RNA–Protein interactions for RNA: ENST00000538335.1

LINC01089-207, Transcript of long intergenic non-protein coding RNA 1089, humanhuman

TSL 3 BASIC

Gene LINC01089, Length 630 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01089-207ENST00000538335 RIMS2Q9UQ26 1411 aa42.75■■■■■ 4.43
LINC01089-207ENST00000538335 KCNA6P17658 529 aa42.75■■■■■ 4.43
LINC01089-207ENST00000538335 TMEM131LA2VDJ0 1609 aa42.75■■■■■ 4.43
LINC01089-207ENST00000538335 ZFYVE9O95405 1425 aa42.74■■■■■ 4.43
LINC01089-207ENST00000538335 HSPA1LP34931 641 aa42.72■■■■■ 4.43
LINC01089-207ENST00000538335 PLEKHG1Q9ULL1 1385 aa42.72■■■■■ 4.43
LINC01089-207ENST00000538335 MYO5BQ9ULV0 1848 aa42.66■■■■■ 4.42
LINC01089-207ENST00000538335 ALKQ9UM73 1620 aa42.65■■■■■ 4.42
LINC01089-207ENST00000538335 NAIPQ13075 1403 aa42.64■■■■■ 4.42
LINC01089-207ENST00000538335 PROSER2Q86WR7 435 aaPredicted RBP42.62■■■■■ 4.41
LINC01089-207ENST00000538335 NKTRP30414 1462 aaKnown RBP42.62■■■■■ 4.41
LINC01089-207ENST00000538335 TMEM94Q12767 1356 aa42.61■■■■■ 4.41
LINC01089-207ENST00000538335 NWD1Q149M9 1564 aa42.57■■■■■ 4.41
LINC01089-207ENST00000538335 TBX22Q9Y458 520 aa42.57■■■■■ 4.41
LINC01089-207ENST00000538335 HFM1A2PYH4 1435 aa42.55■■■■■ 4.4
LINC01089-207ENST00000538335 SPHKAPQ2M3C7 1700 aa42.54■■■■■ 4.4
LINC01089-207ENST00000538335 SENP3Q9H4L4 574 aaPredicted RBP42.52■■■■■ 4.4
LINC01089-207ENST00000538335 XIRP1Q702N8 1843 aaKnown RBP42.52■■■■■ 4.4
LINC01089-207ENST00000538335 DIP2AQ14689 1571 aa42.48■■■■■ 4.39
LINC01089-207ENST00000538335 NUTM2DQ5VT03 806 aaPredicted RBP42.48■■■■■ 4.39
LINC01089-207ENST00000538335 TRIM52Q96A61 297 aa42.48■■■■■ 4.39
LINC01089-207ENST00000538335 MSH6P52701 1360 aa42.45■■■■■ 4.39
LINC01089-207ENST00000538335 PIK3R4Q99570 1358 aa42.45■■■■■ 4.39
LINC01089-207ENST00000538335 ZNF326Q5BKZ1 582 aaKnown RBP42.44■■■■■ 4.38
LINC01089-207ENST00000538335 CHD2O14647 1828 aaKnown RBP42.42■■■■■ 4.38
LINC01089-207ENST00000538335 ILDR2Q71H61 639 aa42.42■■■■■ 4.38
LINC01089-207ENST00000538335 ADAMTS13Q76LX8 1427 aa42.42■■■■■ 4.38
LINC01089-207ENST00000538335 FAM135BQ49AJ0 1406 aa42.41■■■■■ 4.38
LINC01089-207ENST00000538335 TRPM2O94759 1503 aa42.4■■■■■ 4.38
LINC01089-207ENST00000538335 RBM33Q96EV2 1170 aaKnown RBP42.39■■■■■ 4.38
LINC01089-207ENST00000538335 NCOA3Q9Y6Q9 1424 aa42.37■■■■■ 4.37
LINC01089-207ENST00000538335 SLC4A1APQ9BWU0 796 aaKnown RBP42.36■■■■■ 4.37
LINC01089-207ENST00000538335 MED1Q15648 1581 aaPredicted RBP42.35■■■■■ 4.37
LINC01089-207ENST00000538335 CLTCL1P53675 1640 aa42.31■■■■■ 4.36
LINC01089-207ENST00000538335 C14orf37Q86TY3 774 aa42.3■■■■■ 4.36
LINC01089-207ENST00000538335 SETBP1Q9Y6X0 1596 aa42.27■■■■■ 4.36
LINC01089-207ENST00000538335 SOCS7O14512 581 aa42.25■■■■■ 4.35
LINC01089-207ENST00000538335 PHF23Q9BUL5 403 aaPredicted RBP42.24■■■■■ 4.35
LINC01089-207ENST00000538335 SLAIN2Q9P270 581 aa42.24■■■■■ 4.35
LINC01089-207ENST00000538335 AMOTL2Q9Y2J4 779 aa42.24■■■■■ 4.35
LINC01089-207ENST00000538335 KIF1BO60333 1816 aa42.24■■■■■ 4.35
LINC01089-207ENST00000538335 ACIN1Q9UKV3 1341 aaKnown RBP42.21■■■■■ 4.35
LINC01089-207ENST00000538335 ROBO1Q9Y6N7 1651 aa42.19■■■■■ 4.34
LINC01089-207ENST00000538335 C19orf44Q9H6X5 657 aa42.19■■■■■ 4.34
LINC01089-207ENST00000538335 CADPS2Q86UW7 1296 aa42.18■■■■■ 4.34
LINC01089-207ENST00000538335 NEXMIFQ5QGS0 1516 aa42.18■■■■■ 4.34
LINC01089-207ENST00000538335 VGFO15240 615 aaPredicted RBP42.15■■■■■ 4.34
LINC01089-207ENST00000538335 ATF3P18847 181 aa42.15■■■■■ 4.34
LINC01089-207ENST00000538335 NRXN3Q9Y4C0 1643 aa42.15■■■■■ 4.34
LINC01089-207ENST00000538335 RPGRIP1LQ68CZ1 1315 aa42.15■■■■■ 4.34
LINC01089-207ENST00000538335 PTPRUQ92729 1446 aa42.14■■■■■ 4.34
LINC01089-207ENST00000538335 METP08581 1390 aa42.06■■■■■ 4.32
LINC01089-207ENST00000538335 XRN1Q8IZH2 1706 aaKnown RBP42.06■■■■■ 4.32
LINC01089-207ENST00000538335 MPHOSPH9Q99550 1183 aa42.04■■■■■ 4.32
LINC01089-207ENST00000538335 DCCP43146 1447 aa42.03■■■■■ 4.32
LINC01089-207ENST00000538335 SIPA1L2Q9P2F8 1722 aaPredicted RBP42.03■■■■■ 4.32
LINC01089-207ENST00000538335 CCDC144AA2RUR9 1427 aa42.03■■■■■ 4.32
LINC01089-207ENST00000538335 FOXD1Q16676 465 aa42■■■■■ 4.31
LINC01089-207ENST00000538335 SETD5Q9C0A6 1442 aa41.96■■■■■ 4.31
LINC01089-207ENST00000538335 PHLPP1O60346 1717 aa41.96■■■■■ 4.31
LINC01089-207ENST00000538335 JCADQ9P266 1359 aa41.94■■■■■ 4.3
LINC01089-207ENST00000538335 PPLO60437 1756 aa41.88■■■■■ 4.29
LINC01089-207ENST00000538335 ADGRL3Q9HAR2 1447 aa41.87■■■■■ 4.29
LINC01089-207ENST00000538335 PTCH1Q13635 1447 aa41.86■■■■■ 4.29
LINC01089-207ENST00000538335 ANKRD30BQ9BXX2 1392 aa41.85■■■■■ 4.29
LINC01089-207ENST00000538335 AHDC1Q5TGY3 1603 aaPredicted RBP41.84■■■■■ 4.29
LINC01089-207ENST00000538335 RGL3Q3MIN7 710 aa41.83■■■■■ 4.29
LINC01089-207ENST00000538335 BRINP3Q76B58 766 aa41.83■■■■■ 4.29
LINC01089-207ENST00000538335 COL16A1Q07092 1604 aaPredicted RBP41.81■■■■■ 4.28
LINC01089-207ENST00000538335 SPATA31E1Q6ZUB1 1445 aa41.81■■■■■ 4.28
LINC01089-207ENST00000538335 MST1RQ04912 1400 aa41.79■■■■■ 4.28
LINC01089-207ENST00000538335 PRAG1Q86YV5 1406 aa41.79■■■■■ 4.28
LINC01089-207ENST00000538335 SETD1AO15047 1707 aaKnown RBP41.79■■■■■ 4.28
LINC01089-207ENST00000538335 RAB3GAP2Q9H2M9 1393 aa41.76■■■■■ 4.28
LINC01089-207ENST00000538335 SPATA31A6Q5VVP1 1343 aa41.75■■■■■ 4.27
LINC01089-207ENST00000538335 ROBO2Q9HCK4 1378 aa41.74■■■■■ 4.27
LINC01089-207ENST00000538335 ASXL1Q8IXJ9 1541 aa41.74■■■■■ 4.27
LINC01089-207ENST00000538335 ADGRF5Q8IZF2 1346 aa41.73■■■■■ 4.27
LINC01089-207ENST00000538335 RGS17Q9UGC6 210 aaPredicted RBP41.72■■■■■ 4.27
LINC01089-207ENST00000538335 NALCNQ8IZF0 1738 aa41.71■■■■■ 4.27
LINC01089-207ENST00000538335 IFT172Q9UG01 1749 aa41.64■■■■■ 4.26
LINC01089-207ENST00000538335 SHPRHQ149N8 1683 aa41.62■■■■■ 4.25
LINC01089-207ENST00000538335 MEX3CQ5U5Q3 659 aaKnown RBP41.62■■■■■ 4.25
LINC01089-207ENST00000538335 C1orf167Q5SNV9 1468 aa41.61■■■■■ 4.25
LINC01089-207ENST00000538335 PIK3C2GO75747 1445 aa41.61■■■■■ 4.25
LINC01089-207ENST00000538335 LRRC59Q96AG4 307 aaKnown RBP41.6■■■■■ 4.25
LINC01089-207ENST00000538335 HRCP23327 699 aa41.59■■■■■ 4.25
LINC01089-207ENST00000538335 NHSL1Q5SYE7 1610 aa41.58■■■■■ 4.25
LINC01089-207ENST00000538335 LRPPRCP42704 1394 aaKnown RBP41.58■■■■■ 4.25
LINC01089-207ENST00000538335 TECPR2O15040 1411 aa41.56■■■■■ 4.24
LINC01089-207ENST00000538335 STK26Q9P289 416 aa41.55■■■■■ 4.24
LINC01089-207ENST00000538335 ABCC11Q96J66 1382 aa41.54■■■■■ 4.24
LINC01089-207ENST00000538335 POTEAQ6S8J7 498 aa41.53■■■■■ 4.24
LINC01089-207ENST00000538335 MYOM2P54296 1465 aa41.51■■■■■ 4.24
LINC01089-207ENST00000538335 LRP6O75581 1613 aa41.51■■■■■ 4.23
LINC01089-207ENST00000538335 TMEM132EQ6IEE7 984 aa41.48■■■■■ 4.23
LINC01089-207ENST00000538335 CDC42BPGQ6DT37 1551 aa41.47■■■■■ 4.23
LINC01089-207ENST00000538335 ZNF772Q68DY9 489 aaPredicted RBP41.47■■■■■ 4.23
LINC01089-207ENST00000538335 C14orf93Q9H972 538 aaKnown RBP41.47■■■■■ 4.23
LINC01089-207ENST00000538335 YTHDC2Q9H6S0 1430 aaKnown RBP41.45■■■■■ 4.23
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms