RNA–Protein interactions for RNA: ENST00000540090.5

LPCAT3-210, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 974 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-210ENST00000540090 ANKRD50Q9ULJ7 1429 aa31.02■■■□□ 2.56
LPCAT3-210ENST00000540090 FAM50AQ14320 339 aaKnown RBP31.02■■■□□ 2.56
LPCAT3-210ENST00000540090 HDGFP51858 240 aaKnown RBP31■■■□□ 2.55
LPCAT3-210ENST00000540090 POTEAQ6S8J7 498 aa30.99■■■□□ 2.55
LPCAT3-210ENST00000540090 SLAIN2Q9P270 581 aa30.99■■■□□ 2.55
LPCAT3-210ENST00000540090 MSH6P52701 1360 aa30.99■■■□□ 2.55
LPCAT3-210ENST00000540090 NWD1Q149M9 1564 aa30.99■■■□□ 2.55
LPCAT3-210ENST00000540090 ZFYVE9O95405 1425 aa30.98■■■□□ 2.55
LPCAT3-210ENST00000540090 PLEKHG1Q9ULL1 1385 aa30.98■■■□□ 2.55
LPCAT3-210ENST00000540090 ROBO1Q9Y6N7 1651 aa30.97■■■□□ 2.55
LPCAT3-210ENST00000540090 TBX22Q9Y458 520 aa30.94■■■□□ 2.54
LPCAT3-210ENST00000540090 RIMS2Q9UQ26 1411 aa30.93■■■□□ 2.54
LPCAT3-210ENST00000540090 PPP1R15AO75807 674 aaPredicted RBP30.93■■■□□ 2.54
LPCAT3-210ENST00000540090 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.89■■■□□ 2.54
LPCAT3-210ENST00000540090 NCOA3Q9Y6Q9 1424 aa30.87■■■□□ 2.53
LPCAT3-210ENST00000540090 JCADQ9P266 1359 aa30.86■■■□□ 2.53
LPCAT3-210ENST00000540090 TMEM131LA2VDJ0 1609 aa30.86■■■□□ 2.53
LPCAT3-210ENST00000540090 CHGAP10645 457 aaKnown RBP30.85■■■□□ 2.53
LPCAT3-210ENST00000540090 CHD2O14647 1828 aaKnown RBP30.84■■■□□ 2.53
LPCAT3-210ENST00000540090 ADAMTS13Q76LX8 1427 aa30.81■■■□□ 2.52
LPCAT3-210ENST00000540090 MYO5BQ9ULV0 1848 aa30.8■■■□□ 2.52
LPCAT3-210ENST00000540090 NUTM2DQ5VT03 806 aaPredicted RBP30.8■■■□□ 2.52
LPCAT3-210ENST00000540090 GCC2Q8IWJ2 1684 aa30.79■■■□□ 2.52
LPCAT3-210ENST00000540090 C14orf37Q86TY3 774 aa30.78■■■□□ 2.52
LPCAT3-210ENST00000540090 C19orf44Q9H6X5 657 aa30.78■■■□□ 2.52
LPCAT3-210ENST00000540090 PIK3R4Q99570 1358 aa30.78■■■□□ 2.52
LPCAT3-210ENST00000540090 UNC13BO14795 1591 aa30.77■■■□□ 2.52
LPCAT3-210ENST00000540090 PHLPP1O60346 1717 aa30.77■■■□□ 2.52
LPCAT3-210ENST00000540090 CADPS2Q86UW7 1296 aa30.77■■■□□ 2.52
LPCAT3-210ENST00000540090 ROCK1Q13464 1354 aa30.77■■■□□ 2.52
LPCAT3-210ENST00000540090 ATF3P18847 181 aa30.73■■■□□ 2.51
LPCAT3-210ENST00000540090 SPATA31A6Q5VVP1 1343 aa30.72■■■□□ 2.51
LPCAT3-210ENST00000540090 E9PCH4 1651 aa30.71■■■□□ 2.51
LPCAT3-210ENST00000540090 NUP155O75694 1391 aa30.7■■■□□ 2.51
LPCAT3-210ENST00000540090 COL16A1Q07092 1604 aaPredicted RBP30.7■■■□□ 2.51
LPCAT3-210ENST00000540090 AMOTL2Q9Y2J4 779 aa30.7■■■□□ 2.51
LPCAT3-210ENST00000540090 DIP2AQ14689 1571 aa30.7■■■□□ 2.5
LPCAT3-210ENST00000540090 IQGAP3Q86VI3 1631 aa30.65■■■□□ 2.5
LPCAT3-210ENST00000540090 PTPRUQ92729 1446 aa30.64■■■□□ 2.5
LPCAT3-210ENST00000540090 LRP6O75581 1613 aa30.64■■■□□ 2.5
LPCAT3-210ENST00000540090 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.64■■■□□ 2.5
LPCAT3-210ENST00000540090 ZNF772Q68DY9 489 aaPredicted RBP30.63■■■□□ 2.49
LPCAT3-210ENST00000540090 AHDC1Q5TGY3 1603 aaPredicted RBP30.62■■■□□ 2.49
LPCAT3-210ENST00000540090 MEX3CQ5U5Q3 659 aaKnown RBP30.62■■■□□ 2.49
LPCAT3-210ENST00000540090 BRINP3Q76B58 766 aa30.62■■■□□ 2.49
LPCAT3-210ENST00000540090 TRPM2O94759 1503 aa30.61■■■□□ 2.49
LPCAT3-210ENST00000540090 ITGAEP38570 1179 aa30.59■■■□□ 2.49
LPCAT3-210ENST00000540090 DCCP43146 1447 aa30.56■■■□□ 2.48
LPCAT3-210ENST00000540090 SETD1AO15047 1707 aaKnown RBP30.53■■■□□ 2.48
LPCAT3-210ENST00000540090 SHPRHQ149N8 1683 aa30.52■■■□□ 2.48
LPCAT3-210ENST00000540090 ZNF326Q5BKZ1 582 aaKnown RBP30.51■■■□□ 2.47
LPCAT3-210ENST00000540090 SETBP1Q9Y6X0 1596 aa30.5■■■□□ 2.47
LPCAT3-210ENST00000540090 UPF1Q92900 1129 aaKnown RBP eCLIP30.5■■■□□ 2.47
LPCAT3-210ENST00000540090 TRIM52Q96A61 297 aa30.5■■■□□ 2.47
LPCAT3-210ENST00000540090 METP08581 1390 aa30.5■■■□□ 2.47
LPCAT3-210ENST00000540090 NUTM2BA6NNL0 878 aaPredicted RBP30.49■■■□□ 2.47
LPCAT3-210ENST00000540090 NUTM2EB1AL46 878 aaPredicted RBP30.49■■■□□ 2.47
LPCAT3-210ENST00000540090 NUTM2AQ8IVF1 878 aaPredicted RBP30.49■■■□□ 2.47
LPCAT3-210ENST00000540090 NRXN3Q9Y4C0 1643 aa30.48■■■□□ 2.47
LPCAT3-210ENST00000540090 RXRBP28702 533 aa30.48■■■□□ 2.47
LPCAT3-210ENST00000540090 MST1RQ04912 1400 aa30.47■■■□□ 2.47
LPCAT3-210ENST00000540090 SETD5Q9C0A6 1442 aa30.47■■■□□ 2.47
LPCAT3-210ENST00000540090 XRN1Q8IZH2 1706 aaKnown RBP30.46■■■□□ 2.47
LPCAT3-210ENST00000540090 LRRC59Q96AG4 307 aaKnown RBP30.45■■■□□ 2.47
LPCAT3-210ENST00000540090 ASXL1Q8IXJ9 1541 aa30.45■■■□□ 2.47
LPCAT3-210ENST00000540090 PPARGC1BQ86YN6 1023 aaKnown RBP30.42■■■□□ 2.46
LPCAT3-210ENST00000540090 SPHKAPQ2M3C7 1700 aa30.4■■■□□ 2.46
LPCAT3-210ENST00000540090 AFF2P51816 1311 aa30.4■■■□□ 2.46
LPCAT3-210ENST00000540090 ADGRL3Q9HAR2 1447 aa30.39■■■□□ 2.45
LPCAT3-210ENST00000540090 DDX17Q92841 729 aaKnown RBP30.37■■■□□ 2.45
LPCAT3-210ENST00000540090 CDK12Q9NYV4 1490 aaPredicted RBP30.37■■■□□ 2.45
LPCAT3-210ENST00000540090 NHSL1Q5SYE7 1610 aa30.34■■■□□ 2.45
LPCAT3-210ENST00000540090 NEXMIFQ5QGS0 1516 aa30.34■■■□□ 2.45
LPCAT3-210ENST00000540090 PNPLA6Q8IY17 1366 aa30.32■■■□□ 2.44
LPCAT3-210ENST00000540090 C8orf37Q96NL8 207 aa30.31■■■□□ 2.44
LPCAT3-210ENST00000540090 CLTCL1P53675 1640 aa30.31■■■□□ 2.44
LPCAT3-210ENST00000540090 VGFO15240 615 aaPredicted RBP30.3■■■□□ 2.44
LPCAT3-210ENST00000540090 QTRT2Q9H974 415 aaKnown RBP30.3■■■□□ 2.44
LPCAT3-210ENST00000540090 C1orf167Q5SNV9 1468 aa30.28■■■□□ 2.44
LPCAT3-210ENST00000540090 RBM6P78332 1123 aaKnown RBP30.28■■■□□ 2.44
LPCAT3-210ENST00000540090 NAIPQ13075 1403 aa30.26■■■□□ 2.43
LPCAT3-210ENST00000540090 PTCH1Q13635 1447 aa30.24■■■□□ 2.43
LPCAT3-210ENST00000540090 ROBO2Q9HCK4 1378 aa30.24■■■□□ 2.43
LPCAT3-210ENST00000540090 SOS2Q07890 1332 aaPredicted RBP30.23■■■□□ 2.43
LPCAT3-210ENST00000540090 NALCNQ8IZF0 1738 aa30.23■■■□□ 2.43
LPCAT3-210ENST00000540090 ORAI2Q96SN7 254 aa30.23■■■□□ 2.43
LPCAT3-210ENST00000540090 RPGRIP1LQ68CZ1 1315 aa30.22■■■□□ 2.43
LPCAT3-210ENST00000540090 NGLY1Q96IV0 654 aa30.22■■■□□ 2.43
LPCAT3-210ENST00000540090 RRBP1Q9P2E9 1410 aaKnown RBP30.22■■■□□ 2.43
LPCAT3-210ENST00000540090 ADAMTS2O95450 1211 aa30.21■■■□□ 2.43
LPCAT3-210ENST00000540090 RGS12O14924 1447 aa30.2■■■□□ 2.42
LPCAT3-210ENST00000540090 PRAG1Q86YV5 1406 aa30.18■■■□□ 2.42
LPCAT3-210ENST00000540090 KIF1BO60333 1816 aa30.17■■■□□ 2.42
LPCAT3-210ENST00000540090 LAMC1P11047 1609 aa30.15■■■□□ 2.42
LPCAT3-210ENST00000540090 SLC4A1APQ9BWU0 796 aaKnown RBP30.14■■■□□ 2.42
LPCAT3-210ENST00000540090 HFM1A2PYH4 1435 aa30.13■■■□□ 2.41
LPCAT3-210ENST00000540090 FNBP4Q8N3X1 1017 aaPredicted RBP30.12■■■□□ 2.41
LPCAT3-210ENST00000540090 USP21Q9UK80 565 aa30.12■■■□□ 2.41
LPCAT3-210ENST00000540090 TRPC5Q9UL62 973 aaPredicted RBP30.09■■■□□ 2.41
LPCAT3-210ENST00000540090 ESCO1Q5FWF5 840 aa30.05■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms