RNA–Protein interactions for RNA: ENST00000537634.1

CHD4-207, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 691 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-207ENST00000537634 TMEM131LA2VDJ0 1609 aa14.84□□□□□ -0.03
CHD4-207ENST00000537634 BCANQ96GW7 911 aa14.83□□□□□ -0.04
CHD4-207ENST00000537634 NWD1Q149M9 1564 aa14.82□□□□□ -0.04
CHD4-207ENST00000537634 PPP1R15AO75807 674 aaPredicted RBP14.82□□□□□ -0.04
CHD4-207ENST00000537634 KCNA6P17658 529 aa14.82□□□□□ -0.04
CHD4-207ENST00000537634 PPARGC1BQ86YN6 1023 aaKnown RBP14.82□□□□□ -0.04
CHD4-207ENST00000537634 ZFYVE9O95405 1425 aa14.82□□□□□ -0.04
CHD4-207ENST00000537634 NKTRP30414 1462 aaKnown RBP14.82□□□□□ -0.04
CHD4-207ENST00000537634 TMEM94Q12767 1356 aa14.81□□□□□ -0.04
CHD4-207ENST00000537634 RIMS2Q9UQ26 1411 aa14.81□□□□□ -0.04
CHD4-207ENST00000537634 HDGFP51858 240 aaKnown RBP14.8□□□□□ -0.04
CHD4-207ENST00000537634 NUP155O75694 1391 aa14.8□□□□□ -0.04
CHD4-207ENST00000537634 PLEKHG1Q9ULL1 1385 aa14.8□□□□□ -0.04
CHD4-207ENST00000537634 CHGAP10645 457 aaKnown RBP14.79□□□□□ -0.04
CHD4-207ENST00000537634 PROSER2Q86WR7 435 aaPredicted RBP14.79□□□□□ -0.04
CHD4-207ENST00000537634 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.77□□□□□ -0.05
CHD4-207ENST00000537634 PHF23Q9BUL5 403 aaPredicted RBP14.77□□□□□ -0.05
CHD4-207ENST00000537634 CHD2O14647 1828 aaKnown RBP14.77□□□□□ -0.05
CHD4-207ENST00000537634 FAM135BQ49AJ0 1406 aa14.75□□□□□ -0.05
CHD4-207ENST00000537634 DIP2AQ14689 1571 aa14.75□□□□□ -0.05
CHD4-207ENST00000537634 SPHKAPQ2M3C7 1700 aa14.75□□□□□ -0.05
CHD4-207ENST00000537634 ROBO1Q9Y6N7 1651 aa14.74□□□□□ -0.05
CHD4-207ENST00000537634 MSH6P52701 1360 aa14.74□□□□□ -0.05
CHD4-207ENST00000537634 RBM33Q96EV2 1170 aaKnown RBP14.74□□□□□ -0.05
CHD4-207ENST00000537634 RRBP1Q9P2E9 1410 aaKnown RBP14.73□□□□□ -0.05
CHD4-207ENST00000537634 NUTM2DQ5VT03 806 aaPredicted RBP14.72□□□□□ -0.05
CHD4-207ENST00000537634 TBX22Q9Y458 520 aa14.72□□□□□ -0.05
CHD4-207ENST00000537634 ADAMTS13Q76LX8 1427 aa14.71□□□□□ -0.05
CHD4-207ENST00000537634 TRPM2O94759 1503 aa14.7□□□□□ -0.06
CHD4-207ENST00000537634 PIK3R4Q99570 1358 aa14.69□□□□□ -0.06
CHD4-207ENST00000537634 C14orf37Q86TY3 774 aa14.68□□□□□ -0.06
CHD4-207ENST00000537634 NAIPQ13075 1403 aa14.67□□□□□ -0.06
CHD4-207ENST00000537634 NCOA3Q9Y6Q9 1424 aa14.67□□□□□ -0.06
CHD4-207ENST00000537634 CLTCL1P53675 1640 aa14.66□□□□□ -0.06
CHD4-207ENST00000537634 PHLPP1O60346 1717 aa14.66□□□□□ -0.06
CHD4-207ENST00000537634 SLAIN2Q9P270 581 aa14.66□□□□□ -0.06
CHD4-207ENST00000537634 NRXN3Q9Y4C0 1643 aa14.66□□□□□ -0.06
CHD4-207ENST00000537634 SETBP1Q9Y6X0 1596 aa14.65□□□□□ -0.06
CHD4-207ENST00000537634 ZNF326Q5BKZ1 582 aaKnown RBP14.65□□□□□ -0.06
CHD4-207ENST00000537634 KIF1BO60333 1816 aa14.64□□□□□ -0.07
CHD4-207ENST00000537634 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.64□□□□□ -0.07
CHD4-207ENST00000537634 HFM1A2PYH4 1435 aa14.63□□□□□ -0.07
CHD4-207ENST00000537634 XRN1Q8IZH2 1706 aaKnown RBP14.63□□□□□ -0.07
CHD4-207ENST00000537634 NEXMIFQ5QGS0 1516 aa14.62□□□□□ -0.07
CHD4-207ENST00000537634 CADPS2Q86UW7 1296 aa14.62□□□□□ -0.07
CHD4-207ENST00000537634 PTPRUQ92729 1446 aa14.62□□□□□ -0.07
CHD4-207ENST00000537634 AMOTL2Q9Y2J4 779 aa14.62□□□□□ -0.07
CHD4-207ENST00000537634 ATF3P18847 181 aa14.61□□□□□ -0.07
CHD4-207ENST00000537634 TRIM52Q96A61 297 aa14.61□□□□□ -0.07
CHD4-207ENST00000537634 C19orf44Q9H6X5 657 aa14.61□□□□□ -0.07
CHD4-207ENST00000537634 COL16A1Q07092 1604 aaPredicted RBP14.6□□□□□ -0.07
CHD4-207ENST00000537634 JCADQ9P266 1359 aa14.6□□□□□ -0.07
CHD4-207ENST00000537634 DCCP43146 1447 aa14.58□□□□□ -0.07
CHD4-207ENST00000537634 RGS17Q9UGC6 210 aaPredicted RBP14.58□□□□□ -0.08
CHD4-207ENST00000537634 AHDC1Q5TGY3 1603 aaPredicted RBP14.58□□□□□ -0.08
CHD4-207ENST00000537634 METP08581 1390 aa14.57□□□□□ -0.08
CHD4-207ENST00000537634 SLC4A1APQ9BWU0 796 aaKnown RBP14.56□□□□□ -0.08
CHD4-207ENST00000537634 SHPRHQ149N8 1683 aa14.54□□□□□ -0.08
CHD4-207ENST00000537634 NALCNQ8IZF0 1738 aa14.53□□□□□ -0.08
CHD4-207ENST00000537634 ASXL1Q8IXJ9 1541 aa14.53□□□□□ -0.08
CHD4-207ENST00000537634 ADGRL3Q9HAR2 1447 aa14.53□□□□□ -0.08
CHD4-207ENST00000537634 VGFO15240 615 aaPredicted RBP14.53□□□□□ -0.08
CHD4-207ENST00000537634 PPLO60437 1756 aa14.52□□□□□ -0.08
CHD4-207ENST00000537634 SETD1AO15047 1707 aaKnown RBP14.52□□□□□ -0.08
CHD4-207ENST00000537634 MST1RQ04912 1400 aa14.52□□□□□ -0.08
CHD4-207ENST00000537634 SPATA31A6Q5VVP1 1343 aa14.52□□□□□ -0.08
CHD4-207ENST00000537634 BRINP3Q76B58 766 aa14.52□□□□□ -0.09
CHD4-207ENST00000537634 RPGRIP1LQ68CZ1 1315 aa14.51□□□□□ -0.09
CHD4-207ENST00000537634 POTEAQ6S8J7 498 aa14.51□□□□□ -0.09
CHD4-207ENST00000537634 LRP6O75581 1613 aa14.51□□□□□ -0.09
CHD4-207ENST00000537634 PTCH1Q13635 1447 aa14.5□□□□□ -0.09
CHD4-207ENST00000537634 MEX3CQ5U5Q3 659 aaKnown RBP14.5□□□□□ -0.09
CHD4-207ENST00000537634 NHSL1Q5SYE7 1610 aa14.5□□□□□ -0.09
CHD4-207ENST00000537634 CCDC144AA2RUR9 1427 aa14.49□□□□□ -0.09
CHD4-207ENST00000537634 FOXD1Q16676 465 aa14.48□□□□□ -0.09
CHD4-207ENST00000537634 PRAG1Q86YV5 1406 aa14.47□□□□□ -0.09
CHD4-207ENST00000537634 SETD5Q9C0A6 1442 aa14.46□□□□□ -0.09
CHD4-207ENST00000537634 ROBO2Q9HCK4 1378 aa14.46□□□□□ -0.1
CHD4-207ENST00000537634 IFT172Q9UG01 1749 aa14.44□□□□□ -0.1
CHD4-207ENST00000537634 ZNF772Q68DY9 489 aaPredicted RBP14.44□□□□□ -0.1
CHD4-207ENST00000537634 C1orf167Q5SNV9 1468 aa14.44□□□□□ -0.1
CHD4-207ENST00000537634 NUTM2BA6NNL0 878 aaPredicted RBP14.43□□□□□ -0.1
CHD4-207ENST00000537634 NUTM2EB1AL46 878 aaPredicted RBP14.43□□□□□ -0.1
CHD4-207ENST00000537634 NUTM2AQ8IVF1 878 aaPredicted RBP14.43□□□□□ -0.1
CHD4-207ENST00000537634 LRRC59Q96AG4 307 aaKnown RBP14.43□□□□□ -0.1
CHD4-207ENST00000537634 MPHOSPH9Q99550 1183 aa14.43□□□□□ -0.1
CHD4-207ENST00000537634 SPATA31E1Q6ZUB1 1445 aa14.42□□□□□ -0.1
CHD4-207ENST00000537634 ANKRD30BQ9BXX2 1392 aa14.42□□□□□ -0.1
CHD4-207ENST00000537634 ACIN1Q9UKV3 1341 aaKnown RBP14.41□□□□□ -0.1
CHD4-207ENST00000537634 LAMC1P11047 1609 aa14.41□□□□□ -0.1
CHD4-207ENST00000537634 RGL3Q3MIN7 710 aa14.41□□□□□ -0.1
CHD4-207ENST00000537634 DDX17Q92841 729 aaKnown RBP14.41□□□□□ -0.1
CHD4-207ENST00000537634 ADGRF5Q8IZF2 1346 aa14.41□□□□□ -0.1
CHD4-207ENST00000537634 CDC42BPGQ6DT37 1551 aa14.4□□□□□ -0.1
CHD4-207ENST00000537634 PNPLA6Q8IY17 1366 aa14.4□□□□□ -0.1
CHD4-207ENST00000537634 KNDC1Q76NI1 1749 aa14.38□□□□□ -0.11
CHD4-207ENST00000537634 ORAI2Q96SN7 254 aa14.37□□□□□ -0.11
CHD4-207ENST00000537634 TECPR2O15040 1411 aa14.37□□□□□ -0.11
CHD4-207ENST00000537634 PIK3C2GO75747 1445 aa14.37□□□□□ -0.11
CHD4-207ENST00000537634 AFF2P51816 1311 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms