RNA–Protein interactions for RNA: ENST00000539782.1

LDHB-208, Transcript of lactate dehydrogenase B, humanhuman

TSL 3

Gene LDHB, Length 487 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-208ENST00000539782 NWD1Q149M9 1564 aa11.15□□□□□ -0.62
LDHB-208ENST00000539782 ADGRL2O95490 1459 aa11.14□□□□□ -0.63
LDHB-208ENST00000539782 RBM33Q96EV2 1170 aaKnown RBP11.14□□□□□ -0.63
LDHB-208ENST00000539782 TET3O43151 1660 aa11.14□□□□□ -0.63
LDHB-208ENST00000539782 RPRD2Q5VT52 1461 aaKnown RBP11.13□□□□□ -0.63
LDHB-208ENST00000539782 ANKRD50Q9ULJ7 1429 aa11.13□□□□□ -0.63
LDHB-208ENST00000539782 C14orf37Q86TY3 774 aa11.13□□□□□ -0.63
LDHB-208ENST00000539782 CHGAP10645 457 aaKnown RBP11.12□□□□□ -0.63
LDHB-208ENST00000539782 RGS17Q9UGC6 210 aaPredicted RBP11.12□□□□□ -0.63
LDHB-208ENST00000539782 PLEKHG1Q9ULL1 1385 aa11.12□□□□□ -0.63
LDHB-208ENST00000539782 RIMS2Q9UQ26 1411 aa11.11□□□□□ -0.63
LDHB-208ENST00000539782 GCC2Q8IWJ2 1684 aa11.11□□□□□ -0.63
LDHB-208ENST00000539782 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.1□□□□□ -0.63
LDHB-208ENST00000539782 SLAIN2Q9P270 581 aa11.1□□□□□ -0.63
LDHB-208ENST00000539782 JCADQ9P266 1359 aa11.1□□□□□ -0.63
LDHB-208ENST00000539782 ZFYVE9O95405 1425 aa11.09□□□□□ -0.63
LDHB-208ENST00000539782 PHLPP1O60346 1717 aa11.09□□□□□ -0.63
LDHB-208ENST00000539782 POTEAQ6S8J7 498 aa11.09□□□□□ -0.63
LDHB-208ENST00000539782 MEX3CQ5U5Q3 659 aaKnown RBP11.08□□□□□ -0.64
LDHB-208ENST00000539782 UNC13BO14795 1591 aa11.07□□□□□ -0.64
LDHB-208ENST00000539782 TMEM131LA2VDJ0 1609 aa11.06□□□□□ -0.64
LDHB-208ENST00000539782 ATF3P18847 181 aa11.06□□□□□ -0.64
LDHB-208ENST00000539782 NUTM2DQ5VT03 806 aaPredicted RBP11.06□□□□□ -0.64
LDHB-208ENST00000539782 TBX22Q9Y458 520 aa11.06□□□□□ -0.64
LDHB-208ENST00000539782 MYO5BQ9ULV0 1848 aa11.06□□□□□ -0.64
LDHB-208ENST00000539782 NCOA3Q9Y6Q9 1424 aa11.06□□□□□ -0.64
LDHB-208ENST00000539782 DIP2AQ14689 1571 aa11.06□□□□□ -0.64
LDHB-208ENST00000539782 CHD2O14647 1828 aaKnown RBP11.05□□□□□ -0.64
LDHB-208ENST00000539782 CADPS2Q86UW7 1296 aa11.05□□□□□ -0.64
LDHB-208ENST00000539782 SPATA31A6Q5VVP1 1343 aa11.04□□□□□ -0.64
LDHB-208ENST00000539782 TRPM2O94759 1503 aa11.04□□□□□ -0.64
LDHB-208ENST00000539782 PIK3R4Q99570 1358 aa11.03□□□□□ -0.64
LDHB-208ENST00000539782 COL16A1Q07092 1604 aaPredicted RBP11.03□□□□□ -0.64
LDHB-208ENST00000539782 E9PCH4 1651 aa11.03□□□□□ -0.64
LDHB-208ENST00000539782 IQGAP3Q86VI3 1631 aa11.02□□□□□ -0.64
LDHB-208ENST00000539782 ADAMTS13Q76LX8 1427 aa11.02□□□□□ -0.64
LDHB-208ENST00000539782 SETD1AO15047 1707 aaKnown RBP11.02□□□□□ -0.65
LDHB-208ENST00000539782 ITGAEP38570 1179 aa11.02□□□□□ -0.65
LDHB-208ENST00000539782 ZNF772Q68DY9 489 aaPredicted RBP11.02□□□□□ -0.65
LDHB-208ENST00000539782 C19orf44Q9H6X5 657 aa11.02□□□□□ -0.65
LDHB-208ENST00000539782 NUP155O75694 1391 aa11.02□□□□□ -0.65
LDHB-208ENST00000539782 ROCK1Q13464 1354 aa11.02□□□□□ -0.65
LDHB-208ENST00000539782 AHDC1Q5TGY3 1603 aaPredicted RBP11.01□□□□□ -0.65
LDHB-208ENST00000539782 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.01□□□□□ -0.65
LDHB-208ENST00000539782 LRP6O75581 1613 aa11□□□□□ -0.65
LDHB-208ENST00000539782 ZNF326Q5BKZ1 582 aaKnown RBP11□□□□□ -0.65
LDHB-208ENST00000539782 AMOTL2Q9Y2J4 779 aa11□□□□□ -0.65
LDHB-208ENST00000539782 NUTM2BA6NNL0 878 aaPredicted RBP10.99□□□□□ -0.65
LDHB-208ENST00000539782 NUTM2EB1AL46 878 aaPredicted RBP10.99□□□□□ -0.65
LDHB-208ENST00000539782 NUTM2AQ8IVF1 878 aaPredicted RBP10.99□□□□□ -0.65
LDHB-208ENST00000539782 TRIM52Q96A61 297 aa10.99□□□□□ -0.65
LDHB-208ENST00000539782 SHPRHQ149N8 1683 aa10.98□□□□□ -0.65
LDHB-208ENST00000539782 DCCP43146 1447 aa10.98□□□□□ -0.65
LDHB-208ENST00000539782 BRINP3Q76B58 766 aa10.97□□□□□ -0.65
LDHB-208ENST00000539782 ASXL1Q8IXJ9 1541 aa10.96□□□□□ -0.65
LDHB-208ENST00000539782 PTPRUQ92729 1446 aa10.96□□□□□ -0.65
LDHB-208ENST00000539782 SETBP1Q9Y6X0 1596 aa10.95□□□□□ -0.66
LDHB-208ENST00000539782 RXRBP28702 533 aa10.95□□□□□ -0.66
LDHB-208ENST00000539782 SPHKAPQ2M3C7 1700 aa10.95□□□□□ -0.66
LDHB-208ENST00000539782 XRN1Q8IZH2 1706 aaKnown RBP10.95□□□□□ -0.66
LDHB-208ENST00000539782 MST1RQ04912 1400 aa10.93□□□□□ -0.66
LDHB-208ENST00000539782 AFF2P51816 1311 aa10.93□□□□□ -0.66
LDHB-208ENST00000539782 UPF1Q92900 1129 aaKnown RBP eCLIP10.93□□□□□ -0.66
LDHB-208ENST00000539782 LRRC59Q96AG4 307 aaKnown RBP10.93□□□□□ -0.66
LDHB-208ENST00000539782 NRXN3Q9Y4C0 1643 aa10.93□□□□□ -0.66
LDHB-208ENST00000539782 ADGRL3Q9HAR2 1447 aa10.92□□□□□ -0.66
LDHB-208ENST00000539782 SETD5Q9C0A6 1442 aa10.92□□□□□ -0.66
LDHB-208ENST00000539782 METP08581 1390 aa10.91□□□□□ -0.66
LDHB-208ENST00000539782 NHSL1Q5SYE7 1610 aa10.91□□□□□ -0.66
LDHB-208ENST00000539782 PPARGC1BQ86YN6 1023 aaKnown RBP10.91□□□□□ -0.66
LDHB-208ENST00000539782 C8orf37Q96NL8 207 aa10.91□□□□□ -0.66
LDHB-208ENST00000539782 CDK12Q9NYV4 1490 aaPredicted RBP10.91□□□□□ -0.66
LDHB-208ENST00000539782 CLTCL1P53675 1640 aa10.89□□□□□ -0.67
LDHB-208ENST00000539782 PNPLA6Q8IY17 1366 aa10.89□□□□□ -0.67
LDHB-208ENST00000539782 NEXMIFQ5QGS0 1516 aa10.89□□□□□ -0.67
LDHB-208ENST00000539782 NALCNQ8IZF0 1738 aa10.88□□□□□ -0.67
LDHB-208ENST00000539782 DDX17Q92841 729 aaKnown RBP10.88□□□□□ -0.67
LDHB-208ENST00000539782 KIF1BO60333 1816 aa10.87□□□□□ -0.67
LDHB-208ENST00000539782 ADAMTS2O95450 1211 aa10.87□□□□□ -0.67
LDHB-208ENST00000539782 RBM6P78332 1123 aaKnown RBP10.87□□□□□ -0.67
LDHB-208ENST00000539782 NGLY1Q96IV0 654 aa10.87□□□□□ -0.67
LDHB-208ENST00000539782 QTRT2Q9H974 415 aaKnown RBP10.87□□□□□ -0.67
LDHB-208ENST00000539782 C1orf167Q5SNV9 1468 aa10.87□□□□□ -0.67
LDHB-208ENST00000539782 PTCH1Q13635 1447 aa10.86□□□□□ -0.67
LDHB-208ENST00000539782 VGFO15240 615 aaPredicted RBP10.86□□□□□ -0.67
LDHB-208ENST00000539782 RGS12O14924 1447 aa10.85□□□□□ -0.67
LDHB-208ENST00000539782 NAIPQ13075 1403 aa10.84□□□□□ -0.67
LDHB-208ENST00000539782 RPGRIP1LQ68CZ1 1315 aa10.84□□□□□ -0.67
LDHB-208ENST00000539782 ATAD2Q6PL18 1390 aa10.83□□□□□ -0.68
LDHB-208ENST00000539782 ROBO2Q9HCK4 1378 aa10.83□□□□□ -0.68
LDHB-208ENST00000539782 USP21Q9UK80 565 aa10.83□□□□□ -0.68
LDHB-208ENST00000539782 HFM1A2PYH4 1435 aa10.83□□□□□ -0.68
LDHB-208ENST00000539782 FOXD1Q16676 465 aa10.82□□□□□ -0.68
LDHB-208ENST00000539782 ORAI2Q96SN7 254 aa10.82□□□□□ -0.68
LDHB-208ENST00000539782 SLC4A1APQ9BWU0 796 aaKnown RBP10.82□□□□□ -0.68
LDHB-208ENST00000539782 TRPC5Q9UL62 973 aaPredicted RBP10.82□□□□□ -0.68
LDHB-208ENST00000539782 RRBP1Q9P2E9 1410 aaKnown RBP10.81□□□□□ -0.68
LDHB-208ENST00000539782 SOS2Q07890 1332 aaPredicted RBP10.81□□□□□ -0.68
LDHB-208ENST00000539782 LAMC1P11047 1609 aa10.8□□□□□ -0.68
LDHB-208ENST00000539782 ESCO1Q5FWF5 840 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms