RNA–Protein interactions for RNA: ENST00000537986.1

CCDC189-203, Transcript of coiled-coil domain containing 189, humanhuman

TSL 2

Gene CCDC189, Length 496 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189-203ENST00000537986 NWD1Q149M9 1564 aa17.28■□□□□ 0.36
CCDC189-203ENST00000537986 TMEM94Q12767 1356 aa17.28■□□□□ 0.36
CCDC189-203ENST00000537986 ROBO1Q9Y6N7 1651 aa17.27■□□□□ 0.36
CCDC189-203ENST00000537986 TMEM131LA2VDJ0 1609 aa17.27■□□□□ 0.36
CCDC189-203ENST00000537986 IQGAP3Q86VI3 1631 aa17.27■□□□□ 0.36
CCDC189-203ENST00000537986 NKTRP30414 1462 aaKnown RBP17.26■□□□□ 0.35
CCDC189-203ENST00000537986 CHGAP10645 457 aaKnown RBP17.26■□□□□ 0.35
CCDC189-203ENST00000537986 KCNA6P17658 529 aa17.26■□□□□ 0.35
CCDC189-203ENST00000537986 PROSER2Q86WR7 435 aaPredicted RBP17.26■□□□□ 0.35
CCDC189-203ENST00000537986 ITGAEP38570 1179 aa17.25■□□□□ 0.35
CCDC189-203ENST00000537986 CHD2O14647 1828 aaKnown RBP17.25■□□□□ 0.35
CCDC189-203ENST00000537986 RIMS2Q9UQ26 1411 aa17.24■□□□□ 0.35
CCDC189-203ENST00000537986 HDGFP51858 240 aaKnown RBP17.24■□□□□ 0.35
CCDC189-203ENST00000537986 RBM33Q96EV2 1170 aaKnown RBP17.24■□□□□ 0.35
CCDC189-203ENST00000537986 ROCK1Q13464 1354 aa17.23■□□□□ 0.35
CCDC189-203ENST00000537986 ZFYVE9O95405 1425 aa17.22■□□□□ 0.35
CCDC189-203ENST00000537986 MSH6P52701 1360 aa17.22■□□□□ 0.35
CCDC189-203ENST00000537986 PLEKHG1Q9ULL1 1385 aa17.22■□□□□ 0.35
CCDC189-203ENST00000537986 PHLPP1O60346 1717 aa17.21■□□□□ 0.35
CCDC189-203ENST00000537986 PPARGC1BQ86YN6 1023 aaKnown RBP17.2■□□□□ 0.34
CCDC189-203ENST00000537986 SPHKAPQ2M3C7 1700 aa17.2■□□□□ 0.34
CCDC189-203ENST00000537986 FAM135BQ49AJ0 1406 aa17.2■□□□□ 0.34
CCDC189-203ENST00000537986 NUP155O75694 1391 aa17.18■□□□□ 0.34
CCDC189-203ENST00000537986 C14orf37Q86TY3 774 aa17.18■□□□□ 0.34
CCDC189-203ENST00000537986 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.18■□□□□ 0.34
CCDC189-203ENST00000537986 DIP2AQ14689 1571 aa17.18■□□□□ 0.34
CCDC189-203ENST00000537986 NUTM2DQ5VT03 806 aaPredicted RBP17.17■□□□□ 0.34
CCDC189-203ENST00000537986 TRPM2O94759 1503 aa17.14■□□□□ 0.33
CCDC189-203ENST00000537986 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.12■□□□□ 0.33
CCDC189-203ENST00000537986 SLAIN2Q9P270 581 aa17.11■□□□□ 0.33
CCDC189-203ENST00000537986 TBX22Q9Y458 520 aa17.11■□□□□ 0.33
CCDC189-203ENST00000537986 KIF1BO60333 1816 aa17.1■□□□□ 0.33
CCDC189-203ENST00000537986 ADAMTS13Q76LX8 1427 aa17.1■□□□□ 0.33
CCDC189-203ENST00000537986 ZNF326Q5BKZ1 582 aaKnown RBP17.09■□□□□ 0.33
CCDC189-203ENST00000537986 NCOA3Q9Y6Q9 1424 aa17.07■□□□□ 0.32
CCDC189-203ENST00000537986 PIK3R4Q99570 1358 aa17.07■□□□□ 0.32
CCDC189-203ENST00000537986 CLTCL1P53675 1640 aa17.07■□□□□ 0.32
CCDC189-203ENST00000537986 COL16A1Q07092 1604 aaPredicted RBP17.07■□□□□ 0.32
CCDC189-203ENST00000537986 NRXN3Q9Y4C0 1643 aa17.07■□□□□ 0.32
CCDC189-203ENST00000537986 ATF3P18847 181 aa17.06■□□□□ 0.32
CCDC189-203ENST00000537986 JCADQ9P266 1359 aa17.05■□□□□ 0.32
CCDC189-203ENST00000537986 XRN1Q8IZH2 1706 aaKnown RBP17.04■□□□□ 0.32
CCDC189-203ENST00000537986 SETBP1Q9Y6X0 1596 aa17.04■□□□□ 0.32
CCDC189-203ENST00000537986 CADPS2Q86UW7 1296 aa17.04■□□□□ 0.32
CCDC189-203ENST00000537986 RGS17Q9UGC6 210 aaPredicted RBP17.04■□□□□ 0.32
CCDC189-203ENST00000537986 AMOTL2Q9Y2J4 779 aa17.03■□□□□ 0.32
CCDC189-203ENST00000537986 C19orf44Q9H6X5 657 aa17.02■□□□□ 0.32
CCDC189-203ENST00000537986 SHPRHQ149N8 1683 aa17.01■□□□□ 0.31
CCDC189-203ENST00000537986 AHDC1Q5TGY3 1603 aaPredicted RBP17.01■□□□□ 0.31
CCDC189-203ENST00000537986 MEX3CQ5U5Q3 659 aaKnown RBP17.01■□□□□ 0.31
CCDC189-203ENST00000537986 PTPRUQ92729 1446 aa17.01■□□□□ 0.31
CCDC189-203ENST00000537986 RRBP1Q9P2E9 1410 aaKnown RBP17.01■□□□□ 0.31
CCDC189-203ENST00000537986 SETD1AO15047 1707 aaKnown RBP17.01■□□□□ 0.31
CCDC189-203ENST00000537986 NEXMIFQ5QGS0 1516 aa17■□□□□ 0.31
CCDC189-203ENST00000537986 NAIPQ13075 1403 aa16.99■□□□□ 0.31
CCDC189-203ENST00000537986 POTEAQ6S8J7 498 aa16.99■□□□□ 0.31
CCDC189-203ENST00000537986 TRIM52Q96A61 297 aa16.98■□□□□ 0.31
CCDC189-203ENST00000537986 NALCNQ8IZF0 1738 aa16.98■□□□□ 0.31
CCDC189-203ENST00000537986 DCCP43146 1447 aa16.97■□□□□ 0.31
CCDC189-203ENST00000537986 ASXL1Q8IXJ9 1541 aa16.96■□□□□ 0.3
CCDC189-203ENST00000537986 SPATA31A6Q5VVP1 1343 aa16.96■□□□□ 0.3
CCDC189-203ENST00000537986 METP08581 1390 aa16.95■□□□□ 0.3
CCDC189-203ENST00000537986 LRP6O75581 1613 aa16.95■□□□□ 0.3
CCDC189-203ENST00000537986 NHSL1Q5SYE7 1610 aa16.94■□□□□ 0.3
CCDC189-203ENST00000537986 PPLO60437 1756 aa16.93■□□□□ 0.3
CCDC189-203ENST00000537986 BRINP3Q76B58 766 aa16.93■□□□□ 0.3
CCDC189-203ENST00000537986 HFM1A2PYH4 1435 aa16.93■□□□□ 0.3
CCDC189-203ENST00000537986 ADGRL3Q9HAR2 1447 aa16.92■□□□□ 0.3
CCDC189-203ENST00000537986 MST1RQ04912 1400 aa16.91■□□□□ 0.3
CCDC189-203ENST00000537986 NUTM2BA6NNL0 878 aaPredicted RBP16.9■□□□□ 0.3
CCDC189-203ENST00000537986 NUTM2EB1AL46 878 aaPredicted RBP16.9■□□□□ 0.3
CCDC189-203ENST00000537986 NUTM2AQ8IVF1 878 aaPredicted RBP16.9■□□□□ 0.3
CCDC189-203ENST00000537986 SLC4A1APQ9BWU0 796 aaKnown RBP16.9■□□□□ 0.3
CCDC189-203ENST00000537986 ZNF772Q68DY9 489 aaPredicted RBP16.89■□□□□ 0.29
CCDC189-203ENST00000537986 VGFO15240 615 aaPredicted RBP16.88■□□□□ 0.29
CCDC189-203ENST00000537986 PTCH1Q13635 1447 aa16.86■□□□□ 0.29
CCDC189-203ENST00000537986 SETD5Q9C0A6 1442 aa16.85■□□□□ 0.29
CCDC189-203ENST00000537986 LRRC59Q96AG4 307 aaKnown RBP16.84■□□□□ 0.29
CCDC189-203ENST00000537986 RPGRIP1LQ68CZ1 1315 aa16.83■□□□□ 0.28
CCDC189-203ENST00000537986 C1orf167Q5SNV9 1468 aa16.82■□□□□ 0.28
CCDC189-203ENST00000537986 CCDC144AA2RUR9 1427 aa16.82■□□□□ 0.28
CCDC189-203ENST00000537986 DDX17Q92841 729 aaKnown RBP16.82■□□□□ 0.28
CCDC189-203ENST00000537986 IFT172Q9UG01 1749 aa16.82■□□□□ 0.28
CCDC189-203ENST00000537986 ROBO2Q9HCK4 1378 aa16.81■□□□□ 0.28
CCDC189-203ENST00000537986 FOXD1Q16676 465 aa16.81■□□□□ 0.28
CCDC189-203ENST00000537986 PNPLA6Q8IY17 1366 aa16.8■□□□□ 0.28
CCDC189-203ENST00000537986 AFF2P51816 1311 aa16.8■□□□□ 0.28
CCDC189-203ENST00000537986 RXRBP28702 533 aa16.8■□□□□ 0.28
CCDC189-203ENST00000537986 C8orf37Q96NL8 207 aa16.8■□□□□ 0.28
CCDC189-203ENST00000537986 LAMC1P11047 1609 aa16.79■□□□□ 0.28
CCDC189-203ENST00000537986 CDC42BPGQ6DT37 1551 aa16.77■□□□□ 0.28
CCDC189-203ENST00000537986 PRAG1Q86YV5 1406 aa16.77■□□□□ 0.27
CCDC189-203ENST00000537986 RGL3Q3MIN7 710 aa16.76■□□□□ 0.27
CCDC189-203ENST00000537986 KNDC1Q76NI1 1749 aa16.76■□□□□ 0.27
CCDC189-203ENST00000537986 ADAMTS2O95450 1211 aa16.75■□□□□ 0.27
CCDC189-203ENST00000537986 ORAI2Q96SN7 254 aa16.75■□□□□ 0.27
CCDC189-203ENST00000537986 CDK12Q9NYV4 1490 aaPredicted RBP16.73■□□□□ 0.27
CCDC189-203ENST00000537986 NGLY1Q96IV0 654 aa16.73■□□□□ 0.27
CCDC189-203ENST00000537986 MPHOSPH9Q99550 1183 aa16.73■□□□□ 0.27
CCDC189-203ENST00000537986 STK26Q9P289 416 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms