RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 RIMS2Q9UQ26 1411 aa18.66■□□□□ 0.58
TSPAN9-207ENST00000539631 SCAF11Q99590 1463 aaKnown RBP18.66■□□□□ 0.58
TSPAN9-207ENST00000539631 TXNDC2Q86VQ3 553 aa18.66■□□□□ 0.58
TSPAN9-207ENST00000539631 ZFYVE9O95405 1425 aa18.66■□□□□ 0.58
TSPAN9-207ENST00000539631 IQGAP1P46940 1657 aa18.65■□□□□ 0.58
TSPAN9-207ENST00000539631 MED14O60244 1454 aa18.65■□□□□ 0.58
TSPAN9-207ENST00000539631 ZNF326Q5BKZ1 582 aaKnown RBP18.64■□□□□ 0.57
TSPAN9-207ENST00000539631 EID1Q9Y6B2 187 aa18.64■□□□□ 0.57
TSPAN9-207ENST00000539631 NPHP4O75161 1426 aaPredicted RBP18.64■□□□□ 0.57
TSPAN9-207ENST00000539631 DMRT2Q9Y5R5 561 aa18.63■□□□□ 0.57
TSPAN9-207ENST00000539631 NEXMIFQ5QGS0 1516 aa18.63■□□□□ 0.57
TSPAN9-207ENST00000539631 NUTM2DQ5VT03 806 aaPredicted RBP18.62■□□□□ 0.57
TSPAN9-207ENST00000539631 SPATA31E1Q6ZUB1 1445 aa18.62■□□□□ 0.57
TSPAN9-207ENST00000539631 PPLO60437 1756 aa18.62■□□□□ 0.57
TSPAN9-207ENST00000539631 IFT172Q9UG01 1749 aa18.61■□□□□ 0.57
TSPAN9-207ENST00000539631 HDGFP51858 240 aaKnown RBP18.59■□□□□ 0.57
TSPAN9-207ENST00000539631 RGL3Q3MIN7 710 aa18.59■□□□□ 0.57
TSPAN9-207ENST00000539631 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.59■□□□□ 0.57
TSPAN9-207ENST00000539631 PPP1R15AO75807 674 aaPredicted RBP18.58■□□□□ 0.56
TSPAN9-207ENST00000539631 SENP3Q9H4L4 574 aaPredicted RBP18.58■□□□□ 0.56
TSPAN9-207ENST00000539631 PLEKHG1Q9ULL1 1385 aa18.56■□□□□ 0.56
TSPAN9-207ENST00000539631 RPGRIP1LQ68CZ1 1315 aa18.55■□□□□ 0.56
TSPAN9-207ENST00000539631 BCANQ96GW7 911 aa18.54■□□□□ 0.56
TSPAN9-207ENST00000539631 NRXN3Q9Y4C0 1643 aa18.53■□□□□ 0.56
TSPAN9-207ENST00000539631 SIN3AQ96ST3 1273 aa18.53■□□□□ 0.56
TSPAN9-207ENST00000539631 VGFO15240 615 aaPredicted RBP18.51■□□□□ 0.55
TSPAN9-207ENST00000539631 SLC26A8Q96RN1 970 aa18.51■□□□□ 0.55
TSPAN9-207ENST00000539631 SETBP1Q9Y6X0 1596 aa18.51■□□□□ 0.55
TSPAN9-207ENST00000539631 STRCP1A6NGW2 1772 aa18.5■□□□□ 0.55
TSPAN9-207ENST00000539631 ZNF335Q9H4Z2 1342 aaPredicted RBP18.49■□□□□ 0.55
TSPAN9-207ENST00000539631 ADAMTS13Q76LX8 1427 aa18.49■□□□□ 0.55
TSPAN9-207ENST00000539631 NEUROD1Q13562 356 aa18.49■□□□□ 0.55
TSPAN9-207ENST00000539631 ADGRF5Q8IZF2 1346 aa18.49■□□□□ 0.55
TSPAN9-207ENST00000539631 DIP2AQ14689 1571 aa18.48■□□□□ 0.55
TSPAN9-207ENST00000539631 SETD1AO15047 1707 aaKnown RBP18.47■□□□□ 0.55
TSPAN9-207ENST00000539631 LTBP4Q8N2S1 1624 aa18.47■□□□□ 0.55
TSPAN9-207ENST00000539631 CHD2O14647 1828 aaKnown RBP18.46■□□□□ 0.55
TSPAN9-207ENST00000539631 MYOM2P54296 1465 aa18.46■□□□□ 0.55
TSPAN9-207ENST00000539631 CERKQ8TCT0 537 aa18.45■□□□□ 0.54
TSPAN9-207ENST00000539631 DCAF11Q8TEB1 546 aa18.45■□□□□ 0.54
TSPAN9-207ENST00000539631 TBX22Q9Y458 520 aa18.45■□□□□ 0.54
TSPAN9-207ENST00000539631 ALKQ9UM73 1620 aa18.45■□□□□ 0.54
TSPAN9-207ENST00000539631 KDM2AQ9Y2K7 1162 aa18.44■□□□□ 0.54
TSPAN9-207ENST00000539631 NRXN1Q9ULB1 1477 aa18.43■□□□□ 0.54
TSPAN9-207ENST00000539631 PIK3C2GO75747 1445 aa18.42■□□□□ 0.54
TSPAN9-207ENST00000539631 NWD1Q149M9 1564 aa18.42■□□□□ 0.54
TSPAN9-207ENST00000539631 CPS1P31327 1500 aa18.4■□□□□ 0.54
TSPAN9-207ENST00000539631 METP08581 1390 aa18.4■□□□□ 0.54
TSPAN9-207ENST00000539631 PTPRUQ92729 1446 aa18.4■□□□□ 0.54
TSPAN9-207ENST00000539631 LAMC1P11047 1609 aa18.39■□□□□ 0.53
TSPAN9-207ENST00000539631 KCNA6P17658 529 aa18.39■□□□□ 0.53
TSPAN9-207ENST00000539631 CCER1Q8TC90 406 aaPredicted RBP18.39■□□□□ 0.53
TSPAN9-207ENST00000539631 L3MBTL2Q969R5 705 aa18.39■□□□□ 0.53
TSPAN9-207ENST00000539631 PIK3R4Q99570 1358 aa18.39■□□□□ 0.53
TSPAN9-207ENST00000539631 XRN1Q8IZH2 1706 aaKnown RBP18.37■□□□□ 0.53
TSPAN9-207ENST00000539631 STAC3Q96MF2 364 aa18.37■□□□□ 0.53
TSPAN9-207ENST00000539631 XIRP1Q702N8 1843 aaKnown RBP18.37■□□□□ 0.53
TSPAN9-207ENST00000539631 ASXL1Q8IXJ9 1541 aa18.36■□□□□ 0.53
TSPAN9-207ENST00000539631 CLSPNQ9HAW4 1339 aa18.36■□□□□ 0.53
TSPAN9-207ENST00000539631 LRRC7Q96NW7 1537 aa18.35■□□□□ 0.53
TSPAN9-207ENST00000539631 CFAP70Q5T0N1 1121 aa18.35■□□□□ 0.53
TSPAN9-207ENST00000539631 C14orf93Q9H972 538 aaKnown RBP18.35■□□□□ 0.53
TSPAN9-207ENST00000539631 NKTRP30414 1462 aaKnown RBP18.34■□□□□ 0.53
TSPAN9-207ENST00000539631 TONSLQ96HA7 1378 aa18.34■□□□□ 0.53
TSPAN9-207ENST00000539631 AMOTL2Q9Y2J4 779 aa18.34■□□□□ 0.53
TSPAN9-207ENST00000539631 PRAG1Q86YV5 1406 aa18.32■□□□□ 0.52
TSPAN9-207ENST00000539631 KIAA1210Q9ULL0 1709 aa18.32■□□□□ 0.52
TSPAN9-207ENST00000539631 TMEM132EQ6IEE7 984 aa18.32■□□□□ 0.52
TSPAN9-207ENST00000539631 PROSER2Q86WR7 435 aaPredicted RBP18.31■□□□□ 0.52
TSPAN9-207ENST00000539631 KNDC1Q76NI1 1749 aa18.31■□□□□ 0.52
TSPAN9-207ENST00000539631 RBM33Q96EV2 1170 aaKnown RBP18.3■□□□□ 0.52
TSPAN9-207ENST00000539631 ADGRB1O14514 1584 aa18.3■□□□□ 0.52
TSPAN9-207ENST00000539631 IQSEC2Q5JU85 1478 aa18.29■□□□□ 0.52
TSPAN9-207ENST00000539631 TRPM1Q7Z4N2 1603 aa18.29■□□□□ 0.52
TSPAN9-207ENST00000539631 STK26Q9P289 416 aa18.28■□□□□ 0.52
TSPAN9-207ENST00000539631 LRPPRCP42704 1394 aaKnown RBP18.28■□□□□ 0.52
TSPAN9-207ENST00000539631 TMEM94Q12767 1356 aa18.28■□□□□ 0.52
TSPAN9-207ENST00000539631 YTHDC2Q9H6S0 1430 aaKnown RBP18.27■□□□□ 0.52
TSPAN9-207ENST00000539631 NBPF8Q3BBV2 869 aa18.25■□□□□ 0.51
TSPAN9-207ENST00000539631 ROBO2Q9HCK4 1378 aa18.25■□□□□ 0.51
TSPAN9-207ENST00000539631 PTCH1Q13635 1447 aa18.24■□□□□ 0.51
TSPAN9-207ENST00000539631 NBPF1Q3BBV0 1214 aa18.24■□□□□ 0.51
TSPAN9-207ENST00000539631 TECPR2O15040 1411 aa18.23■□□□□ 0.51
TSPAN9-207ENST00000539631 ABCC11Q96J66 1382 aa18.23■□□□□ 0.51
TSPAN9-207ENST00000539631 NALCNQ8IZF0 1738 aa18.23■□□□□ 0.51
TSPAN9-207ENST00000539631 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.22■□□□□ 0.51
TSPAN9-207ENST00000539631 NCOA3Q9Y6Q9 1424 aa18.22■□□□□ 0.51
TSPAN9-207ENST00000539631 TIMELESSQ9UNS1 1208 aa18.21■□□□□ 0.51
TSPAN9-207ENST00000539631 ARHGEF28Q8N1W1 1705 aaKnown RBP18.2■□□□□ 0.5
TSPAN9-207ENST00000539631 DLC1Q96QB1 1528 aa18.2■□□□□ 0.5
TSPAN9-207ENST00000539631 TRAK1Q9UPV9 953 aa18.2■□□□□ 0.5
TSPAN9-207ENST00000539631 PLEKHH1Q9ULM0 1364 aa18.19■□□□□ 0.5
TSPAN9-207ENST00000539631 WAPLQ7Z5K2 1190 aa18.19■□□□□ 0.5
TSPAN9-207ENST00000539631 C14orf37Q86TY3 774 aa18.19■□□□□ 0.5
TSPAN9-207ENST00000539631 MSH6P52701 1360 aa18.17■□□□□ 0.5
TSPAN9-207ENST00000539631 FAM135BQ49AJ0 1406 aa18.17■□□□□ 0.5
TSPAN9-207ENST00000539631 UBAP1LF5GYI3 381 aa18.17■□□□□ 0.5
TSPAN9-207ENST00000539631 SIRT1Q96EB6 747 aa18.17■□□□□ 0.5
TSPAN9-207ENST00000539631 RALGAPBQ86X10 1494 aa18.17■□□□□ 0.5
TSPAN9-207ENST00000539631 ROCK2O75116 1388 aaKnown RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms