RNA–Protein interactions for RNA: ENST00000538418.1

CD9-207, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-207ENST00000538418 CSPP1Q1MSJ5 1256 aa14.65□□□□□ -0.06
CD9-207ENST00000538418 PCDHGA4Q9Y5G9 962 aa14.65□□□□□ -0.06
CD9-207ENST00000538418 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.64□□□□□ -0.07
CD9-207ENST00000538418 AP1G2O75843 785 aa14.64□□□□□ -0.07
CD9-207ENST00000538418 KCNA1Q09470 495 aa14.64□□□□□ -0.07
CD9-207ENST00000538418 COLQQ9Y215 455 aaPredicted RBP14.64□□□□□ -0.07
CD9-207ENST00000538418 LILRB3O75022 631 aa14.63□□□□□ -0.07
CD9-207ENST00000538418 BRD1O95696 1058 aa14.63□□□□□ -0.07
CD9-207ENST00000538418 NUTM1Q86Y26 1132 aa14.63□□□□□ -0.07
CD9-207ENST00000538418 RBM25P49756 843 aaKnown RBP14.62□□□□□ -0.07
CD9-207ENST00000538418 FOSBP53539 338 aa14.62□□□□□ -0.07
CD9-207ENST00000538418 QPCTQ16769 361 aa14.62□□□□□ -0.07
CD9-207ENST00000538418 ZNF710Q8N1W2 664 aa14.62□□□□□ -0.07
CD9-207ENST00000538418 USTQ9Y2C2 406 aa14.62□□□□□ -0.07
CD9-207ENST00000538418 MOXD2PA6NHM9 499 aa14.61□□□□□ -0.07
CD9-207ENST00000538418 GJA5P36382 358 aa14.61□□□□□ -0.07
CD9-207ENST00000538418 PRSS12P56730 875 aa14.61□□□□□ -0.07
CD9-207ENST00000538418 C3orf67Q6ZVT6 689 aa14.61□□□□□ -0.07
CD9-207ENST00000538418 HDGFL1Q5TGJ6 251 aa14.6□□□□□ -0.07
CD9-207ENST00000538418 KDM4FA0A1W2PPD8 638 aa14.59□□□□□ -0.07
CD9-207ENST00000538418 USP17L8P0C7I0 530 aa14.59□□□□□ -0.07
CD9-207ENST00000538418 SULF1Q8IWU6 871 aa14.59□□□□□ -0.07
CD9-207ENST00000538418 ZDHHC16Q969W1 377 aa14.59□□□□□ -0.07
CD9-207ENST00000538418 RCCD1A6NED2 376 aa14.58□□□□□ -0.08
CD9-207ENST00000538418 RTL5Q5HYW3 569 aaPredicted RBP14.58□□□□□ -0.08
CD9-207ENST00000538418 ZNF428Q96B54 188 aa14.58□□□□□ -0.08
CD9-207ENST00000538418 CDCA7LQ96GN5 454 aa14.58□□□□□ -0.08
CD9-207ENST00000538418 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.57□□□□□ -0.08
CD9-207ENST00000538418 CSB-PGBD3P0DP91 1061 aa14.57□□□□□ -0.08
CD9-207ENST00000538418 RFX1P22670 979 aa14.57□□□□□ -0.08
CD9-207ENST00000538418 NDUFV2P19404 249 aa14.56□□□□□ -0.08
CD9-207ENST00000538418 ADAMTS19Q8TE59 1207 aa14.56□□□□□ -0.08
CD9-207ENST00000538418 PCDHB15Q9Y5E8 787 aa14.56□□□□□ -0.08
CD9-207ENST00000538418 NDUFB9Q9Y6M9 179 aa14.56□□□□□ -0.08
CD9-207ENST00000538418 NUTM2BA6NNL0 878 aaPredicted RBP14.55□□□□□ -0.08
CD9-207ENST00000538418 NUTM2EB1AL46 878 aaPredicted RBP14.55□□□□□ -0.08
CD9-207ENST00000538418 CFAP70Q5T0N1 1121 aa14.55□□□□□ -0.08
CD9-207ENST00000538418 NUTM2DQ5VT03 806 aaPredicted RBP14.55□□□□□ -0.08
CD9-207ENST00000538418 NUTM2AQ8IVF1 878 aaPredicted RBP14.55□□□□□ -0.08
CD9-207ENST00000538418 SRPK2P78362 688 aaKnown RBP14.54□□□□□ -0.08
CD9-207ENST00000538418 WASHC4Q2M389 1173 aa14.54□□□□□ -0.08
CD9-207ENST00000538418 ZNF454Q8N9F8 522 aa14.54□□□□□ -0.08
CD9-207ENST00000538418 GJD4Q96KN9 370 aaPredicted RBP14.54□□□□□ -0.08
CD9-207ENST00000538418 DDX11L8A8MPP1 907 aa14.52□□□□□ -0.09
CD9-207ENST00000538418 EYA1Q99502 592 aa14.52□□□□□ -0.09
CD9-207ENST00000538418 PRPF38BQ5VTL8 546 aaKnown RBP14.51□□□□□ -0.09
CD9-207ENST00000538418 ADAM33Q9BZ11 813 aa14.51□□□□□ -0.09
CD9-207ENST00000538418 CABLES1Q8TDN4 633 aa14.5□□□□□ -0.09
CD9-207ENST00000538418 PPP1R12CQ9BZL4 782 aa14.5□□□□□ -0.09
CD9-207ENST00000538418 FAM198AQ9UFP1 575 aa14.49□□□□□ -0.09
CD9-207ENST00000538418 PELP1Q8IZL8 1130 aaKnown RBP14.48□□□□□ -0.09
CD9-207ENST00000538418 E9PSI1 815 aa14.47□□□□□ -0.09
CD9-207ENST00000538418 EVX2Q03828 476 aa14.47□□□□□ -0.09
CD9-207ENST00000538418 POTEFA5A3E0 1075 aa14.46□□□□□ -0.09
CD9-207ENST00000538418 ZBTB3Q9H5J0 574 aa14.46□□□□□ -0.09
CD9-207ENST00000538418 HAX1O00165 279 aa14.45□□□□□ -0.1
CD9-207ENST00000538418 DNAJB2P25686 324 aa14.45□□□□□ -0.1
CD9-207ENST00000538418 CARNS1A5YM72 827 aa14.44□□□□□ -0.1
CD9-207ENST00000538418 SLC39A7Q92504 469 aa14.44□□□□□ -0.1
CD9-207ENST00000538418 VAC14Q08AM6 782 aa14.43□□□□□ -0.1
CD9-207ENST00000538418 IVNS1ABPQ9Y6Y0 642 aa14.43□□□□□ -0.1
CD9-207ENST00000538418 PALM3A6NDB9 673 aaPredicted RBP14.42□□□□□ -0.1
CD9-207ENST00000538418 GPR37L1O60883 481 aa14.42□□□□□ -0.1
CD9-207ENST00000538418 CCDC27Q2M243 656 aa14.42□□□□□ -0.1
CD9-207ENST00000538418 HMX1Q9NP08 348 aaPredicted RBP14.42□□□□□ -0.1
CD9-207ENST00000538418 KDM4AO75164 1064 aa14.41□□□□□ -0.1
CD9-207ENST00000538418 NUDT18Q6ZVK8 323 aa14.41□□□□□ -0.1
CD9-207ENST00000538418 TRIM34Q9BYJ4 488 aa14.41□□□□□ -0.1
CD9-207ENST00000538418 ALG2Q9H553 416 aa14.41□□□□□ -0.1
CD9-207ENST00000538418 TMEM134Q9H6X4 195 aa14.41□□□□□ -0.1
CD9-207ENST00000538418 AMOTL2Q9Y2J4 779 aa14.41□□□□□ -0.1
CD9-207ENST00000538418 LMOD1P29536 600 aaPredicted RBP14.4□□□□□ -0.1
CD9-207ENST00000538418 LOC105371045A0A1W2PR82 267 aa14.39□□□□□ -0.11
CD9-207ENST00000538418 CTDSPL2Q05D32 466 aa14.39□□□□□ -0.11
CD9-207ENST00000538418 RDH13Q8NBN7 331 aa14.39□□□□□ -0.11
CD9-207ENST00000538418 VRTNQ9H8Y1 702 aa14.39□□□□□ -0.11
CD9-207ENST00000538418 TSKSQ9UJT2 592 aa14.39□□□□□ -0.11
CD9-207ENST00000538418 IGSF3O75054 1194 aa14.38□□□□□ -0.11
CD9-207ENST00000538418 C7P10643 843 aa14.38□□□□□ -0.11
CD9-207ENST00000538418 FDX1P10109 184 aa14.37□□□□□ -0.11
CD9-207ENST00000538418 USP46P62068 366 aa14.37□□□□□ -0.11
CD9-207ENST00000538418 SND1Q7KZF4 910 aaKnown RBP eCLIP14.37□□□□□ -0.11
CD9-207ENST00000538418 C3orf80F5H4A9 247 aa14.36□□□□□ -0.11
CD9-207ENST00000538418 NUDT7P0C024 238 aa14.36□□□□□ -0.11
CD9-207ENST00000538418 COL9A1P20849 921 aa14.36□□□□□ -0.11
CD9-207ENST00000538418 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.36□□□□□ -0.11
CD9-207ENST00000538418 TFIP11Q9UBB9 837 aaKnown RBP14.36□□□□□ -0.11
CD9-207ENST00000538418 NBPF26B4DH59 902 aa14.35□□□□□ -0.11
CD9-207ENST00000538418 HOXA2O43364 376 aa14.35□□□□□ -0.11
CD9-207ENST00000538418 ATG7O95352 703 aa14.35□□□□□ -0.11
CD9-207ENST00000538418 TMEM88BA6NKF7 163 aa14.34□□□□□ -0.11
CD9-207ENST00000538418 TATDN2Q93075 761 aa14.34□□□□□ -0.11
CD9-207ENST00000538418 UCN2Q96RP3 112 aa14.34□□□□□ -0.11
CD9-207ENST00000538418 PNMA3Q9UL41 463 aa14.34□□□□□ -0.11
CD9-207ENST00000538418 RB1CC1Q8TDY2 1594 aa14.34□□□□□ -0.11
CD9-207ENST00000538418 HELBQ8NG08 1087 aaPredicted RBP14.33□□□□□ -0.12
CD9-207ENST00000538418 DCBLD2Q96PD2 775 aa14.33□□□□□ -0.12
CD9-207ENST00000538418 SOX11P35716 441 aa14.32□□□□□ -0.12
CD9-207ENST00000538418 GCGRP47871 477 aa14.32□□□□□ -0.12
CD9-207ENST00000538418 PCDHGC3Q9UN70 934 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms