95■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms