RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 UGGT1Q9NYU2 1555 aa24.18■■□□□ 1.46
GNE-204ENST00000539208 PPP4R2Q9NY27 417 aa24.18■■□□□ 1.46
GNE-204ENST00000539208 INSRP06213 1382 aa24.17■■□□□ 1.46
GNE-204ENST00000539208 ZMYM4Q5VZL5 1548 aa24.16■■□□□ 1.46
GNE-204ENST00000539208 NRXN1Q9ULB1 1477 aa24.16■■□□□ 1.46
GNE-204ENST00000539208 SLC24A1O60721 1099 aa24.15■■□□□ 1.46
GNE-204ENST00000539208 SYNMO15061 1565 aa24.15■■□□□ 1.46
GNE-204ENST00000539208 RNF123Q5XPI4 1314 aa24.14■■□□□ 1.46
GNE-204ENST00000539208 ABCA6Q8N139 1617 aa24.13■■□□□ 1.45
GNE-204ENST00000539208 ADGRB3O60242 1522 aa24.13■■□□□ 1.45
GNE-204ENST00000539208 MROH2AA6NES4 1674 aa24.12■■□□□ 1.45
GNE-204ENST00000539208 NPATQ14207 1427 aa24.11■■□□□ 1.45
GNE-204ENST00000539208 CC2D1BQ5T0F9 858 aaKnown RBP24.09■■□□□ 1.45
GNE-204ENST00000539208 ADGRF5Q8IZF2 1346 aa24.09■■□□□ 1.45
GNE-204ENST00000539208 ABCC3O15438 1527 aa24.08■■□□□ 1.45
GNE-204ENST00000539208 CFAP70Q5T0N1 1121 aa24.07■■□□□ 1.44
GNE-204ENST00000539208 MYOM1P52179 1685 aa24.06■■□□□ 1.44
GNE-204ENST00000539208 SETBP1Q9Y6X0 1596 aa24.06■■□□□ 1.44
GNE-204ENST00000539208 KNSTRNQ9Y448 316 aa24.05■■□□□ 1.44
GNE-204ENST00000539208 KDM5AP29375 1690 aaKnown RBP24.05■■□□□ 1.44
GNE-204ENST00000539208 MYO3AQ8NEV4 1616 aa24.05■■□□□ 1.44
GNE-204ENST00000539208 NPC1L1Q9UHC9 1359 aa24.04■■□□□ 1.44
GNE-204ENST00000539208 PDE3BQ13370 1112 aa24.04■■□□□ 1.44
GNE-204ENST00000539208 GGT6Q6P531 493 aa24.04■■□□□ 1.44
GNE-204ENST00000539208 DIP2CQ9Y2E4 1556 aa24.04■■□□□ 1.44
GNE-204ENST00000539208 BLMP54132 1417 aaPredicted RBP24.03■■□□□ 1.44
GNE-204ENST00000539208 PPLO60437 1756 aa24.03■■□□□ 1.44
GNE-204ENST00000539208 RPGRIP1LQ68CZ1 1315 aa24.02■■□□□ 1.44
GNE-204ENST00000539208 CAMSAP1Q5T5Y3 1602 aa24.02■■□□□ 1.44
GNE-204ENST00000539208 AMER1Q5JTC6 1135 aaPredicted RBP24.02■■□□□ 1.44
GNE-204ENST00000539208 RICTORQ6R327 1708 aa24.02■■□□□ 1.44
GNE-204ENST00000539208 SBNO2Q9Y2G9 1366 aa24.02■■□□□ 1.44
GNE-204ENST00000539208 NOS1P29475 1434 aa24.02■■□□□ 1.44
GNE-204ENST00000539208 ASXL1Q8IXJ9 1541 aa24.02■■□□□ 1.44
GNE-204ENST00000539208 GLI2P10070 1586 aa24.01■■□□□ 1.43
GNE-204ENST00000539208 RAPGEF3O95398 923 aa24.01■■□□□ 1.43
GNE-204ENST00000539208 ERVK-7P63135 1459 aa24■■□□□ 1.43
GNE-204ENST00000539208 PIK3C2GO75747 1445 aa23.99■■□□□ 1.43
GNE-204ENST00000539208 ARHGAP31Q2M1Z3 1444 aa23.97■■□□□ 1.43
GNE-204ENST00000539208 ZC3H13Q5T200 1668 aaKnown RBP23.97■■□□□ 1.43
GNE-204ENST00000539208 PIK3C2BO00750 1634 aa23.97■■□□□ 1.43
GNE-204ENST00000539208 C14orf93Q9H972 538 aaKnown RBP23.96■■□□□ 1.43
GNE-204ENST00000539208 RBM19Q9Y4C8 960 aaKnown RBP23.96■■□□□ 1.43
GNE-204ENST00000539208 PPP2R1AP30153 589 aa23.95■■□□□ 1.42
GNE-204ENST00000539208 SIGLEC1Q9BZZ2 1709 aa23.94■■□□□ 1.42
GNE-204ENST00000539208 CHGAP10645 457 aaKnown RBP23.93■■□□□ 1.42
GNE-204ENST00000539208 SENP3-EIF4A1A0A087X0R7 540 aa23.93■■□□□ 1.42
GNE-204ENST00000539208 CFAP65Q6ZU64 1925 aaKnown RBP23.93■■□□□ 1.42
GNE-204ENST00000539208 ADGRB1O14514 1584 aa23.93■■□□□ 1.42
GNE-204ENST00000539208 B4GALNT3Q6L9W6 998 aa23.91■■□□□ 1.42
GNE-204ENST00000539208 CENPJQ9HC77 1338 aaPredicted RBP23.9■■□□□ 1.42
GNE-204ENST00000539208 YEATS2Q9ULM3 1422 aa23.87■■□□□ 1.41
GNE-204ENST00000539208 ADAMTS8Q9UP79 889 aa23.86■■□□□ 1.41
GNE-204ENST00000539208 RCAN3Q9UKA8 241 aa23.86■■□□□ 1.41
GNE-204ENST00000539208 NEXMIFQ5QGS0 1516 aa23.85■■□□□ 1.41
GNE-204ENST00000539208 VGFO15240 615 aaPredicted RBP23.85■■□□□ 1.41
GNE-204ENST00000539208 CYB5RLQ6IPT4 315 aa23.85■■□□□ 1.41
GNE-204ENST00000539208 QRICH2Q9H0J4 1663 aa23.84■■□□□ 1.41
GNE-204ENST00000539208 RRP1P56182 461 aaKnown RBP23.84■■□□□ 1.41
GNE-204ENST00000539208 SALL2Q9Y467 1007 aaPredicted RBP23.84■■□□□ 1.41
GNE-204ENST00000539208 WDR43Q15061 677 aaKnown RBP eCLIP23.83■■□□□ 1.41
GNE-204ENST00000539208 SLC52A1Q9NWF4 448 aa23.83■■□□□ 1.41
GNE-204ENST00000539208 ZFYVE9O95405 1425 aa23.83■■□□□ 1.41
GNE-204ENST00000539208 CARD14Q9BXL6 1004 aa23.82■■□□□ 1.4
GNE-204ENST00000539208 RIMBP3CA6NJZ7 1639 aa23.82■■□□□ 1.4
GNE-204ENST00000539208 RIMBP3BA6NNM3 1639 aa23.82■■□□□ 1.4
GNE-204ENST00000539208 RIMBP3Q9UFD9 1639 aa23.82■■□□□ 1.4
GNE-204ENST00000539208 TRAK1Q9UPV9 953 aa23.81■■□□□ 1.4
GNE-204ENST00000539208 CDCA7LQ96GN5 454 aa23.8■■□□□ 1.4
GNE-204ENST00000539208 PUS7Q96PZ0 661 aaKnown RBP23.8■■□□□ 1.4
GNE-204ENST00000539208 DIP2BQ9P265 1576 aa23.8■■□□□ 1.4
GNE-204ENST00000539208 IDI1Q13907 227 aa23.78■■□□□ 1.4
GNE-204ENST00000539208 CCDC136Q96JN2 1154 aa23.78■■□□□ 1.4
GNE-204ENST00000539208 PREX1Q8TCU6 1659 aa23.77■■□□□ 1.4
GNE-204ENST00000539208 TMEM132EQ6IEE7 984 aa23.76■■□□□ 1.39
GNE-204ENST00000539208 REREQ9P2R6 1566 aa23.76■■□□□ 1.39
GNE-204ENST00000539208 FAM69CQ0P6D2 419 aa23.75■■□□□ 1.39
GNE-204ENST00000539208 ARHGEF28Q8N1W1 1705 aaKnown RBP23.74■■□□□ 1.39
GNE-204ENST00000539208 MYT1Q01538 1121 aa23.74■■□□□ 1.39
GNE-204ENST00000539208 TMEM131LA2VDJ0 1609 aa23.74■■□□□ 1.39
GNE-204ENST00000539208 ZNF521Q96K83 1311 aa23.74■■□□□ 1.39
GNE-204ENST00000539208 USP32Q8NFA0 1604 aa23.73■■□□□ 1.39
GNE-204ENST00000539208 PLEKHH1Q9ULM0 1364 aa23.72■■□□□ 1.39
GNE-204ENST00000539208 PPP6R1Q9UPN7 881 aa23.71■■□□□ 1.39
GNE-204ENST00000539208 AGLP35573 1532 aa23.71■■□□□ 1.39
GNE-204ENST00000539208 FANCIQ9NVI1 1328 aa23.71■■□□□ 1.39
GNE-204ENST00000539208 POLR3AO14802 1390 aaPredicted RBP23.7■■□□□ 1.38
GNE-204ENST00000539208 NSD3Q9BZ95 1437 aa23.7■■□□□ 1.38
GNE-204ENST00000539208 EVC2Q86UK5 1308 aa23.69■■□□□ 1.38
GNE-204ENST00000539208 NGEFQ8N5V2 710 aa23.68■■□□□ 1.38
GNE-204ENST00000539208 SLC12A5Q9H2X9 1139 aa23.68■■□□□ 1.38
GNE-204ENST00000539208 MYO5BQ9ULV0 1848 aa23.68■■□□□ 1.38
GNE-204ENST00000539208 TULP4Q9NRJ4 1543 aa23.67■■□□□ 1.38
GNE-204ENST00000539208 NUTM2DQ5VT03 806 aaPredicted RBP23.66■■□□□ 1.38
GNE-204ENST00000539208 EXOC6Q8TAG9 804 aa23.66■■□□□ 1.38
GNE-204ENST00000539208 GOLGA2Q08379 1002 aa23.65■■□□□ 1.38
GNE-204ENST00000539208 DUSP27Q5VZP5 1158 aa23.65■■□□□ 1.38
GNE-204ENST00000539208 MORC1Q86VD1 984 aa23.62■■□□□ 1.37
GNE-204ENST00000539208 ANKRD36BQ8N2N9 1353 aa23.62■■□□□ 1.37
GNE-204ENST00000539208 TSPOAP1O95153 1857 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms