RNA–Protein interactions for RNA: ENST00000539399.1

TM7SF3-207, Transcript of transmembrane 7 superfamily member 3, humanhuman

TSL 4

Gene TM7SF3, Length 553 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM7SF3-207ENST00000539399 ZFYVE9O95405 1425 aa38.28■■■■□ 3.72
TM7SF3-207ENST00000539399 NWD1Q149M9 1564 aa38.23■■■■□ 3.71
TM7SF3-207ENST00000539399 RIMS2Q9UQ26 1411 aa38.22■■■■□ 3.71
TM7SF3-207ENST00000539399 KCNA6P17658 529 aa38.22■■■■□ 3.71
TM7SF3-207ENST00000539399 SENP3Q9H4L4 574 aaPredicted RBP38.22■■■■□ 3.71
TM7SF3-207ENST00000539399 NUP155O75694 1391 aa38.21■■■■□ 3.71
TM7SF3-207ENST00000539399 SOCS7O14512 581 aa38.21■■■■□ 3.71
TM7SF3-207ENST00000539399 TMEM94Q12767 1356 aa38.19■■■■□ 3.7
TM7SF3-207ENST00000539399 BCANQ96GW7 911 aa38.19■■■■□ 3.7
TM7SF3-207ENST00000539399 PLEKHG1Q9ULL1 1385 aa38.18■■■■□ 3.7
TM7SF3-207ENST00000539399 NKTRP30414 1462 aaKnown RBP38.15■■■■□ 3.7
TM7SF3-207ENST00000539399 CHD2O14647 1828 aaKnown RBP38.15■■■■□ 3.7
TM7SF3-207ENST00000539399 CHGAP10645 457 aaKnown RBP38.14■■■■□ 3.7
TM7SF3-207ENST00000539399 RRBP1Q9P2E9 1410 aaKnown RBP38.13■■■■□ 3.7
TM7SF3-207ENST00000539399 PPP1R15AO75807 674 aaPredicted RBP38.13■■■■□ 3.69
TM7SF3-207ENST00000539399 PROSER2Q86WR7 435 aaPredicted RBP38.12■■■■□ 3.69
TM7SF3-207ENST00000539399 RBM33Q96EV2 1170 aaKnown RBP38.12■■■■□ 3.69
TM7SF3-207ENST00000539399 SPHKAPQ2M3C7 1700 aa38.09■■■■□ 3.69
TM7SF3-207ENST00000539399 HDGFP51858 240 aaKnown RBP38.09■■■■□ 3.69
TM7SF3-207ENST00000539399 ABCF1Q8NE71 845 aaKnown RBP eCLIP38.05■■■■□ 3.68
TM7SF3-207ENST00000539399 NUTM2DQ5VT03 806 aaPredicted RBP38.04■■■■□ 3.68
TM7SF3-207ENST00000539399 FAM135BQ49AJ0 1406 aa38.03■■■■□ 3.68
TM7SF3-207ENST00000539399 ROBO1Q9Y6N7 1651 aa38.02■■■■□ 3.68
TM7SF3-207ENST00000539399 ADAMTS13Q76LX8 1427 aa38■■■■□ 3.67
TM7SF3-207ENST00000539399 DIP2AQ14689 1571 aa37.99■■■■□ 3.67
TM7SF3-207ENST00000539399 TBX22Q9Y458 520 aa37.99■■■■□ 3.67
TM7SF3-207ENST00000539399 NAIPQ13075 1403 aa37.95■■■■□ 3.67
TM7SF3-207ENST00000539399 MSH6P52701 1360 aa37.95■■■■□ 3.67
TM7SF3-207ENST00000539399 PHF23Q9BUL5 403 aaPredicted RBP37.92■■■■□ 3.66
TM7SF3-207ENST00000539399 CLTCL1P53675 1640 aa37.9■■■■□ 3.66
TM7SF3-207ENST00000539399 TRPM2O94759 1503 aa37.88■■■■□ 3.65
TM7SF3-207ENST00000539399 NRXN3Q9Y4C0 1643 aa37.88■■■■□ 3.65
TM7SF3-207ENST00000539399 PIK3R4Q99570 1358 aa37.86■■■■□ 3.65
TM7SF3-207ENST00000539399 SETBP1Q9Y6X0 1596 aa37.82■■■■□ 3.65
TM7SF3-207ENST00000539399 NCOA3Q9Y6Q9 1424 aa37.82■■■■□ 3.64
TM7SF3-207ENST00000539399 SLAIN2Q9P270 581 aa37.82■■■■□ 3.64
TM7SF3-207ENST00000539399 KIF1BO60333 1816 aa37.82■■■■□ 3.64
TM7SF3-207ENST00000539399 SIPA1L2Q9P2F8 1722 aaPredicted RBP37.81■■■■□ 3.64
TM7SF3-207ENST00000539399 PTPRUQ92729 1446 aa37.81■■■■□ 3.64
TM7SF3-207ENST00000539399 PHLPP1O60346 1717 aa37.81■■■■□ 3.64
TM7SF3-207ENST00000539399 HFM1A2PYH4 1435 aa37.8■■■■□ 3.64
TM7SF3-207ENST00000539399 ZNF326Q5BKZ1 582 aaKnown RBP37.79■■■■□ 3.64
TM7SF3-207ENST00000539399 XRN1Q8IZH2 1706 aaKnown RBP37.77■■■■□ 3.64
TM7SF3-207ENST00000539399 NEXMIFQ5QGS0 1516 aa37.77■■■■□ 3.64
TM7SF3-207ENST00000539399 C14orf37Q86TY3 774 aa37.76■■■■□ 3.64
TM7SF3-207ENST00000539399 AMOTL2Q9Y2J4 779 aa37.75■■■■□ 3.63
TM7SF3-207ENST00000539399 TRIM52Q96A61 297 aa37.71■■■■□ 3.63
TM7SF3-207ENST00000539399 C19orf44Q9H6X5 657 aa37.68■■■■□ 3.62
TM7SF3-207ENST00000539399 RGS17Q9UGC6 210 aaPredicted RBP37.68■■■■□ 3.62
TM7SF3-207ENST00000539399 COL16A1Q07092 1604 aaPredicted RBP37.67■■■■□ 3.62
TM7SF3-207ENST00000539399 METP08581 1390 aa37.66■■■■□ 3.62
TM7SF3-207ENST00000539399 CADPS2Q86UW7 1296 aa37.64■■■■□ 3.62
TM7SF3-207ENST00000539399 ATF3P18847 181 aa37.63■■■■□ 3.61
TM7SF3-207ENST00000539399 SLC4A1APQ9BWU0 796 aaKnown RBP37.61■■■■□ 3.61
TM7SF3-207ENST00000539399 AHDC1Q5TGY3 1603 aaPredicted RBP37.58■■■■□ 3.61
TM7SF3-207ENST00000539399 JCADQ9P266 1359 aa37.57■■■■□ 3.61
TM7SF3-207ENST00000539399 SETD1AO15047 1707 aaKnown RBP37.57■■■■□ 3.6
TM7SF3-207ENST00000539399 DCCP43146 1447 aa37.56■■■■□ 3.6
TM7SF3-207ENST00000539399 PPLO60437 1756 aa37.55■■■■□ 3.6
TM7SF3-207ENST00000539399 NALCNQ8IZF0 1738 aa37.53■■■■□ 3.6
TM7SF3-207ENST00000539399 FOXD1Q16676 465 aa37.48■■■■□ 3.59
TM7SF3-207ENST00000539399 BRINP3Q76B58 766 aa37.48■■■■□ 3.59
TM7SF3-207ENST00000539399 SHPRHQ149N8 1683 aa37.47■■■■□ 3.59
TM7SF3-207ENST00000539399 MST1RQ04912 1400 aa37.46■■■■□ 3.59
TM7SF3-207ENST00000539399 ADGRL3Q9HAR2 1447 aa37.46■■■■□ 3.59
TM7SF3-207ENST00000539399 VGFO15240 615 aaPredicted RBP37.46■■■■□ 3.59
TM7SF3-207ENST00000539399 POTEAQ6S8J7 498 aa37.46■■■■□ 3.59
TM7SF3-207ENST00000539399 ASXL1Q8IXJ9 1541 aa37.46■■■■□ 3.59
TM7SF3-207ENST00000539399 RPGRIP1LQ68CZ1 1315 aa37.43■■■■□ 3.58
TM7SF3-207ENST00000539399 LRP6O75581 1613 aa37.43■■■■□ 3.58
TM7SF3-207ENST00000539399 NHSL1Q5SYE7 1610 aa37.42■■■■□ 3.58
TM7SF3-207ENST00000539399 PTCH1Q13635 1447 aa37.38■■■■□ 3.57
TM7SF3-207ENST00000539399 SPATA31A6Q5VVP1 1343 aa37.37■■■■□ 3.57
TM7SF3-207ENST00000539399 CCDC144AA2RUR9 1427 aa37.36■■■■□ 3.57
TM7SF3-207ENST00000539399 ROBO2Q9HCK4 1378 aa37.35■■■■□ 3.57
TM7SF3-207ENST00000539399 ACIN1Q9UKV3 1341 aaKnown RBP37.35■■■■□ 3.57
TM7SF3-207ENST00000539399 IFT172Q9UG01 1749 aa37.34■■■■□ 3.57
TM7SF3-207ENST00000539399 MPHOSPH9Q99550 1183 aa37.34■■■■□ 3.57
TM7SF3-207ENST00000539399 PRAG1Q86YV5 1406 aa37.33■■■■□ 3.57
TM7SF3-207ENST00000539399 SPATA31E1Q6ZUB1 1445 aa37.3■■■■□ 3.56
TM7SF3-207ENST00000539399 SETD5Q9C0A6 1442 aa37.27■■■■□ 3.56
TM7SF3-207ENST00000539399 MEX3CQ5U5Q3 659 aaKnown RBP37.27■■■■□ 3.56
TM7SF3-207ENST00000539399 C1orf167Q5SNV9 1468 aa37.26■■■■□ 3.55
TM7SF3-207ENST00000539399 RGL3Q3MIN7 710 aa37.25■■■■□ 3.55
TM7SF3-207ENST00000539399 DDX17Q92841 729 aaKnown RBP37.25■■■■□ 3.55
TM7SF3-207ENST00000539399 ADGRF5Q8IZF2 1346 aa37.25■■■■□ 3.55
TM7SF3-207ENST00000539399 LAMC1P11047 1609 aa37.21■■■■□ 3.55
TM7SF3-207ENST00000539399 NUTM2BA6NNL0 878 aaPredicted RBP37.2■■■■□ 3.55
TM7SF3-207ENST00000539399 NUTM2EB1AL46 878 aaPredicted RBP37.2■■■■□ 3.55
TM7SF3-207ENST00000539399 NUTM2AQ8IVF1 878 aaPredicted RBP37.2■■■■□ 3.55
TM7SF3-207ENST00000539399 ANKRD30BQ9BXX2 1392 aa37.18■■■■□ 3.54
TM7SF3-207ENST00000539399 LRRC59Q96AG4 307 aaKnown RBP37.17■■■■□ 3.54
TM7SF3-207ENST00000539399 PNPLA6Q8IY17 1366 aa37.14■■■■□ 3.54
TM7SF3-207ENST00000539399 CDC42BPGQ6DT37 1551 aa37.13■■■■□ 3.53
TM7SF3-207ENST00000539399 ZNF772Q68DY9 489 aaPredicted RBP37.13■■■■□ 3.53
TM7SF3-207ENST00000539399 ORAI2Q96SN7 254 aa37.13■■■■□ 3.53
TM7SF3-207ENST00000539399 PIK3C2GO75747 1445 aa37.12■■■■□ 3.53
TM7SF3-207ENST00000539399 KNDC1Q76NI1 1749 aa37.12■■■■□ 3.53
TM7SF3-207ENST00000539399 RAB3GAP2Q9H2M9 1393 aa37.11■■■■□ 3.53
TM7SF3-207ENST00000539399 TECPR2O15040 1411 aa37.1■■■■□ 3.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms