RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 SYNJ2O15056 1496 aa18.1■□□□□ 0.49
SCNN1A-215ENST00000540037 CDC42BPBQ9Y5S2 1711 aa18.08■□□□□ 0.49
SCNN1A-215ENST00000540037 SYCP2Q9BX26 1530 aa18.08■□□□□ 0.49
SCNN1A-215ENST00000540037 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.08■□□□□ 0.48
SCNN1A-215ENST00000540037 USP19O94966 1318 aa18.06■□□□□ 0.48
SCNN1A-215ENST00000540037 LAMC1P11047 1609 aa18.05■□□□□ 0.48
SCNN1A-215ENST00000540037 NUP160Q12769 1436 aa18.04■□□□□ 0.48
SCNN1A-215ENST00000540037 EIF5BO60841 1220 aaKnown RBP18.04■□□□□ 0.48
SCNN1A-215ENST00000540037 TRMT2AQ8IZ69 625 aaKnown RBP18.04■□□□□ 0.48
SCNN1A-215ENST00000540037 PANK1Q8TE04 598 aa18.03■□□□□ 0.48
SCNN1A-215ENST00000540037 POGKQ9P215 609 aa18.03■□□□□ 0.48
SCNN1A-215ENST00000540037 SLKQ9H2G2 1235 aaPredicted RBP18.03■□□□□ 0.48
SCNN1A-215ENST00000540037 UNC13BO14795 1591 aa18.02■□□□□ 0.48
SCNN1A-215ENST00000540037 COG6Q9Y2V7 657 aa18.02■□□□□ 0.48
SCNN1A-215ENST00000540037 EIF2AK4Q9P2K8 1649 aaKnown RBP18.01■□□□□ 0.47
SCNN1A-215ENST00000540037 PREX2Q70Z35 1606 aa18■□□□□ 0.47
SCNN1A-215ENST00000540037 NKTRP30414 1462 aaKnown RBP18■□□□□ 0.47
SCNN1A-215ENST00000540037 ARHGAP5Q13017 1502 aa18■□□□□ 0.47
SCNN1A-215ENST00000540037 RSPH4AQ5TD94 716 aa17.99■□□□□ 0.47
SCNN1A-215ENST00000540037 EIF3AQ14152 1382 aaKnown RBP17.99■□□□□ 0.47
SCNN1A-215ENST00000540037 IQGAP3Q86VI3 1631 aa17.97■□□□□ 0.47
SCNN1A-215ENST00000540037 RNF17Q9BXT8 1623 aaKnown RBP17.97■□□□□ 0.47
SCNN1A-215ENST00000540037 NEUROD2Q15784 382 aa17.97■□□□□ 0.47
SCNN1A-215ENST00000540037 TNNQ9UQP3 1299 aa17.97■□□□□ 0.47
SCNN1A-215ENST00000540037 ASXL1Q8IXJ9 1541 aa17.97■□□□□ 0.47
SCNN1A-215ENST00000540037 TTC37Q6PGP7 1564 aa17.97■□□□□ 0.47
SCNN1A-215ENST00000540037 ARXQ96QS3 562 aa17.96■□□□□ 0.47
SCNN1A-215ENST00000540037 CANXP27824 592 aaKnown RBP17.96■□□□□ 0.46
SCNN1A-215ENST00000540037 PIK3C2GO75747 1445 aa17.95■□□□□ 0.46
SCNN1A-215ENST00000540037 E9PSI1 815 aa17.95■□□□□ 0.46
SCNN1A-215ENST00000540037 CLUAP1Q96AJ1 413 aa17.95■□□□□ 0.46
SCNN1A-215ENST00000540037 RRP7AQ9Y3A4 280 aaKnown RBP17.95■□□□□ 0.46
SCNN1A-215ENST00000540037 CLASP1Q7Z460 1538 aa17.94■□□□□ 0.46
SCNN1A-215ENST00000540037 CARD14Q9BXL6 1004 aa17.93■□□□□ 0.46
SCNN1A-215ENST00000540037 BCL2L13Q9BXK5 485 aa17.93■□□□□ 0.46
SCNN1A-215ENST00000540037 MADDQ8WXG6 1647 aa17.93■□□□□ 0.46
SCNN1A-215ENST00000540037 SPRYD3Q8NCJ5 442 aa17.93■□□□□ 0.46
SCNN1A-215ENST00000540037 IQGAP1P46940 1657 aa17.92■□□□□ 0.46
SCNN1A-215ENST00000540037 TNNT2P45379 298 aaPredicted RBP17.92■□□□□ 0.46
SCNN1A-215ENST00000540037 CENPJQ9HC77 1338 aaPredicted RBP17.92■□□□□ 0.46
SCNN1A-215ENST00000540037 ATP10AO60312 1499 aa17.92■□□□□ 0.46
SCNN1A-215ENST00000540037 ERCC6Q03468 1493 aa17.92■□□□□ 0.46
SCNN1A-215ENST00000540037 SYNMO15061 1565 aa17.92■□□□□ 0.46
SCNN1A-215ENST00000540037 MYOM1P52179 1685 aa17.91■□□□□ 0.46
SCNN1A-215ENST00000540037 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.91■□□□□ 0.46
SCNN1A-215ENST00000540037 WWC1Q8IX03 1113 aa17.91■□□□□ 0.46
SCNN1A-215ENST00000540037 RLBP1P12271 317 aa17.9■□□□□ 0.46
SCNN1A-215ENST00000540037 CDCA8Q53HL2 280 aa17.9■□□□□ 0.46
SCNN1A-215ENST00000540037 SCAF11Q99590 1463 aaKnown RBP17.9■□□□□ 0.46
SCNN1A-215ENST00000540037 PCDHB15Q9Y5E8 787 aa17.9■□□□□ 0.46
SCNN1A-215ENST00000540037 CGNL1Q0VF96 1302 aa17.9■□□□□ 0.46
SCNN1A-215ENST00000540037 NLRP1Q9C000 1473 aa17.9■□□□□ 0.46
SCNN1A-215ENST00000540037 MAST1Q9Y2H9 1570 aa17.89■□□□□ 0.45
SCNN1A-215ENST00000540037 ABCC2Q92887 1545 aa17.88■□□□□ 0.45
SCNN1A-215ENST00000540037 PDE3AQ14432 1141 aa17.88■□□□□ 0.45
SCNN1A-215ENST00000540037 VIRMAQ69YN4 1812 aaKnown RBP17.88■□□□□ 0.45
SCNN1A-215ENST00000540037 CFAP70Q5T0N1 1121 aa17.88■□□□□ 0.45
SCNN1A-215ENST00000540037 FAM43AQ8N2R8 423 aa17.88■□□□□ 0.45
SCNN1A-215ENST00000540037 ANTXR1Q9H6X2 564 aa17.87■□□□□ 0.45
SCNN1A-215ENST00000540037 DUOX2Q9NRD8 1548 aa17.87■□□□□ 0.45
SCNN1A-215ENST00000540037 PLXNC1O60486 1568 aa17.87■□□□□ 0.45
SCNN1A-215ENST00000540037 RRAGDQ9NQL2 400 aaPredicted RBP17.86■□□□□ 0.45
SCNN1A-215ENST00000540037 MAPK8IP3Q9UPT6 1336 aa17.86■□□□□ 0.45
SCNN1A-215ENST00000540037 BECN1Q14457 450 aa17.86■□□□□ 0.45
SCNN1A-215ENST00000540037 TBC1D2Q9BYX2 928 aa17.85■□□□□ 0.45
SCNN1A-215ENST00000540037 PDZRN3Q9UPQ7 1066 aa17.85■□□□□ 0.45
SCNN1A-215ENST00000540037 RARSP54136 660 aaKnown RBP17.84■□□□□ 0.45
SCNN1A-215ENST00000540037 NPC1L1Q9UHC9 1359 aa17.84■□□□□ 0.45
SCNN1A-215ENST00000540037 TRAPPC8Q9Y2L5 1435 aa17.83■□□□□ 0.44
SCNN1A-215ENST00000540037 GZF1Q9H116 711 aaPredicted RBP17.83■□□□□ 0.44
SCNN1A-215ENST00000540037 AFAP1Q8N556 730 aa17.82■□□□□ 0.44
SCNN1A-215ENST00000540037 TBC1D32Q96NH3 1257 aa17.82■□□□□ 0.44
SCNN1A-215ENST00000540037 ERVK-7P63135 1459 aa17.81■□□□□ 0.44
SCNN1A-215ENST00000540037 ADGRF5Q8IZF2 1346 aa17.81■□□□□ 0.44
SCNN1A-215ENST00000540037 CLTCL1P53675 1640 aa17.81■□□□□ 0.44
SCNN1A-215ENST00000540037 SPHKAPQ2M3C7 1700 aa17.8■□□□□ 0.44
SCNN1A-215ENST00000540037 SCAPERQ9BY12 1400 aa17.8■□□□□ 0.44
SCNN1A-215ENST00000540037 TCP11L2Q8N4U5 519 aa17.8■□□□□ 0.44
SCNN1A-215ENST00000540037 KDM5AP29375 1690 aaKnown RBP17.8■□□□□ 0.44
SCNN1A-215ENST00000540037 CEP152O94986 1710 aa17.79■□□□□ 0.44
SCNN1A-215ENST00000540037 PANK2Q9BZ23 570 aa17.79■□□□□ 0.44
SCNN1A-215ENST00000540037 UBE2Q2Q8WVN8 375 aa17.78■□□□□ 0.44
SCNN1A-215ENST00000540037 RSPH6AQ9H0K4 717 aa17.77■□□□□ 0.44
SCNN1A-215ENST00000540037 UPF2Q9HAU5 1272 aaKnown RBP17.77■□□□□ 0.44
SCNN1A-215ENST00000540037 PMFBP1Q8TBY8 1022 aa17.77■□□□□ 0.44
SCNN1A-215ENST00000540037 TRPM2O94759 1503 aa17.77■□□□□ 0.43
SCNN1A-215ENST00000540037 UGGT1Q9NYU2 1555 aa17.77■□□□□ 0.43
SCNN1A-215ENST00000540037 XRCC6P12956 609 aaKnown RBP eCLIP17.77■□□□□ 0.43
SCNN1A-215ENST00000540037 SLC12A5Q9H2X9 1139 aa17.76■□□□□ 0.43
SCNN1A-215ENST00000540037 MORC1Q86VD1 984 aa17.76■□□□□ 0.43
SCNN1A-215ENST00000540037 EFCAB2Q5VUJ9 269 aa17.75■□□□□ 0.43
SCNN1A-215ENST00000540037 SPAG9O60271 1321 aaKnown RBP17.75■□□□□ 0.43
SCNN1A-215ENST00000540037 RUNDC1Q96C34 613 aa17.74■□□□□ 0.43
SCNN1A-215ENST00000540037 POLR3AO14802 1390 aaPredicted RBP17.74■□□□□ 0.43
SCNN1A-215ENST00000540037 MFAP1P55081 439 aaKnown RBP17.74■□□□□ 0.43
SCNN1A-215ENST00000540037 NINLQ9Y2I6 1382 aa17.74■□□□□ 0.43
SCNN1A-215ENST00000540037 ERCC6L2Q5T890 1561 aa17.74■□□□□ 0.43
SCNN1A-215ENST00000540037 PTPRTO14522 1441 aa17.73■□□□□ 0.43
SCNN1A-215ENST00000540037 NSD3Q9BZ95 1437 aa17.73■□□□□ 0.43
SCNN1A-215ENST00000540037 PLCH2O75038 1416 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms