RNA–Protein interactions for RNA: ENST00000538036.1

VPS37C-204, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 506 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-204ENST00000538036 RPRD2Q5VT52 1461 aaKnown RBP15.94■□□□□ 0.14
VPS37C-204ENST00000538036 ADGRB3O60242 1522 aa15.94■□□□□ 0.14
VPS37C-204ENST00000538036 RBM33Q96EV2 1170 aaKnown RBP15.93■□□□□ 0.14
VPS37C-204ENST00000538036 ROBO1Q9Y6N7 1651 aa15.92■□□□□ 0.14
VPS37C-204ENST00000538036 NWD1Q149M9 1564 aa15.92■□□□□ 0.14
VPS37C-204ENST00000538036 PLEKHG1Q9ULL1 1385 aa15.92■□□□□ 0.14
VPS37C-204ENST00000538036 NCOA3Q9Y6Q9 1424 aa15.92■□□□□ 0.14
VPS37C-204ENST00000538036 ADGRL2O95490 1459 aa15.91■□□□□ 0.14
VPS37C-204ENST00000538036 JCADQ9P266 1359 aa15.91■□□□□ 0.14
VPS37C-204ENST00000538036 TBX22Q9Y458 520 aa15.91■□□□□ 0.14
VPS37C-204ENST00000538036 PPP1R15AO75807 674 aaPredicted RBP15.9■□□□□ 0.14
VPS37C-204ENST00000538036 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.9■□□□□ 0.14
VPS37C-204ENST00000538036 ZFYVE9O95405 1425 aa15.9■□□□□ 0.14
VPS37C-204ENST00000538036 ANKRD50Q9ULJ7 1429 aa15.89■□□□□ 0.13
VPS37C-204ENST00000538036 RIMS2Q9UQ26 1411 aa15.87■□□□□ 0.13
VPS37C-204ENST00000538036 SPATA31A6Q5VVP1 1343 aa15.86■□□□□ 0.13
VPS37C-204ENST00000538036 FAM50AQ14320 339 aaKnown RBP15.85■□□□□ 0.13
VPS37C-204ENST00000538036 CADPS2Q86UW7 1296 aa15.85■□□□□ 0.13
VPS37C-204ENST00000538036 C19orf44Q9H6X5 657 aa15.85■□□□□ 0.13
VPS37C-204ENST00000538036 PIK3R4Q99570 1358 aa15.85■□□□□ 0.13
VPS37C-204ENST00000538036 C14orf37Q86TY3 774 aa15.84■□□□□ 0.13
VPS37C-204ENST00000538036 ZNF772Q68DY9 489 aaPredicted RBP15.83■□□□□ 0.12
VPS37C-204ENST00000538036 PHLPP1O60346 1717 aa15.82■□□□□ 0.12
VPS37C-204ENST00000538036 CHD2O14647 1828 aaKnown RBP15.82■□□□□ 0.12
VPS37C-204ENST00000538036 ATF3P18847 181 aa15.82■□□□□ 0.12
VPS37C-204ENST00000538036 TMEM131LA2VDJ0 1609 aa15.81■□□□□ 0.12
VPS37C-204ENST00000538036 CHGAP10645 457 aaKnown RBP15.81■□□□□ 0.12
VPS37C-204ENST00000538036 MEX3CQ5U5Q3 659 aaKnown RBP15.8■□□□□ 0.12
VPS37C-204ENST00000538036 ADAMTS13Q76LX8 1427 aa15.79■□□□□ 0.12
VPS37C-204ENST00000538036 COL16A1Q07092 1604 aaPredicted RBP15.79■□□□□ 0.12
VPS37C-204ENST00000538036 DIP2AQ14689 1571 aa15.79■□□□□ 0.12
VPS37C-204ENST00000538036 AMOTL2Q9Y2J4 779 aa15.77■□□□□ 0.12
VPS37C-204ENST00000538036 GCC2Q8IWJ2 1684 aa15.76■□□□□ 0.11
VPS37C-204ENST00000538036 ROCK1Q13464 1354 aa15.76■□□□□ 0.11
VPS37C-204ENST00000538036 AHDC1Q5TGY3 1603 aaPredicted RBP15.76■□□□□ 0.11
VPS37C-204ENST00000538036 NUTM2DQ5VT03 806 aaPredicted RBP15.75■□□□□ 0.11
VPS37C-204ENST00000538036 UNC13BO14795 1591 aa15.75■□□□□ 0.11
VPS37C-204ENST00000538036 RXRBP28702 533 aa15.74■□□□□ 0.11
VPS37C-204ENST00000538036 BRINP3Q76B58 766 aa15.74■□□□□ 0.11
VPS37C-204ENST00000538036 UPF1Q92900 1129 aaKnown RBP eCLIP15.74■□□□□ 0.11
VPS37C-204ENST00000538036 LRP6O75581 1613 aa15.74■□□□□ 0.11
VPS37C-204ENST00000538036 DCCP43146 1447 aa15.74■□□□□ 0.11
VPS37C-204ENST00000538036 TRPM2O94759 1503 aa15.73■□□□□ 0.11
VPS37C-204ENST00000538036 MYO5BQ9ULV0 1848 aa15.73■□□□□ 0.11
VPS37C-204ENST00000538036 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.73■□□□□ 0.11
VPS37C-204ENST00000538036 NUP155O75694 1391 aa15.72■□□□□ 0.11
VPS37C-204ENST00000538036 TRIM52Q96A61 297 aa15.71■□□□□ 0.11
VPS37C-204ENST00000538036 E9PCH4 1651 aa15.7■□□□□ 0.1
VPS37C-204ENST00000538036 SHPRHQ149N8 1683 aa15.7■□□□□ 0.1
VPS37C-204ENST00000538036 PTPRUQ92729 1446 aa15.7■□□□□ 0.1
VPS37C-204ENST00000538036 LRRC59Q96AG4 307 aaKnown RBP15.7■□□□□ 0.1
VPS37C-204ENST00000538036 CDK12Q9NYV4 1490 aaPredicted RBP15.7■□□□□ 0.1
VPS37C-204ENST00000538036 SETD5Q9C0A6 1442 aa15.69■□□□□ 0.1
VPS37C-204ENST00000538036 IQGAP3Q86VI3 1631 aa15.69■□□□□ 0.1
VPS37C-204ENST00000538036 SETD1AO15047 1707 aaKnown RBP15.68■□□□□ 0.1
VPS37C-204ENST00000538036 NUTM2BA6NNL0 878 aaPredicted RBP15.68■□□□□ 0.1
VPS37C-204ENST00000538036 NUTM2EB1AL46 878 aaPredicted RBP15.68■□□□□ 0.1
VPS37C-204ENST00000538036 NUTM2AQ8IVF1 878 aaPredicted RBP15.68■□□□□ 0.1
VPS37C-204ENST00000538036 AFF2P51816 1311 aa15.66■□□□□ 0.1
VPS37C-204ENST00000538036 ASXL1Q8IXJ9 1541 aa15.65■□□□□ 0.1
VPS37C-204ENST00000538036 ZNF326Q5BKZ1 582 aaKnown RBP15.65■□□□□ 0.1
VPS37C-204ENST00000538036 MST1RQ04912 1400 aa15.65■□□□□ 0.1
VPS37C-204ENST00000538036 SETBP1Q9Y6X0 1596 aa15.65■□□□□ 0.1
VPS37C-204ENST00000538036 RBM6P78332 1123 aaKnown RBP15.63■□□□□ 0.09
VPS37C-204ENST00000538036 XRN1Q8IZH2 1706 aaKnown RBP15.63■□□□□ 0.09
VPS37C-204ENST00000538036 METP08581 1390 aa15.62■□□□□ 0.09
VPS37C-204ENST00000538036 QTRT2Q9H974 415 aaKnown RBP15.62■□□□□ 0.09
VPS37C-204ENST00000538036 ADGRL3Q9HAR2 1447 aa15.61■□□□□ 0.09
VPS37C-204ENST00000538036 C8orf37Q96NL8 207 aa15.6■□□□□ 0.09
VPS37C-204ENST00000538036 NRXN3Q9Y4C0 1643 aa15.6■□□□□ 0.09
VPS37C-204ENST00000538036 PNPLA6Q8IY17 1366 aa15.6■□□□□ 0.09
VPS37C-204ENST00000538036 ITGAEP38570 1179 aa15.59■□□□□ 0.09
VPS37C-204ENST00000538036 NGLY1Q96IV0 654 aa15.59■□□□□ 0.09
VPS37C-204ENST00000538036 NHSL1Q5SYE7 1610 aa15.58■□□□□ 0.09
VPS37C-204ENST00000538036 VGFO15240 615 aaPredicted RBP15.57■□□□□ 0.08
VPS37C-204ENST00000538036 DDX17Q92841 729 aaKnown RBP15.56■□□□□ 0.08
VPS37C-204ENST00000538036 SPHKAPQ2M3C7 1700 aa15.55■□□□□ 0.08
VPS37C-204ENST00000538036 C1orf167Q5SNV9 1468 aa15.55■□□□□ 0.08
VPS37C-204ENST00000538036 SOS2Q07890 1332 aaPredicted RBP15.55■□□□□ 0.08
VPS37C-204ENST00000538036 RGS12O14924 1447 aa15.54■□□□□ 0.08
VPS37C-204ENST00000538036 PTCH1Q13635 1447 aa15.53■□□□□ 0.08
VPS37C-204ENST00000538036 RPGRIP1LQ68CZ1 1315 aa15.53■□□□□ 0.08
VPS37C-204ENST00000538036 ADAMTS2O95450 1211 aa15.53■□□□□ 0.08
VPS37C-204ENST00000538036 FOXD1Q16676 465 aa15.53■□□□□ 0.08
VPS37C-204ENST00000538036 NEXMIFQ5QGS0 1516 aa15.53■□□□□ 0.08
VPS37C-204ENST00000538036 FNBP4Q8N3X1 1017 aaPredicted RBP15.52■□□□□ 0.08
VPS37C-204ENST00000538036 USP21Q9UK80 565 aa15.52■□□□□ 0.08
VPS37C-204ENST00000538036 TRPC5Q9UL62 973 aaPredicted RBP15.52■□□□□ 0.08
VPS37C-204ENST00000538036 PRAG1Q86YV5 1406 aa15.51■□□□□ 0.07
VPS37C-204ENST00000538036 ATAD2Q6PL18 1390 aa15.51■□□□□ 0.07
VPS37C-204ENST00000538036 ORAI2Q96SN7 254 aa15.51■□□□□ 0.07
VPS37C-204ENST00000538036 LAMC1P11047 1609 aa15.5■□□□□ 0.07
VPS37C-204ENST00000538036 ROBO2Q9HCK4 1378 aa15.49■□□□□ 0.07
VPS37C-204ENST00000538036 NALCNQ8IZF0 1738 aa15.49■□□□□ 0.07
VPS37C-204ENST00000538036 CLTCL1P53675 1640 aa15.49■□□□□ 0.07
VPS37C-204ENST00000538036 HFM1A2PYH4 1435 aa15.49■□□□□ 0.07
VPS37C-204ENST00000538036 CCDC125Q86Z20 511 aa15.47■□□□□ 0.07
VPS37C-204ENST00000538036 NPHP3Q7Z494 1330 aa15.46■□□□□ 0.07
VPS37C-204ENST00000538036 NAIPQ13075 1403 aa15.45■□□□□ 0.06
VPS37C-204ENST00000538036 KIF1BO60333 1816 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms