RNA–Protein interactions for RNA: ENST00000540378.1

LRTM2-204, Transcript of leucine rich repeats and transmembrane domains 2, humanhuman

TSL 4

Gene LRTM2, Length 537 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM2-204ENST00000540378 E9PCH4 1651 aa23.4■■□□□ 1.34
LRTM2-204ENST00000540378 IQGAP3Q86VI3 1631 aa23.4■■□□□ 1.34
LRTM2-204ENST00000540378 TMEM94Q12767 1356 aa23.39■■□□□ 1.33
LRTM2-204ENST00000540378 PPP1R15AO75807 674 aaPredicted RBP23.38■■□□□ 1.33
LRTM2-204ENST00000540378 CHGAP10645 457 aaKnown RBP23.38■■□□□ 1.33
LRTM2-204ENST00000540378 KCNA6P17658 529 aa23.38■■□□□ 1.33
LRTM2-204ENST00000540378 ZFYVE9O95405 1425 aa23.38■■□□□ 1.33
LRTM2-204ENST00000540378 RIMS2Q9UQ26 1411 aa23.38■■□□□ 1.33
LRTM2-204ENST00000540378 TMEM131LA2VDJ0 1609 aa23.37■■□□□ 1.33
LRTM2-204ENST00000540378 NUP155O75694 1391 aa23.37■■□□□ 1.33
LRTM2-204ENST00000540378 NWD1Q149M9 1564 aa23.35■■□□□ 1.33
LRTM2-204ENST00000540378 PROSER2Q86WR7 435 aaPredicted RBP23.34■■□□□ 1.33
LRTM2-204ENST00000540378 PLEKHG1Q9ULL1 1385 aa23.34■■□□□ 1.33
LRTM2-204ENST00000540378 NKTRP30414 1462 aaKnown RBP23.34■■□□□ 1.33
LRTM2-204ENST00000540378 HDGFP51858 240 aaKnown RBP23.33■■□□□ 1.33
LRTM2-204ENST00000540378 RBM33Q96EV2 1170 aaKnown RBP23.33■■□□□ 1.33
LRTM2-204ENST00000540378 PHF23Q9BUL5 403 aaPredicted RBP23.31■■□□□ 1.32
LRTM2-204ENST00000540378 NUTM2DQ5VT03 806 aaPredicted RBP23.29■■□□□ 1.32
LRTM2-204ENST00000540378 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.29■■□□□ 1.32
LRTM2-204ENST00000540378 MSH6P52701 1360 aa23.26■■□□□ 1.31
LRTM2-204ENST00000540378 FAM135BQ49AJ0 1406 aa23.25■■□□□ 1.31
LRTM2-204ENST00000540378 RRBP1Q9P2E9 1410 aaKnown RBP23.25■■□□□ 1.31
LRTM2-204ENST00000540378 CHD2O14647 1828 aaKnown RBP23.24■■□□□ 1.31
LRTM2-204ENST00000540378 ROBO1Q9Y6N7 1651 aa23.23■■□□□ 1.31
LRTM2-204ENST00000540378 SPHKAPQ2M3C7 1700 aa23.22■■□□□ 1.31
LRTM2-204ENST00000540378 TBX22Q9Y458 520 aa23.22■■□□□ 1.31
LRTM2-204ENST00000540378 ADAMTS13Q76LX8 1427 aa23.22■■□□□ 1.31
LRTM2-204ENST00000540378 DIP2AQ14689 1571 aa23.22■■□□□ 1.31
LRTM2-204ENST00000540378 C14orf37Q86TY3 774 aa23.17■■□□□ 1.3
LRTM2-204ENST00000540378 NAIPQ13075 1403 aa23.16■■□□□ 1.3
LRTM2-204ENST00000540378 TRPM2O94759 1503 aa23.16■■□□□ 1.3
LRTM2-204ENST00000540378 PIK3R4Q99570 1358 aa23.15■■□□□ 1.3
LRTM2-204ENST00000540378 ZNF326Q5BKZ1 582 aaKnown RBP23.15■■□□□ 1.3
LRTM2-204ENST00000540378 SLAIN2Q9P270 581 aa23.14■■□□□ 1.29
LRTM2-204ENST00000540378 CLTCL1P53675 1640 aa23.11■■□□□ 1.29
LRTM2-204ENST00000540378 NCOA3Q9Y6Q9 1424 aa23.11■■□□□ 1.29
LRTM2-204ENST00000540378 PHLPP1O60346 1717 aa23.1■■□□□ 1.29
LRTM2-204ENST00000540378 PTPRUQ92729 1446 aa23.09■■□□□ 1.29
LRTM2-204ENST00000540378 NRXN3Q9Y4C0 1643 aa23.09■■□□□ 1.29
LRTM2-204ENST00000540378 AMOTL2Q9Y2J4 779 aa23.09■■□□□ 1.29
LRTM2-204ENST00000540378 SETBP1Q9Y6X0 1596 aa23.09■■□□□ 1.29
LRTM2-204ENST00000540378 TRIM52Q96A61 297 aa23.08■■□□□ 1.29
LRTM2-204ENST00000540378 HFM1A2PYH4 1435 aa23.08■■□□□ 1.28
LRTM2-204ENST00000540378 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.07■■□□□ 1.28
LRTM2-204ENST00000540378 ATF3P18847 181 aa23.06■■□□□ 1.28
LRTM2-204ENST00000540378 NEXMIFQ5QGS0 1516 aa23.05■■□□□ 1.28
LRTM2-204ENST00000540378 CADPS2Q86UW7 1296 aa23.05■■□□□ 1.28
LRTM2-204ENST00000540378 C19orf44Q9H6X5 657 aa23.05■■□□□ 1.28
LRTM2-204ENST00000540378 RGS17Q9UGC6 210 aaPredicted RBP23.04■■□□□ 1.28
LRTM2-204ENST00000540378 XRN1Q8IZH2 1706 aaKnown RBP23.04■■□□□ 1.28
LRTM2-204ENST00000540378 KIF1BO60333 1816 aa23.03■■□□□ 1.28
LRTM2-204ENST00000540378 JCADQ9P266 1359 aa23.02■■□□□ 1.28
LRTM2-204ENST00000540378 COL16A1Q07092 1604 aaPredicted RBP23.01■■□□□ 1.27
LRTM2-204ENST00000540378 METP08581 1390 aa23.01■■□□□ 1.27
LRTM2-204ENST00000540378 SLC4A1APQ9BWU0 796 aaKnown RBP23■■□□□ 1.27
LRTM2-204ENST00000540378 AHDC1Q5TGY3 1603 aaPredicted RBP22.97■■□□□ 1.27
LRTM2-204ENST00000540378 DCCP43146 1447 aa22.97■■□□□ 1.27
LRTM2-204ENST00000540378 POTEAQ6S8J7 498 aa22.93■■□□□ 1.26
LRTM2-204ENST00000540378 BRINP3Q76B58 766 aa22.93■■□□□ 1.26
LRTM2-204ENST00000540378 MST1RQ04912 1400 aa22.91■■□□□ 1.26
LRTM2-204ENST00000540378 ADGRL3Q9HAR2 1447 aa22.91■■□□□ 1.26
LRTM2-204ENST00000540378 VGFO15240 615 aaPredicted RBP22.91■■□□□ 1.26
LRTM2-204ENST00000540378 ASXL1Q8IXJ9 1541 aa22.91■■□□□ 1.26
LRTM2-204ENST00000540378 FOXD1Q16676 465 aa22.9■■□□□ 1.26
LRTM2-204ENST00000540378 NALCNQ8IZF0 1738 aa22.9■■□□□ 1.26
LRTM2-204ENST00000540378 LRP6O75581 1613 aa22.9■■□□□ 1.26
LRTM2-204ENST00000540378 SPATA31A6Q5VVP1 1343 aa22.89■■□□□ 1.26
LRTM2-204ENST00000540378 RPGRIP1LQ68CZ1 1315 aa22.88■■□□□ 1.25
LRTM2-204ENST00000540378 SHPRHQ149N8 1683 aa22.88■■□□□ 1.25
LRTM2-204ENST00000540378 MEX3CQ5U5Q3 659 aaKnown RBP22.88■■□□□ 1.25
LRTM2-204ENST00000540378 SETD1AO15047 1707 aaKnown RBP22.88■■□□□ 1.25
LRTM2-204ENST00000540378 PPLO60437 1756 aa22.87■■□□□ 1.25
LRTM2-204ENST00000540378 PTCH1Q13635 1447 aa22.86■■□□□ 1.25
LRTM2-204ENST00000540378 CCDC144AA2RUR9 1427 aa22.85■■□□□ 1.25
LRTM2-204ENST00000540378 NHSL1Q5SYE7 1610 aa22.84■■□□□ 1.25
LRTM2-204ENST00000540378 ROBO2Q9HCK4 1378 aa22.84■■□□□ 1.25
LRTM2-204ENST00000540378 NUTM2BA6NNL0 878 aaPredicted RBP22.81■■□□□ 1.24
LRTM2-204ENST00000540378 NUTM2EB1AL46 878 aaPredicted RBP22.81■■□□□ 1.24
LRTM2-204ENST00000540378 NUTM2AQ8IVF1 878 aaPredicted RBP22.81■■□□□ 1.24
LRTM2-204ENST00000540378 MPHOSPH9Q99550 1183 aa22.8■■□□□ 1.24
LRTM2-204ENST00000540378 SETD5Q9C0A6 1442 aa22.8■■□□□ 1.24
LRTM2-204ENST00000540378 RGL3Q3MIN7 710 aa22.79■■□□□ 1.24
LRTM2-204ENST00000540378 DDX17Q92841 729 aaKnown RBP22.79■■□□□ 1.24
LRTM2-204ENST00000540378 PRAG1Q86YV5 1406 aa22.78■■□□□ 1.24
LRTM2-204ENST00000540378 C1orf167Q5SNV9 1468 aa22.78■■□□□ 1.24
LRTM2-204ENST00000540378 ADGRF5Q8IZF2 1346 aa22.77■■□□□ 1.24
LRTM2-204ENST00000540378 SPATA31E1Q6ZUB1 1445 aa22.76■■□□□ 1.23
LRTM2-204ENST00000540378 ZNF772Q68DY9 489 aaPredicted RBP22.76■■□□□ 1.23
LRTM2-204ENST00000540378 LRRC59Q96AG4 307 aaKnown RBP22.75■■□□□ 1.23
LRTM2-204ENST00000540378 IFT172Q9UG01 1749 aa22.73■■□□□ 1.23
LRTM2-204ENST00000540378 ANKRD30BQ9BXX2 1392 aa22.73■■□□□ 1.23
LRTM2-204ENST00000540378 PNPLA6Q8IY17 1366 aa22.72■■□□□ 1.23
LRTM2-204ENST00000540378 ORAI2Q96SN7 254 aa22.71■■□□□ 1.23
LRTM2-204ENST00000540378 STK26Q9P289 416 aa22.7■■□□□ 1.22
LRTM2-204ENST00000540378 CDC42BPGQ6DT37 1551 aa22.68■■□□□ 1.22
LRTM2-204ENST00000540378 AFF2P51816 1311 aa22.68■■□□□ 1.22
LRTM2-204ENST00000540378 LAMC1P11047 1609 aa22.68■■□□□ 1.22
LRTM2-204ENST00000540378 PIK3C2GO75747 1445 aa22.67■■□□□ 1.22
LRTM2-204ENST00000540378 LRPPRCP42704 1394 aaKnown RBP22.66■■□□□ 1.22
LRTM2-204ENST00000540378 ACIN1Q9UKV3 1341 aaKnown RBP22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms